Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 136 4e-27 seq4 131 2e-25 seq6 116 4e-21 seq8 113 5e-20 seq1 111 2e-19 seq2 107 2e-18 seq9 84.2 2e-11 >seq5 Length=24206129 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | | | ||||| | ||||| ||||| || |||||||| | | Sbjct 7376440 CCACCACGGAGACGGAGCGCCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAACCTGCT 7376499 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| ||||| |||| ||||||||||| || || Sbjct 7376500 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGATCCGGGGGA 7376559 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| ||| ||| || ||| | |||||| ||||| || || Sbjct 7376560 ATGCCCTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCAATTGTGTCCGACGACTCAACC 7376619 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||||||||||| ||||| || || || || || ||||||||| Sbjct 7376620 TCCAAGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 7376667 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || ||||| ||||| || |||||||||||| | Sbjct 3088042 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3087983 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || || | |||||||| || || || Sbjct 3087982 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3087923 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || || || ||| | ||||| || || ||||| Sbjct 3087922 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3087863 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || || || | || || ||||| || ||||| ||| Sbjct 3087862 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3087812 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || || | || ||||| || ||||| ||||| || ||||||||||| Sbjct 19880837 TTCCTCCCCTTAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 19880778 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | || |||||||| ||||| ||||| |||| ||||||||| || || | Sbjct 19880777 CAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGG 19880718 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || || ||| || || ||| | || || || || || | Sbjct 19880717 GAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAA 19880658 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || || || || || || || || || |||||||| Sbjct 19880657 CCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19880609 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || || || |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 19881065 TTCCACCCCTTAGGCGCAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 19881006 Query 134545 CAACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | ||| || | || || ||||| ||||| |||||||| | ||||||||| || || Sbjct 19881005 CGAGGGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGG 19880947 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || || || || || || || ||| | ||||| || || || Sbjct 19880946 GGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCTGATGACTCA 19880887 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || |||||||| || || || | || || || || || |||||| Sbjct 19880886 ACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATT 19880836 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || || || ||||| ||||||||||||||| | Sbjct 19881519 CCACCCCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCG 19881460 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || || |||| |||||||| || || || Sbjct 19881459 AGGGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 19881400 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || || || ||| | || ||||| || || Sbjct 19881399 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACC 19881340 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||||||||| || || || | ||| || ||||| || ||||| Sbjct 19881339 TCCAGAGTAATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || ||||| || ||||||||||| || ||||||||||| || Sbjct 19880607 CCTCCCCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCA 19880548 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || || | ||||||||| || || || Sbjct 19880547 AGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 19880488 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | || || || || || || Sbjct 19880487 ATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACC 19880428 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| || || || || ||||| Sbjct 19880427 TCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 19880381 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| | |||||| || || ||||| |||||||||||||| || Sbjct 19881291 CCACCCCTGAGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCA 19881232 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || || | | |||||| || || || Sbjct 19881231 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGG 19881172 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||| || || || Sbjct 19881171 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACC 19881112 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| || || || || | ||| || |||||||| |||||| Sbjct 19881111 TCCAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 19881064 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 ||||| || || | | ||| ||||| || ||||| || || ||||||||||||| |||| Sbjct 7376896 CCTCCCCTCAGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCC 7376955 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAA-ACGCTGCTGATCGGGCG 134604 || ||| || || || ||||| ||||| || || || || ||| ||||| || | | Sbjct 7376956 AA-GGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAAGACGATGCTGGTCAAGGG 7377014 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || || ||| || || ||| | ||||| || || || | Sbjct 7377015 GGATACCCTCCTTATCCTGGATCTTTGCCTTCACGTTGTCAATCGTGTCTGAGGACTCAA 7377074 Query 134665 CGTCGAGAGTAAT-GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| || ||| || | || || || || || || || |||||| Sbjct 7377075 CCTCCAAAGTGATGGGTCTTTCTTGTCAAGGTCTTCACAAAGATCTGCATT 7377125 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| ||||| || | || ||||| || ||||| || || ||||||||||| || Sbjct 7377124 TTCCTCCCCTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTG 7377183 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | |||| | ||| || || || ||||| ||||| || | |||||||| | || | Sbjct 7377184 CGAGGGTGCGTCCGTCCTCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTTAGGTG 7377243 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || ||||| || ||||| ||| | ||||| || || || | Sbjct 7377244 GAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAA 7377303 Query 134665 C 134665 | Sbjct 7377304 C 7377304 >seq4 Length=27574323 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || ||||| || |||||||||||||| ||||||||||| || Sbjct 24792646 CCGCCCCGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCA 24792587 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || ||||| || | ||||||||| || || || Sbjct 24792586 AGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 24792527 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || || | |||||||| || || || Sbjct 24792526 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACC 24792467 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || ||||| | || || ||||| |||||||| Sbjct 24792466 TCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 24792420 >seq6 Length=25711811 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || || ||||| || |||||||| || || Sbjct 23416995 CCACCACGGAGGCGGAGCACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCCGCA 