Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 168 2e-36 seq5 159 8e-34 seq2 159 8e-34 seq1 147 5e-30 seq8 145 2e-29 seq6 143 6e-29 seq9 93.3 1e-13 seq7 87.8 4e-12 seq3 84.2 5e-11 >seq4 Length=27574323 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || ||||| || ||||| || ||| ||| Sbjct 24792879 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGAC 24792938 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| ||||| || || || |||||||| |||||||| Sbjct 24792939 ACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAG 24792998 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || |||||||| |||||| || Sbjct 24792999 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATC 24793058 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 24793059 CAGAAGGAGTCCACCCTGCACCTTGT 24793084 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||| | ||||| || ||| || Sbjct 24792195 CAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCCGAT 24792254 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || |||||||| ||||||||| Sbjct 24792255 ACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCAGCAA 24792314 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || ||||| | ||||| || ||||||||| || Sbjct 24792315 CGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATC 24792374 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||| ||||| Sbjct 24792375 CAGAAGGAGTCCACCTTGCACCTTGT 24792400 >seq5 Length=24206129 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || |||||||| ||| ||| Sbjct 3087819 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCGGAC 3087878 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 3087879 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAGCAG 3087938 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||||| || ||| || Sbjct 3087939 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTACAACATC 3087998 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 3087999 CAGAAGGAGTCCACCCTCCACCTCGT 3088024 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| |||||||| || || || || ||||| ||||| || ||| || Sbjct 19880384 CAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCGGAT 19880443 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| || |||||||| ||||||||||| Sbjct 19880444 ACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAG 19880503 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||||||||| | || ||||| || || ||| || Sbjct 19880504 CGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGGCGCACGCTTGCTGACTACAACATC 19880563 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 19880564 CAGAAGGAATCCACCCTCCACCTTGT 19880589 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || || ||||| ||||| || ||||||||| Sbjct 19881068 CAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTGGAGGTTGAGAGCTCAGAC 19881127 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| ||||| || || || ||||| ||||||||||| Sbjct 19881128 ACCATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAG 19881187 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || || ||||| || ||||| | || ||||| || || ||| | Sbjct 19881188 AGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAACATT 19881247 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 19881248 CAGAAGGAGTCTACCCTACA-CTTG 19881271 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || || || || ||||| || ||||| || Sbjct 19881296 CAGATCTTCGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCCGAT 19881355 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| || || || |||||||| Sbjct 19881356 ACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAGCAG 19881415 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| |||||||| | || || ||||| || ||| | Sbjct 19881416 CGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAACATT 19881475 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 19881476 CAGAAGGAGTCTACCCTCCACCTGGT 19881501 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || |||||||| ||||| || || || Sbjct 19880612 CAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCTGAT 19880671 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||| |||||||| || || || || ||||||||||| Sbjct 19880672 ACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAGCAG 19880731 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| ||||| ||||| || || ||| || Sbjct 19880732 CGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAACATC 19880791 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 19880792 CAGAAGGAGTCCACCCTTCACCTTGTT 19880818 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || ||||| || ||| | ||||| || || ||| Sbjct 7376663 CAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCTTGGAGGTTGAGTCGTCGGAC 7376604 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| ||||||||||||||| || || || || ||||| ||||| Sbjct 7376603 ACAATTGACAACGTGAAAGCAAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAG 7376544 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| || || || |||||||| ||||| | || | || | ||| ||| || Sbjct 7376543 CGACTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGGTTACAACATC 7376484 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || |||| || Sbjct 7376483 CAGAAGGAGTCCACCTTGCACCT 7376461 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || ||||| || || || || ||||| || || || Sbjct 7376891 CAGATTTTTGTCAAGACCCTAACCGGAAAGACCATTACGCTTGAGGTCGAGTCTTCTGAT 7376832 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| || || ||||| |||||||||| Sbjct 7376831 ACAATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCGCGGACCAGCAG 7376772 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| | || ||| | || || || || || || || Sbjct 7376771 CGCCTCATCTTCGCCGGCAAGTAGCTCAAGGACGGACGCACCCTGGCTGACTACAATATC 7376712 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 7376711 CAGAAGGAGTCTACCCTTCACCTAGT 7376686 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 7/206 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || || | ||| || ||| ||| Sbjct 7377342 