Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq8 125 6e-24 seq6 125 6e-24 seq2 118 1e-21 seq5 116 3e-21 seq4 116 3e-21 seq9 86.0 6e-12 seq7 82.4 7e-11 seq3 82.4 7e-11 >seq1 Length=36915442 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || || Sbjct 10946959 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 10947018 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 10947019 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 10947077 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||||||| || ||||||| || |||| Sbjct 10947078 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 10947137 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 10947138 CGAAGATCTGCAT 10947150 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||||||| || ||| |||| || Sbjct 21234733 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 21234674 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || || | |||||||||||||| || | | |||||||||| Sbjct 21234673 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21234614 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| ||| | | | ||||||||| |||||||||| |||||| || || Sbjct 21234613 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21234554 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || ||||| || |||||||| Sbjct 21234553 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || ||| |||| ||||||||||| || || || Sbjct 21238841 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 21238782 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| || || |||| |||| |||| |||| | ||| | | Sbjct 21238781 GATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTT 21238722 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | |||| ||||| || ||| | | |||||| || | || ||| || ||||| Sbjct 21238721 CTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCAC 21238662 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 21238661 GAATATCTGCAT 21238650 >seq8 Length=22678724 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | ||| || | || || |||||||| || ||||| Sbjct 3995728 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCAAA 3995787 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||| ||| |||||| ||||| | | Sbjct 3995788 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTCACATT 3995847 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| | || || |||| |||||||| Sbjct 3995848 GTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 3995907 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3995908 AAAGATCTGCAT 3995919 Score = 120 bits (132), Expect = 3e-22 Identities = 148/201 (74%), Gaps = 10/201 (5%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTT-CGCTCGTCGTCCAGCTGCTTACCCGCAA 35603 ||| || ||||| ||||| || || |||||| || | || || ||||||||||| || | Sbjct 3985246 CTCTTTCTGAATTTTGTAGTCAGC-AAGGTTGCGTCCTTCCTCGAGCTGCTTACCGGCGA 3985304 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT--------TG 35655 | || | ||||||||||||| ||||| || |||||||||| ||||||| || Sbjct 3985305 AGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTACCTTCACTG 3985364 Query 35656 CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAA 35715 ||||| | | | | |||||| || |||||||| | ||||| | || || |||| Sbjct 3985365 CTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGACTTGCCGGTCAG 3985424 Query 35716 AGTTTTCACAAATATCTGCAT 35736 ||| |||||||| |||||||| Sbjct 3985425 AGTCTTCACAAAGATCTGCAT 3985445 >seq6 Length=25711811 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| |||||||||||||| ||| Sbjct 22963774 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 22963833 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| || | ||||||||||||| ||| Sbjct 22963834 AGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 22963893 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| ||||| ||||| | | | | | |||| || || ||| Sbjct 22963894 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACC 22963953 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || ||||| || |||||||| |||||||| Sbjct 22963954 TCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 22964000 Score = 125 bits (138), Expect = 6e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || ||||||||||| ||||| Sbjct 23416960 CTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAA 23416901 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | || |||||||||| |||||| ||||| || Sbjct 23416900 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 23416842 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | || || || || || |||| || |||| Sbjct 23416841 TGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCA 23416782 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 23416781 CGAAGATCTGCAT 23416769 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||||||| || | || ||||||||||| || || || Sbjct 23416732 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 23416673 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||||| || Sbjct 23416672 GATGAGACGCTGCTGGTCCGGGGGGATNCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 23416614 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | |||||| || || || |||| || || | Sbjct 23416613 TGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGA 23416554 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 23416553 CGAAGATCTGCAT 23416541 Score = 109 bits (120), Expect = 5e-19 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || | || || |||||||| || || || Sbjct 23416344 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 23416285 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 23416284 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 23416225 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 23416224 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 23416165 Query 35725 AAATATCTGCATTCTGTGCGCACACACA 35752 ||| ||||||| ||| ||||||||| Sbjct 23416164 AAAGATCTGCA-TCT----GCACACACA 23416142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || || ||||| || ||||| Sbjct 22964037 CTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAA 22964096 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | |||| || |||||||||| ||||| ||||| | | Sbjct 22964097 GATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 22964156 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||||| || || || || | || ||||| Sbjct 22964157 GTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 22964216 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 22964217 AAAGATCTGCA-TCTGT 22964232 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | ||||| |||||||| | ||| ||| || |||||||||||||| | Sbjct 21709541 TTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAG 21709482 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || || | || ||||| ||||| || || || |||| || |||||||| | | Sbjct 21709481 CTAATGTACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGG 21709422 Query 35628 GAACGCTCTCCTTGTCC 35644 ||| | ||| |||||| Sbjct 21709421 GAATACCCTCTTTGTCC 21709405 >seq2 Length=31686972 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || ||||||||||| || || || Sbjct 3056042 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 3056101 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 3056102 GATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 3056161 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| ||||| || || || ||||| || || Sbjct 3056162 ATCAATGGTGTCAGAGCTC---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTT 3056218 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 3056219 CACGAAGATCTGCAT 3056233 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || || || Sbjct 3056825 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3056884 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | || Sbjct 3056885 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3056943 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || || |||| ||| || | Sbjct 3056944 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGA 3057003 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 3057004 CAAAGATCTGCAT 3057016 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| || || Sbjct 3056235 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3056294 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || || | ||||||||||| | || Sbjct 3056295 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3056354 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||||| |||||| ||| | |||| | | ||||| |||| || Sbjct 3056355 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGCTC---TC 3056410 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | || || ||||| |||||||| Sbjct 3056411 AACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 >seq5 Length=24206129 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || || |||||||| || || || Sbjct 3088007 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3087948 