Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 143 6e-29 seq2 134 3e-26 seq6 127 5e-24 seq4 122 2e-22 seq1 122 2e-22 seq8 105 2e-17 seq3 93.3 1e-13 >seq5 Length=24206129 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| || || || || |||||||| || || |||||||| ||||| | || Sbjct 19881514 CCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGT 19881455 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || ||||||||||| || | ||||||||| | | || || Sbjct 19881454 ACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACC 19881395 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| || || || || || ||| | || | | | || || ||||| || || || Sbjct 19881394 TTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAG 19881335 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || ||||| ||||||||||| ||||||| |||||| Sbjct 19881334 AGTAATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 138 bits (152), Expect = 3e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| || | || || |||||||| || || |||||||| || || | || Sbjct 19881286 CCTGAGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGT 19881227 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || || |||||||| || ||||||||||||| | ||| || Sbjct 19881226 GCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCC 19881167 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || || | || | | ||||||| ||||| || || || Sbjct 19881166 CTCCTTATCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAG 19881107 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 |||||||| ||||| ||||||||||| ||||| | ||||||| |||| Sbjct 19881106 GGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATTCCACCC 19881058 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 || ||| | ||||||||| || || || || || || ||||||||||| || || | || Sbjct 19880602 CCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGT 19880543 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||||||| || || || |||||||| || | ||||||||||| | |||||| Sbjct 19880542 GCGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCC 19880483 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || ||| | || | | | || || ||| || ||||| Sbjct 19880482 CTCCTTGTCCTGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAG 19880423 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| |||||||||||||| |||| |||||| Sbjct 19880422 GGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 19880381 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 3088034 GAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 3087975 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | ||||||||||| | ||| ||||| Sbjct 3087974 GCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTC 3087915 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | | |||| || ||| || || || || Sbjct 3087914 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGT 3087855 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||||| |||||| || Sbjct 3087854 GATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3087813 Score = 114 bits (126), Expect = 3e-20 Identities = 160/223 (72%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||||| || ||||||||||| || || | || || ||||| Sbjct 19881048 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCC 19880989 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| || ||||| | ||||||||| | | || || ||||| || Sbjct 19880988 TCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 19880929 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | ||||||| ||| || ||||| ||||| || Sbjct 19880928 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTC 19880869 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT-TTACCCTTA 152114 ||||| || || |||||||| |||| ||||||| | |||||| Sbjct 19880868 TTGCCAGTAAGGGTCTTCACAAAGATCTGCATTCCTCCCCTTA 19880826 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| |||| || || ||||| |||||||| || ||||| ||||| || || | || Sbjct 7376673 CCTGAGCTTGAGCACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGT 7376732 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || || | || || ||||||||||| || | |||||||||||| | ||| || Sbjct 7376733 GCGTCCGTCCTTGAGCTACTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGCGGGGATGCC 7376792 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || ||||| || || ||| | || | | || ||| ||| || ||||| Sbjct 7376793 CTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAG 7376852 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || ||||| || || | |||||| Sbjct 7376853 CGTAATGGTCTTTCCGGTTAGGGTCTTGACAAAAATCTGCAT 7376894 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| ||||| ||||| || ||||| || ||||||||||| || || | || Sbjct 19880830 CCTTAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 19880771 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 || ||||| || || || || || ||||| || | ||||||||||| | || || Sbjct 19880770 CCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCC 19880711 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || ||| || || | || | | || ||| ||| || ||||| Sbjct 19880710 CTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAG 19880651 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| || | ||||| || |||| ||||| Sbjct 19880650 GGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19880609 Score = 93.3 bits (102), Expect = 1e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| || |||||||||||| | ||||| || | ||||| || || || || Sbjct 7376470 GTGGACTCCTTCTGGATGTTGTAACCTGCTAAGGTGCGGCCATCCTCGAGCTGCTTGCCA 7376529 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| || | |||||| |||| | || || ||||| || ||||| ||| ||| Sbjct 7376530 GCAAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTC 7376589 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||| || ||| || || | ||||| |||||||| || | ||| Sbjct 7376590 ACGTTGTCAATTGTGTCCGACGACTCAACCTCCAAGGTAATGGTTTTGCCGGTCAATGTC 7376649 Query 152088 TTCACGAAGACCTGCATTTTACCC 152111 || || |||| |||||| |||| Sbjct 7376650 TTGACAAAGATTTGCATTCCACCC 7376673 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/222 (68%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | |||||||| || || || |||||||| || ||||||||||| || | || Sbjct 7377131 CCTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGT 7377190 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || || || || || || || ||||| || | |||||||| | | || || Sbjct 7377191 GCGTCCGTCCTCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTTAGGTGGAATACC 7377250 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || ||||| || |||||| | || | |||| || ||| || Sbjct 7377251 CTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAAC------ 