CAGATCTTTGTGAAGACACTCACTGGCAATACCATAA-------GGTTGAGTCCTCTGAC 7377290 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||||| Sbjct 7377289 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACCTAACCAGCAG 7377230 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || || || || ||| | || || || ||||| ||| | Sbjct 7377229 CGCCTCATCTTTGCGGGCAAGCAACTTGAGGACGGACGCACCCTCGCAGATTACAACATT 7377170 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 7377169 CAGAAAGAGTCCACCCTCCACCTTGT 7377144 >seq2 Length=31686972 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || |||||||| || || |||||||| ||||| || ||||| ||| Sbjct 3056458 CAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAGAGCTCGGAC 3056399 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 3056398 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 3056339 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || || || || ||| || Sbjct 3056338 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCTGACTACAACATC 3056279 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 3056278 CAGAAGGAGTCTACCCTCCACCTGGT 3056253 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || || || || |||||||| |||||||| || ||| Sbjct 3057013 CAGATCTTTGTCAAGACTCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGAC 3056954 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 3056953 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 3056894 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| ||||| ||||| || || ||| || Sbjct 3056893 CGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAACATC 3056834 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 3056833 CAGAAGGAGTCCACCCTCCACCTTGT 3056808 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || |||||||||||||||||| || ||| Sbjct 3056785 CAGATCTTTGTCAAGACACTGACCGGCAAGACCATCACCCTCGAGGTGGAATCTTCTGAC 3056726 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 3056725 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 3056666 Query 178044 CG 178045 || Sbjct 3056665 CG 3056664 >seq1 Length=36915442 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || |||||||| || |||||||| ||| ||| Sbjct 10947147 CAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTCGGAC 10947088 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| || |||||||| Sbjct 10947087 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAGCAG 10947028 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||||| || ||| || Sbjct 10947027 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTACAACATC 10946968 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 10946967 CAGAAGGAGTCGACCCTCCACCTGGT 10946942 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || |||||||| ||| ||| Sbjct 21234527 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGAGCAGCGAC 21234586 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||| |||||||||| ||| | |||||||| || || ||||| ||||||||||| Sbjct 21234587 ACGATCCAGAACGTCAAGGCGAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCAGCAG 21234646 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||||| || ||| || Sbjct 21234647 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATC 21234706 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 21234707 CAGAAGGAGTCGACGCTGCACCTGGT 21234732 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || | || | || ||||| |||| ||| || |||| ||| Sbjct 21238653 CAGATATTCGTGAAGACCCTGAACGGGAGGACCATCACGCTCGTGGTCGACAGCTGCGAC 21238712 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||||||||||| | ||| || |||| || || |||| ||| ||||||| Sbjct 21238713 TCGGTCGAGAACGTCAAGGCGAGGATCCACGACAGGGAGGGCGTCCCGCCGCACCAGCAG 21238772 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||||| || ||| || Sbjct 21238773 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATC 21238832 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 21238833 CAGAAGGAGTCGACGCTGCACCTCGT 21238858 >seq8 Length=22678724 Score = 145 bits (160), Expect = 2e-29 Identities = 160/214 (75%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| || || || | ||||||||||||||||| || ||| Sbjct 3985442 CAGATCTTTGTGAAGACTCTGACCGGCAAGTCCATCACCCTCGAGGTGGAGTCATCCGAC 3985383 Query 177984 ACCATCGAGAACGTCAAACA--------AAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 |||||||| || || || || |||||| |||||||| || || || ||||||| Sbjct 3985382 ACCATCGACAATGTGAAGCAGTGAAGGTAAAGATCCAGGACAAGGAGGGCATTCCTCCGG 3985323 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 ||||||| || || ||||||||||| || |||||||| || ||| | | ||||| || | Sbjct 3985322 ACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGAAGGACGCAACCTTGCTGACT 3985263 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || | || ||||| || || || |||||||| Sbjct 3985262 ACAAAATTCAGAAAGAGTCCACCCTCCATCTTGT 3985229 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || || | |||||||| |||||||| || ||| Sbjct 3995916 CAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCATCCGAC 3995857 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| ||||| || || || || || ||||||||||| Sbjct 3995856 ACCATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAGCAG 3995797 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| || ||| | || ||||| || || ||| | Sbjct 3995796 CGCCTCATCTTTGCCGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAACATT 3995737 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 3995736 CAGAAGGAGTCGACCCTCCATCTTGT 3995711 >seq6 Length=25711811 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || |||||||||||||| || ||| ||| Sbjct 23416156 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGAC 23416215 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 23416216 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 23416275 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || ||||| || ||| || Sbjct 23416276 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACAACATC 23416335 Query 178104 CAAAAAGAATCAAC 178117 || || || || || Sbjct 23416336 CAGAAGGAGTCCAC 23416349 Score = 138 bits (152), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| || ||||| || ||| ||| Sbjct 