Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4 168 2e-36 seq1 158 3e-33 seq5 154 4e-32 seq2 152 1e-31 seq6 136 9e-27 seq8 132 1e-25 seq7 100 7e-16 seq3 98.7 2e-15 seq9 91.5 4e-13 seq11 87.8 4e-12 >seq4 Length=27574323 Score = 168 bits (186), Expect = 2e-36 Identities = 156/198 (79%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||| || ||||| || || |||| |||||||| || | || Sbjct 24792869 ACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGT 24792810 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || || ||||| || |||||||| Sbjct 24792809 GCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACC 24792750 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| |||| || || || || Sbjct 24792749 CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAA 24792690 Query 225672 CGTGATCGTCTTGCCCGT 225689 |||||||||||||| || Sbjct 24792689 GGTGATCGTCTTGCCAGT 24792672 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||||||||| || |||||||| ||||||| ||||| || || | || Sbjct 24792640 CGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTG 24792581 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||||||||| ||||| || || || ||||| || || || || Sbjct 24792580 CGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCC 24792521 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||||||| ||||| ||||| |||| || || || | Sbjct 24792520 TCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGG 24792461 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | |||||| Sbjct 24792460 GTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 24792420 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| | ||||| || || |||| || ||||| || | ||| Sbjct 24792413 ACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGT 24792354 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || |||||||| |||||||||||||| ||||| ||||| || || || || Sbjct 24792353 ACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCC 24792294 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||||||| || || || || |||| || || || || Sbjct 24792293 CTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAA 24792234 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 24792233 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 24792192 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||||||||| || ||||| || || |||| || || ||||| | || Sbjct 24793097 ACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGT 24793038 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 24793037 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCC 24792978 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || |||||||| |||||| ||||||||||| |||| || || || | Sbjct 24792977 CTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAG 24792918 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 24792917 AGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24792876 >seq1 Length=36915442 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||||| | || | ||| || Sbjct 10946939 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 10946998 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct 10946999 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 10947058 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||||||| Sbjct 10947059 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 10947118 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 10947119 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 10947153 >seq5 Length=24206129 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 3088027 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 3087968 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || || ||||||||||| Sbjct 3087967 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 3087908 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 3087907 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 3087848 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 3087847 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3087813 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| |||||||| || |||| ||||| || || | || | ||||||| Sbjct 19880592 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCT 19880533 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || || || |||||||| Sbjct 19880532 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 19880473 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || ||||| || |||| || || || | || || ||| Sbjct 19880472 TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTC 19880413 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 19880412 TTGCCAGTGAGAGTCTT 19880396 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || || | ||||| ||||| | || | |||||| Sbjct 19881504 AGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 19881445 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || ||||||||||||||||| Sbjct 19881444 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 19881385 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || ||| | || || || | || || ||| Sbjct 19881384 TGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTC 19881325 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 19881324 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 140 bits (154), Expect = 8e-28 Identities = 165/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || |||||||| |||||||| ||||| || | ||||| || ||||| || | Sbjct 7376905 AGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGA 7376964 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGAT-AAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| || |||||||| ||||||||||| ||| || || ||||| | || ||||| || Sbjct 7376965 CCATCCTCAAGCTGCTTGCCAGCGAAGATAAAGACGATGCTGGTCAAGGGGGATACCCTC 7377024 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| || ||||||||| |||||| || || |||||||||| || || || || || Sbjct 7377025 CTTATCCTGGATCTTTGCCTTCACGTTGTCAATCGTGTCTGAGGACTCAACCTCCAAAGT 7377084 Query 225675 GAT-CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| ||||| | ||||| || || | || | |||||| Sbjct 7377085 GATGGGTCTTTCTTGTCAAGGTCTTCACAAAGATCTGCATT 7377125 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || || | ||||| || || | || | ||||| Sbjct 19881276 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCC 19881217 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| |||| || ||||| || || || || ||||| || Sbjct 19881216 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 19881157 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||||||| | || || || | || || ||| Sbjct 19881156 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTC 19881097 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | ||| | |||||| Sbjct 19881096 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 19881064 Score = 104 bits (114), Expect = 6e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| ||||| || | |||||||| || | || | || || Sbjct 7377141 AGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCC 7377200 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || ||||| || || || |||| || |||||||| |||||||| Sbjct 7377201 TCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTTAGGTGGAATACCCTCCTTGTCC 7377260 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGG 225658 || ||||| ||| ||| || || ||||| |||| Sbjct 7377261 TGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGG 7377297 >seq2 Length=31686972 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 3056022 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCC 3056081 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||| || |||||||| Sbjct 3056082 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 3056141 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || |||||||| ||| | || || || || ||||| ||| Sbjct 3056142 TGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTC 3056201 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 3056202 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| || || |||| ||||| || || | || || ||||| Sbjct 3056805 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCC 3056864 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || || || |||||||| Sbjct 3056865 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 3056924 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 3056925 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 3056984 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 3056985 TTGCCGGTCAGAGTCTT 3057001 