7377304 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||| |||||||| |||| |||||| Sbjct 7377305 -CTTATGGTATTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 7377345 >seq2 Length=31686972 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||||| || ||||||||||| || || | || || Sbjct 3056798 GAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCT 3056857 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 3056858 GCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTC 3056917 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| ||| ||| || ||||| || Sbjct 3056918 CTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGT 3056977 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || |||||||| || |||| |||||| Sbjct 3056978 GATAGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 3057016 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || || | || | ||||| Sbjct 3056250 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCC 3056309 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 3056310 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 3056369 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | |||| || ||||| || || || || || || Sbjct 3056370 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTC 3056429 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| || |||| |||||| Sbjct 3056430 TTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 3056015 GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 3056074 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | ||||||||| | | || || || Sbjct 3056075 TCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTC 3056134 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | | |||| || ||||| || || | ||| Sbjct 3056135 CTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGT 3056194 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||||||||||||| |||||| Sbjct 3056195 GATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 >seq6 Length=25711811 Score = 127 bits (140), Expect = 5e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| ||||| || || ||||| || ||||| || ||||||||||| || || || || Sbjct 23416762 CCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGT 23416703 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || ||||||||||| || | ||||||||||| | ||| || Sbjct 23416702 GCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATNCC 23416643 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || || | || | |||| || ||| || ||||| Sbjct 23416642 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAG 23416583 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||| ||||||| |||||| Sbjct 23416582 CGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 23416541 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| || ||||||||||| ||||| | || | ||||| || || || || Sbjct 23416349 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 23416290 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| || | ||||||||||| | ||| || ||||| || || || || ||| Sbjct 23416289 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 23416230 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | |||| || ||| || || || || || || ||||| ||||| ||| Sbjct 23416229 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 23416170 Query 152088 TTCACGAAGACCTGCAT 152104 ||||| |||| |||||| Sbjct 23416169 TTCACAAAGATCTGCAT 23416153 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || |||||||||||||| || | || | Sbjct 23416987 GAGGCGGAGCACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCG 23416928 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | ||||||||||| | ||| || || Sbjct 23416927 GCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTC 23416868 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | |||| || ||| || ||||| || Sbjct 23416867 CTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGT 23416808 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || || ||||||||||||| |||||| Sbjct 23416807 AATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 23416769 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | |||||||| || || || ||||| || |||||||||||||| || | || Sbjct 22964007 CCTGAGGCGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGT 22964066 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| ||||| || || || ||||| || | |||||||| | | || || Sbjct 22964067 GCGGCCATCCTCTAGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCC 22964126 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || ||||| || || ||| | || | | || || ||| || || || Sbjct 22964127 CTCCTTGTCCTGAATCTTGGCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCGAG 22964186 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| |||||||| |||| |||||| Sbjct 22964187 GGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 22964228 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || | || ||||| || || ||||||||||| || | || | Sbjct 22963782 GAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACG 22963841 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | ||||||||||| | ||||| || Sbjct 22963842 TCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTC 22963901 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || ||| | || | |||| || ||| || |||||||| Sbjct 22963902 CTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGT 22963961 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | |||||||| |||| |||||| Sbjct 22963962 GATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 22964000 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| || ||||| | ||| || || |||||||| || ||||||||||| ||||| || Sbjct 21709534 CCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCTAATGT 21709475 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||||| ||||| || ||||| |||||||| | | || || Sbjct 21709474 ACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGGGAATACC 21709415 Query 152003 TTCCTTTTCTTGAATTT 152019 || || || |||| || Sbjct 21709414 CTCTTTGTCCTGAAGTT 21709398 >seq4 Length=27574323 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || |||||||| || ||||| | || | ||||| Sbjct 24793087 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCC 24793028 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 24793027 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 24792968 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | |||| || ||| || || ||||| || || Sbjct 24792967 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTC 24792908 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 24792907 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24792876 