23416936 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||| ||||||||| || || || Sbjct 23416935 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 23416876 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||||||||| || || Sbjct 23416875 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACC 23416816 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || || || | || || ||||| || ||||| Sbjct 23416815 TCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 23416769 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 ||||| ||||| || |||||||||||| | | |||| | || || ||||| ||||| Sbjct 23416349 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23416290 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || || | ||||||||| || || || ||||| || || || || || || ||| Sbjct 23416289 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 23416230 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | ||||| || || || || ||||| || ||||| || ||||| | || Sbjct 23416229 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 23416170 Query 134697 TTAACGAAAATTTGCAT 134713 || || || || ||||| Sbjct 23416169 TTCACAAAGATCTGCAT 23416153 Score = 104 bits (114), Expect = 2e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || ||||| | | || ||||| || ||||| ||||| || ||||||||||| ||| Sbjct 23416767 CCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 23416708 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | || || ||||| ||||| || || || | ||||||||| || || || Sbjct 23416707 AA-GGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 23416649 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || || || || ||| | ||||| || || || || Sbjct 23416648 GATNCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGAC 23416589 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || ||||| || ||||| Sbjct 23416588 CTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 23416541 Score = 100 bits (110), Expect = 3e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | ||| ||||| | ||||| ||||| ||||||||||| || ||| Sbjct 22963774 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 22963833 Query 134546 AACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || |||||||| ||||||||||| || | |||||||| || || Sbjct 22963834 A---GTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGG 22963890 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || ||||| || || || ||| | |||| || || || Sbjct 22963891 GGAATTCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCG 22963950 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || || || || || || || || || ||||| Sbjct 22963951 ACCTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 22964000 >seq8 Length=22678724 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || || || ||||| |||||||||||||| || Sbjct 3995693 CCACCACGGAGACGGAGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCA 3995752 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| ||||| || | |||||||| || || || Sbjct 3995753 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 3995812 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | |||||||| || ||||| Sbjct 3995813 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGACTCCACC 3995872 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||| || ||||| | ||||| || || || ||||| Sbjct 3995873 TCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 3995919 >seq1 Length=36915442 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || || ||||| || |||||||||||| | Sbjct 10946924 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 10946983 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || || || | |||||||| |||||||| Sbjct 10946984 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 10947043 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | ||||| || || ||||| Sbjct 10947044 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 10947103 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || || || || | || || ||||| || ||||| ||| Sbjct 10947104 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 10947154 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| ||||| || ||||| || |||||||||||| | Sbjct 21234750 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21234691 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| ||||| || || || | |||||||| || ||||| Sbjct 21234690 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21234631 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || | || ||||| | | |||||| ||||| Sbjct 21234630 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 21234571 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 21234570 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 >seq2 Length=31686972 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||| || Sbjct 3056790 CCACCACGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 3056849 Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| || | || || ||||| ||||| || || || | ||||||||| || || || Sbjct 3056850 AGGGTCCTGCCA-TCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 3056908 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || || || || ||||| ||| | ||||| || || ||||| Sbjct 3056909 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCAC 3056968 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| | ||| || || || || ||||| Sbjct 3056969 CTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 3057016 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || ||||| ||||| || |||||||||||| | Sbjct 3056007 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3056066 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| ||||||||| || || || Sbjct 3056067 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3056126 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || || | ||||| || || || Sbjct 3056127 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACC 3056186 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| || || || || || || ||||| || ||||| Sbjct 3056187 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || || ||||| || ||||||||||| | Sbjct 3056235 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3056294 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || || | ||||||||| || || || Sbjct 3056295 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3056354 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || Sbjct 3056355 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACC 3056414 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || || || || ||||| Sbjct 3056415 TCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 >seq9 Length=19219615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| ||||| || ||||| ||||||||||||||| | Sbjct 13562113 CCACCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCC 13562054 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || || || || | ||||||||| || |||| Sbjct 13562053 AGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCAGCGGG 13561994 Query 134607 ATGCCT 134612 || ||| Sbjct 13561993 ATACCT 13561988 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| |||||||| ||||| || |||||||||||| | Sbjct 18897036 CCACCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 18896977 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || || | |||||||| || || || Sbjct 18896976 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 18896917 Query 134607 ATGCCT 134612 |||||| Sbjct 18896916 ATGCCT 18896911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398324190240