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| || || | || | ||||| Sbjct 3056250 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCC 3056309 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || || || |||||||| Sbjct 3056310 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 3056369 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| ||| | || || || | ||||| ||| Sbjct 3056370 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTC 3056429 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 3056430 TTGCCTGT 3056437 Score = 96.9 bits (106), Expect = 8e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || || ||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| Sbjct 22634267 AGGGGTTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 22634326 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 22634327 GAGTCTGACAC 22634337 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/103 (82%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 6770 AGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGCA 6827 |||| |||||||| |||| ||||||||| | |||||||| | || ||| || ||||||| Sbjct 5421340 AGAGGATGATCAGTCACACTGGGACTGAGACACGGCCCA-GACTCCTACGAGAGGCAGCA 5421282 Query 6828 GTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 |||| |||| || |||||||||||||| |||| ||| |||| Sbjct 5421281 GTGGGGAATTTTCCGCAATGGGCGAAAGCCTGATGGAGCAATG 5421239 >seq6 Length=25711811 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| || || |||| |||||||| || | || | ||||| Sbjct 22964017 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCC 22964076 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||| ||||| ||||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 22964077 TCTAGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCC 22964136 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| || || || || |||| || || || | ||||| ||| Sbjct 22964137 TGAATCTTGGCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 22964196 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 22964197 TTGCCAGT 22964204 Score = 123 bits (136), Expect = 6e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| || || |||| ||||| ||||||| || | ||||| || |||||||| ||| Sbjct 23416349 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23416290 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| || || || ||||| || || || || |||||||| |||||||| ||| Sbjct 23416289 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 23416230 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || |||||||| |||| || || || | ||||| |||||||| || Sbjct 23416229 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 23416177 >seq8 Length=22678724 Score = 132 bits (146), Expect = 1e-25 Identities = 154/206 (75%), Gaps = 10/206 (5%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT-CTCCCATC 225560 |||||||| ||||| ||||| ||||| || | ||||| || || || ||| | || || Sbjct 3985226 AGGACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGC-AAGGTTGCGTCCTTC 3985284 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| || |||||||| || || || ||||| || ||||| || |||||||| Sbjct 3985285 CTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 3985344 Query 225621 TTGGATCTTTTGCTTCACAGCTTC--------GATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||| |||||| ||||| ||||||||| || | ||||| || | Sbjct 3985345 CTGGATCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGG 3985404 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| | |||||| |||| ||| || Sbjct 3985405 GTGATGGACTTGCCGGTCAGAGTCTT 3985430 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| || || || || || | ||||| || || | || | || || Sbjct 3995708 AGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCC 3995767 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || ||||| || ||||| || Sbjct 3995768 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTATCC 3995827 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || | ||||| || | ||||| | | Sbjct 3995828 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGAC 3995887 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719 ||||| |||| ||||| | || | ||||| | ||| Sbjct 3995888 TTGCCGGTCAGGGTTTTCACAAAGATCTGCATCTGATG 3995925 >seq7 Length=24128185 Score = 100 bits (110), Expect = 7e-16 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 372640 GGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATAGGG 372699 |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||| | Sbjct 19981929 GGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAG 19981988 Query 372700 TCTGACAC 372707 |||||||| Sbjct 19981989 TCTGACAC 19981996 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || ||||||||||| |||| ||||||||||||| || ||||||| |||| |||||||||| Sbjct 3056635 AGGGGGTAGCGACTATTTATTAAAAACACAGGATTCTGCTAAGTGGTAACACGATGTATA 3056694 Query 372697 GGGTCTGACAC 372707 | |||| |||| Sbjct 3056695 GAGTCTAACAC 3056705 >seq3 Length=33311619 Score = 98.7 bits (108), Expect = 2e-15 Identities = 109/141 (77%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGC--GTTATATCAAATTAAACCACATACTCCACC 7781 ||| || |||| ||||||| || |||| ||| |||| ||||||||||||| ||||||| Sbjct 21812486 TATGTCAAGGGCTGGTAAGGTT--TTGCAAGTTGTATCGAATTAAACCACATGCTCCACC 21812429 Query 7782 GCTTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGT 7841 |||| | || | || ||| || ||||||||||| |||||| |||| | | |||| Sbjct 21812428 GCTTGTGCAGGC-CCCATCAATTCCTTTGAGTTTTGGTCTTGCGACCGTACTCCCCAGGC 21812370 Query 7842 GGAATATTT-ACGCGTTAGCT 7861 ||| | ||| ||||||||||| Sbjct 21812369 GGAGTGTTTCACGCGTTAGCT 21812349 Score = 93.3 bits (102), Expect = 1e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || ||||| |||||||| ||||| || || |||| ||||| || |||| || Sbjct 6652644 ACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 6652703 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || ||||||||||| |||||||| || || || ||||| ||||| || || Sbjct 6652704 GCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCC 6652763 Query 225612 TTCC 225615 | || Sbjct 6652764 TGCC 6652767 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| ||||||| || | ||||| Sbjct 7808367 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 7808308 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| ||||| |||||| Sbjct 7808307 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 7808257 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/106 (80%), Gaps = 3/106 (3%) Strand=Plus/Plus Query 6775 ATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAGGG-CAGCAGTGGA 6832 ||||||||||||| ||||||||| | |||||||| | || | | ||| ||||||||| Sbjct 21811704 ATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCCACGGGGGGCAGCAGTGGG 21811762 Query 6833 GAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 |||| || |||||||||||||||| |||| || ||| | ||||| Sbjct 21811763 GAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGA 21811808 >seq9 Length=19219615 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || ||||| | ||| ||||| || || || || | ||||| ||||||| || | | Sbjct 11939312 AGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGC 11939253 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| || ||||| || | || ||||| || || || || |||||| Sbjct 11939252 CCATCTTCCAGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCC 11939193 Query 225616 TTGTCTTG 225623 ||||| || Sbjct 11939192 TTGTCCTG 11939185 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||||||| || | ||||| Sbjct 15021265 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 15021206 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| || || |||||| Sbjct 15021205 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCT 15021155 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||||||| || | || || Sbjct 15027724 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCA 15027665 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| ||||| |||||| Sbjct 15027664 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 15027614 >seq11 Length=23014695 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826 ||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||| Sbjct 9335506 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 9335564 Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 ||||| |||| || |||||||||||||| ||| ||| |||| Sbjct 9335565 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 9335608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531016648328