23416544 CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCGGAC 23416603 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 23416604 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGNATCCCCCCGGACCAGCAG 23416663 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || | || || || ||| || Sbjct 23416664 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCTGACTACAACATC 23416723 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || || || || || || || ||| | || ||||| Sbjct 23416724 CAGAAGGAGTCCACCCTTCACCTGGTTCTCAGGCTCAG 23416761 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || || ||||| ||||| || || ||| Sbjct 23416772 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCGTCCGAC 23416831 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 23416832 ACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 23416891 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | || ||||| ||||| ||| || Sbjct 23416892 CGTCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAACATC 23416951 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || |||||||| || || || Sbjct 23416952 CAGAAGGAGTCAACACTCCACCTGGT 23416977 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | |||||||| || ||||| || ||||| || ||| ||| Sbjct 22963997 CAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTTGAGGTCGAGTCCTCGGAC 22963938 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||| || || || |||||||||||||| || ||||| || ||||||||||| Sbjct 22963937 AAGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 22963878 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| |||||| | || || || ||||| ||| | Sbjct 22963877 CGCCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGACGTACACTGGCTGATTACAACATT 22963818 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||| || || Sbjct 22963817 CAGAAGGAGTCCACCTTGCACCTGGT 22963792 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || |||||||||||||| || ||| || Sbjct 22964225 CAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGAT 22964166 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || || || ||||||||| Sbjct 22964165 ACAATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCACCTGACCAGCAA 22964106 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || || || ||||| | || || || ||||| ||| || Sbjct 22964105 CGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGCACCCTCGCGGATTACAACATC 22964046 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 22964045 CAGAAGGAGTCCACCCTCCACCTTGT 22964020 Score = 96.9 bits (106), Expect = 8e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068 ||||||||||||| || || || || ||||||||| | || || ||||| || || || | Sbjct 21709401 TTCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC 21709460 Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | ||||||||| | || | || ||||| ||| | || ||||| ||||| || ||| | | Sbjct 21709461 TGGAAGATGGACGTACATTAGCTGATTACAACATTCAGAAAGAGTCAACGCTCCATTTGG 21709520 Query 178129 TTTTGAGACTCAG 178141 | |||| ||||| Sbjct 21709521 TCCTGAGGCTCAG 21709533 >seq9 Length=19219615 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || |||||||| || |||||||| ||| ||| Sbjct 13560996 CAGATCTTCGTGAAGACGCTCACCGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGAC 13561055 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||||||| |||||||| ||||| |||||||| ||||| || Sbjct 13561056 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTAT 13561099 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || |||||||| || |||||||| ||| ||| Sbjct 15026687 CAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGAC 15026746 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||||||| |||||||| ||||| |||||||| ||||| || Sbjct 15026747 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTAT 15026790 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||||||||||||||| || || |||||||| || || ||||| || ||||| | Sbjct 15021155 AGGTATCCCTCCGGACCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTGGAGGATGGCCG 15021214 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || ||| |||| || || || || ||||| || || Sbjct 15021215 CACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGT 15021262 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||||||||||||||| || || ||||||||||| || ||||| || ||||| | Sbjct 18896911 AGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCG 18896970 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || ||| |||| || || || || || || || || Sbjct 18896971 CACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTCCACCTCGT 18897018 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || ||||||| || |||||||| ||| ||| Sbjct 15020439 CAGATCTTCGTGAAGACGCTGACGGGGAAGTCGATCACGCTGGAGGTGGAGAGCATCGAC 15020498 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| |||||||| ||||| Sbjct 15020499 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGG 15020539 >seq7 Length=24128185 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||| ||||||||||| || || ||||||||||| || ||||| || || || | Sbjct 14307996 AGGGATCCCGCCGGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGCCG 14307937 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || ||||| || ||| |||| || || || || ||||| || || Sbjct 14307936 GACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 14307889 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||||||||| || ||| ||| Sbjct 14308291 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 14308232 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||||||| || ||||| ||||| |||||||| ||||| || Sbjct 14308231 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTAT 14308188 >seq3 Length=33311619 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||||||||||||||| ||| ||| Sbjct 6652953 CAGATCTTCGTGAAGACCCTGACTGGGAAGACCATCACCCTCGAGGTGGAGAGCAGCGAC 6652894 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| ||||| |||||||| || || Sbjct 6652893 ACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGG 6652853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731014926328