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || || || |||||||||||||| || || | || | ||||| Sbjct 24792631 AGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCC 24792572 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||| || ||||| || | ||||||||| | | |||||| ||||| || Sbjct 24792571 TCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 24792512 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| || ||| || || || ||||| || Sbjct 24792511 TGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTC 24792452 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||| | ||||| Sbjct 24792451 TTGCCGGTGAGGGTCTTCACGAATATTTGCAT 24792420 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || | || ||||| || |||||||| ||||| || | ||| | |||||| Sbjct 24792404 GAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATC 24792345 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||||||||| | |||||||| | | ||| || ||||| || Sbjct 24792344 CTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTC 24792285 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || || ||| | || | | || || ||| || || | || || || Sbjct 24792284 CTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGT 24792225 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||| | |||||| Sbjct 24792224 CTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 24792192 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || |||||||||||||| || | || | ||||| Sbjct 24792859 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCC 24792800 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||| | | || || ||||| || Sbjct 24792799 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 24792740 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| || ||| || || | || || || Sbjct 24792739 TGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTC 24792680 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| |||| |||||| Sbjct 24792679 TTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 24792648 >seq1 Length=36915442 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 10946932 GAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 10946991 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||| || || || || ||||||||||| |||| ||||||||| | || ||| || || Sbjct 10946992 CCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTC 10947051 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | | |||| || ||| || || || || Sbjct 10947052 CTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGT 10947111 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||||| |||||| || Sbjct 10947112 GATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 10947153 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 21234742 GAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCG 21234683 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||| || || || || ||||||||||| |||| ||||||||||| || ||| || || Sbjct 21234682 CCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTC 21234623 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || | || ||||| ||| | |||| ||||| || || || || Sbjct 21234622 CTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGT 21234563 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || ||||||||||||| |||||| Sbjct 21234562 GATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 Score = 89.7 bits (98), Expect = 1e-12 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 21238868 GAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCG 21238809 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||| || || || || ||||||||||| |||| |||||||| || || || || || Sbjct 21238808 CCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTC 21238749 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 | | || || || | ||||| |||| || ||| | || || || | || || Sbjct 21238748 CCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGT 21238689 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || | || | || ||||||||||| | |||||| || Sbjct 21238688 GATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 21238647 >seq8 Length=22678724 Score = 105 bits (116), Expect = 2e-17 Identities = 161/228 (71%), Gaps = 10/228 (4%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT-C 151944 ||| | |||||||||||| || || |||||||| || || ||||| || || || ||| | Sbjct 3985219 GAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGC-AAGGTTGC 3985277 Query 151945 TCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 || || || || || ||||||||||| || | ||||||||||| | || || | Sbjct 3985278 GTCCTTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCT 3985337 Query 152005 CCTTTTCTTGAATTTTT--------TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTAC 152056 |||| || || || ||| || || ||| | || | | |||| || ||| || Sbjct 3985338 CCTTGTCCTGGATCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCAC 3985397 Query 152057 TTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||||| || ||||||||||| |||| |||||| Sbjct 3985398 CTCGAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 3985445 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || || ||||| || || |||||||| || || | || | Sbjct 3995701 GAGACGGAGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCG 3995760 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| ||||| || | ||||||||||| | || || || Sbjct 3995761 TCCTTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTC 3995820 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | | |||| || ||| || ||||| || Sbjct 3995821 CTTATCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCAAGGGT 3995880 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || | ||||| || || || ||||| |||| |||||| Sbjct 3995881 GATGGACTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 3995919 >seq3 Length=33311619 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| |||||||| || || || || ||||| || ||||||||||| || || | || | Sbjct 6652647 GAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCG 6652706 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || |||||||||||||| |||| ||||||||||| || ||||||| | Sbjct 6652707 TCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCTGC 6652766 Query 152006 C 152006 | Sbjct 6652767 C 6652767 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || ||||| || ||||||||||| ||||| | || | ||||| Sbjct 7808367 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 7808308 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||||||||| || | ||||||||||| || ||| ||| Sbjct 7808307 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 7808257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820622600052