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||||| || Sbjct 3087947 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3087889 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 3087888 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3087829 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3087828 CGAAGATCTGCAT 3087816 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 19881028 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAA 19880969 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||||| || Sbjct 19880968 AATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 19880910 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||| || || || || || | || |||| Sbjct 19880909 TGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 19880850 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 19880849 CAAAGATCTGCATTC 19880835 Score = 113 bits (124), Expect = 4e-20 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| |||| ||| |||||| ||||||||||| || || | ||| || | || || Sbjct 19881274 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 19881215 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| || || || | | ||||||||||| || | || |||||| ||| Sbjct 19881214 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 19881155 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||||| |||| | | ||||| |||| || ||||||| || || | Sbjct 19881154 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAG 19881099 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || || || | ||| || || || |||||||||| Sbjct 19881098 TCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATTC 19881063 Score = 102 bits (112), Expect = 7e-17 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || |||||||| || | || || |||||||| || || || Sbjct 7376931 CTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAA 7376990 Query 35605 TATCAA-CCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 || || || |||||||| || | | |||||| ||| ||||||| ||||| | Sbjct 7376991 GATAAAGACGATGCTGGTCAAGGGGGATACCCTCCTTATCCTGGATCTTTGCCTTCA-CG 7377049 Query 35664 TTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGAT-CGTTTTACCCGTCAAAGTTTT 35721 ||| | | |||||| || || ||||||| ||||| || || | ||||| || || Sbjct 7377050 TTGTCAATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGGTCTTTCTTGTCAAGGTCTT 7377109 Query 35722 CACAAATATCTGCATTC 35738 |||||| |||||||||| Sbjct 7377110 CACAAAGATCTGCATTC 7377126 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || || |||||||| || ||||| Sbjct 19880800 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 19880741 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||| ||||| | | || Sbjct 19880740 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC-TTTGCCTTAACGT 19880682 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||| || || || ||||| || || | Sbjct 19880681 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 19880622 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 19880621 CAAAGATTTGCAT 19880609 Score = 102 bits (112), Expect = 7e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| ||||||||||| ||||| | ||| || | || || Sbjct 19881502 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 19881443 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || |||| ||||||||||| | |||| | ||||||||| Sbjct 19881442 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 19881383 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | | | | || || |||| || ||||||| || || || Sbjct 19881382 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGT 19881326 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | ||| || || || |||||||| Sbjct 19881325 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || || | || ||| | || || |||||||| || || || Sbjct 19880571 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 19880512 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 19880511 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 19880452 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || || ||||| | || || || || || || | ||| |||||| Sbjct 19880451 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 19880392 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 19880391 AAGATCTGCAT 19880381 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || |||| ||| || |||| | |||| ||| || || || Sbjct 7376703 CTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTTGAGCTACTTGCCGGCGAA 7376762 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| ||||| ||||| | | Sbjct 7376763 GATGAGGCGCTGCTGGTCCGCGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATT 7376822 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||| || || || || || | || || || Sbjct 7376823 GTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTTTCCGGTTAGGGTCTTGAC 7376882 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 7376883 AAAAATCTGCAT 7376894 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/197 (70%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| || | ||| || |||| || || ||||| |||||||| Sbjct 7377161 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTGCCCGCAAA 7377220 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||| | |||| | |||||||||| ||||| ||| | | | Sbjct 7377221 GATGAGGCGCTGCTGGTTAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATT 7377280 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||| | || || || || || | || ||||| Sbjct 7377281 GTCAATCGTGTCAGAGGACTCAACC-------TTATGGTATTGCCAGTGAGTGTCTTCAC 7377333 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 7377334 AAAGATCTGCA-TCTGT 7377349 >seq4 Length=27574323 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || |||||||| || || || Sbjct 24792839 CTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 24792780 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 24792779 GATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 24792720 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| |||||||| || || || | || ||||| Sbjct 24792719 GTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCAC 24792660 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 24792659 AAAGATCTGCAT 24792648 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || || | ||| || | || || |||||||| || ||||| Sbjct 24792610 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 24792551 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 24792550 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 24792491 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||| || || ||||||| || || || || || || | || ||||| Sbjct 24792490 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 24792431 Query 35726 AATATCTGCAT 35736 ||||| ||||| Sbjct 24792430 AATATTTGCAT 24792420 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| || | || ||| | || || |||||||| || || || Sbjct 24792383 CTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAA 24792324 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | ||| | || |||||||||| ||||| ||||| | | Sbjct 24792323 GATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 24792264 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| ||| || || ||||||| ||||| || || || || | || || || Sbjct 24792263 GTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 24792204 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 24792203 GAATATCTGCAT 24792192 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||||| | ||| || | || || |||||||| || || || Sbjct 24793067 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 24793008 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || |||||| ||| |||||| ||||| || Sbjct 24793007 GATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCA-CGT 24792949 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || || || | || |||| Sbjct 24792948 TGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCA 24792889 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 24792888 CGAAGATCTGCAT 24792876 >seq9 Length=19219615 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||||| || ||| | || ||||||||||| || || || Sbjct 11939286 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 11939227 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||| ||||| || || | ||| | | ||||||||| Sbjct 11939226 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 11939187 >seq7 Length=24128185 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 14307906 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAA 14307965 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 14307966 GATCAGCCGCTGCTGGTCCG 14307985 >seq3 Length=33311619 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| || |||| ||||||||||| || || || Sbjct 6652674 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAA 6652733 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 6652734 GATCAGCCGCTGCTGGTCCG 6652753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793532380960