Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 183 3e-41 seq5 179 3e-40 seq4 143 2e-29 seq8 140 3e-28 seq2 136 4e-27 seq6 134 1e-26 seq3 118 1e-21 seq7 113 4e-20 seq9 109 5e-19 >seq1 Length=36915442 Score = 183 bits (202), Expect = 3e-41 Identities = 184/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 10946922 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 10946981 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCG 41752 |||||||||| |||| || ||||||||||||||||| || || ||||| ||||| ||| Sbjct 10946982 CGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCG 10947041 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| | | |||||||||| ||| || |||| ||| | | | ||||| ||||| Sbjct 10947042 GGATC-CCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTC 10947099 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| ||||| || |||||||| ||||| ||||| |||||||| || Sbjct 10947100 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 10947153 Score = 170 bits (188), Expect = 2e-37 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| |||||||| ||||||||| ||||| ||||||| Sbjct 21234751 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 21234692 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || |||||| |||| || ||||||||||||||||| || || ||||| |||||| |||| Sbjct 21234691 CAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 21234632 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCC 41812 || | | |||||||||| || || || | ||| | | |||||||| |||| Sbjct 21234631 GATC-CCCTCCTTGTCC-TGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCC 21234574 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| Sbjct 21234573 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21234524 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||| ||| || || | ||| || |||||||| ||||||||| ||||| ||||||| Sbjct 21238877 GCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 21238818 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || |||||| |||| || ||||||||||||||||| || || ||||| |||| || || Sbjct 21238817 CAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGG 21238758 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 |||| |||| |||| ||| | ||| | | || | ||||| || || Sbjct 21238757 GACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGAC 21238698 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | | | ||| || || | || |||| ||||| ||||| |||||||| || Sbjct 21238697 CACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 21238647 >seq5 Length=24206129 Score = 179 bits (198), Expect = 3e-40 Identities = 181/233 (78%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | ||| || || || ||| ||||||||| ||||| ||||||| Sbjct 3088044 CGCCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3087985 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| | || |||||||||||||||||||| || |||||||| ||||||| || Sbjct 3087984 CGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 3087925 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | ||||||||| ||| || |||| ||| | | | ||||| |||||| Sbjct 3087924 GGATCCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTCC 3087866 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 3087865 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3087813 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | | |||| |||| ||| ||||||||| ||||| || | | Sbjct 7376439 GCCACCACGGAGACGGAGCGCCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAACCTGC 7376498 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || |||||||||||||| || || ||||| ||||| || |||| ||| Sbjct 7376499 TAAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGTCGCTGCTGATCCGGGGG 7376558 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| | ||||||| ||| | | | ||||| |||||| | Sbjct 7376559 AATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACGTTGTCAATTGTGTCCGACGACTCAA 7376617 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || ||||| || |||| ||||| || || || ||||| Sbjct 7376618 CCTCCAAGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 7376666 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || || ||||||||||||||| ||||||| |||||| || Sbjct 19881510 AGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGG 19881451 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||||||||| ||||||||||| ||||| | ||||| | ||| Sbjct 19881450 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCC 19881391 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || |||| || | | | || ||| ||| ||||||| || Sbjct 19881390 TTGTCCTGGATCTTAGCCTTC-ACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGT 19881332 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| ||||| |||||||| Sbjct 19881331 AATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 19881293 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || ||||||||| || || ||||| | |||||||| |||| | Sbjct 7376685 CACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTT 7376744 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| |||||||||||| || |||||||| ||||||||||| | || |||||||||| | Sbjct 7376745 GAGCTACTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGCGGGGATGCCCTCCTTGTCC-T 7376803 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | || | | | || || ||||| ||||| | ||| || || | Sbjct 7376804 GAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCT 7376863 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || || || ||||| || |||||||||||| Sbjct 7376864 TTCCGGTTAGGGTCTTGACAAAAATCTGCATG 7376895 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| || | || || || || ||| ||||||||| ||||| ||||| | | Sbjct 19881063 CCACCCCTTAGGCGCAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 19881004 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || |||||||||||||| || || || ||||| ||||| | |||| Sbjct 19881003 AGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGGGGA 19880944 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 19880943 ATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTGTCTGATGACTCAAC 19880885 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| || || || || || || ||||| || || |||||||| Sbjct 19880884 CTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 19880837 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 19880835 CCTCCCCTTAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 19880776 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || |||||||||||||| || || ||||| ||||| ||||||| |||| Sbjct 19880775 AGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 19880716 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | ||||| | |||| | | | ||| || ||||| || Sbjct 19880715 ATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAAC 19880657 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || |||| ||||| || || || |||||| Sbjct 19880656 CTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATG 19880608 Score = 114 bits (126), Expect = 1e-20 Identities = 161/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||| || || || ||||||||||||||| ||||| | |||||||| Sbjct 19881282 AGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGG 19881223 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || ||||| || || | ||| ||||||| ||| | || |||| Sbjct 19881222 CCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCC 19881163 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 || ||| ||| || |||| ||| | | | ||||| ||| ||| ||||||| Sbjct 19881162 TTATCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCTGAGCT---CTCAACCTCCAG 19881107 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || ||||| |||||||||||||| Sbjct 19881106 GGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 19881065 Score = 104 bits (114), Expect = 2e-17 Identities = 98/124 (79%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | |||||| || ||||| ||||||||| ||||| |||||| Sbjct 17778515 CCGCCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 17778574 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || ||||| |||| || |||||||| || ||||| || || ||||| || ||| || Sbjct 17778575 GCCAGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATCCGGC 17778634 Query 41752 GGGA 41755 |||| Sbjct 17778635 GGGA 17778638 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| |||||||| ||||| ||||| | Sbjct 19880608 GCCTCCCCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 19880549 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || |||||| | || |||||||||||||| ||||| || || ||||| ||||||| || Sbjct 19880548 AAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 19880489 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| || | || || | || | | | || || ||||| | Sbjct 19880488 GATTCCCTCCTTGTCC-TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAA 19880430 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||||| || || || || || ||||| || || |||||||| Sbjct 19880429 CCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 19880381 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/210 (70%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || || ||| ||| ||||||||||| || || | ||||||||| |||| || Sbjct 7377144 ACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCA 7377203 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || |||||||| || || || |||||||| |||| | |||| | |||||||||| || Sbjct 7377204 AGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTTAGGTGGAATACCCTCCTTGTCC-TG 7377262 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || || | || | | | ||||| ||||| ||| |||| || || Sbjct 7377263 AATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACC-------TTATGGTATT 7377315 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| || || |||||||| Sbjct 7377316 GCCAGTGAGTGTCTTCACAAAGATCTGCAT 7377345 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||| ||||||||||| ||||| | | ||| || | || || Sbjct 7376913 CACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGACCATCCTC 7376972 Query 41713 GAGCTGCTTGCCGGCGAATAT-CAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 ||||||||||| ||||| || || || || ||||| ||| | | |||||| ||| Sbjct 7376973 AAGCTGCTTGCCAGCGAAGATAAAGACGATGCTGGTCAAGGGGGATACCCTCCTTATCCT 7377032 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTAT-CGT 41829 ||| ||| |||| ||| | | | ||||| ||||| ||||||| || || || Sbjct 7377033 GGATCTTTGCCTTC-ACGTTGTCAATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGGT 7377091 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | |||| ||||| || || |||||||| Sbjct 7377092 CTTTCTTGTCAAGGTCTTCACAAAGATCTGCAT 7377124 >seq4 Length=27574323 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||||||||||| Sbjct 24793102 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 24793043 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || |||||||| ||||| | || Sbjct 24793042 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 24792983 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 24792982 ATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCAGAGGACTCAAC 24792924 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 24792923 CTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24792876 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||| || || | Sbjct 24792874 CCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 24792815 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 24792814 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 24792755 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| || | | | ||||| ||||| || Sbjct 24792754 ATACCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATCGTGTCAGAGGACTCAAC 24792696 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || || || || ||||| || || |||||||| Sbjct 24792695 CTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 24792648 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| ||||||||| |||||||| || | Sbjct 24792419 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGC 24792360 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || ||| | || || ||||||||||| ||||| || ||||| || ||||| | || Sbjct 24792359 GAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGG 24792300 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || || | || | | | || ||| ||||| | Sbjct 24792299 GATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAA 24792241 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 24792240 CCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 24792192 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | || || ||||| ||| ||||| || ||||| ||||| | Sbjct 24792646 CCGCCCCGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCA 24792587 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || || || || || ||||| ||||| | || Sbjct 24792586 AGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 24792527 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||||| | | || | |||||| ||||| | Sbjct 24792526 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCG--ATCGTGTCGGAGGACTCGA 24792469 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || || || || || || || ||||| ||||| || |||||| Sbjct 24792468 CCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCATG 24792419 >seq8 Length=22678724 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||||||||| ||||| | Sbjct 3995692 GCCACCACGGAGACGGAGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGC 3995751 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || ||||||||||||||||| || || |||||||| ||||||| ||| Sbjct 3995752 AAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGG 3995811 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||| ||| ||| || |||| || | | | |||||| ||||||| Sbjct 3995812 AATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCGGATGACTCCA 3995870 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || | || || ||||| || || || || |||||||| Sbjct 3995871 CCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 3995919 Score = 132 bits (146), Expect = 4e-26 Identities = 171/236 (72%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| ||| |||||||| || ||||| | Sbjct 3985211 CCCCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGCA 3985270 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||| |||| | || ||||||||||| |||||||| || |||||||| ||||||| ||| Sbjct 3985271 AGGTTGCGTCCTTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 3985330 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA---------GTGTCGCTC 41806 | || |||||||||| ||| ||| |||| || | |||| |||||| Sbjct 3985331 ATGCCCTCCTTGTCCTGGATCTTTACCTTC-ACTGCTTCACATTGTCGATGGTGTCGGAT 3985389 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||||| | || || | || || ||||| ||||| || || |||||||| Sbjct 3985390 GACTCCACCTCGAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 3985445 >seq2 Length=31686972 Score = 136 bits (150), Expect = 4e-27 Identities = 171/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || ||| ||||||||| ||||| ||||||| | Sbjct 3056007 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3056066 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| ||||| ||||| ||||| | |||| Sbjct 3056067 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3056126 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| || ||||| | | | | ||||| ||| ||| Sbjct 3056127 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCA-ATGGTGTCAGAGCT---CTC 3056182 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || |||| ||||| ||||| |||||||| Sbjct 3056183 AACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3056233 Score = 131 bits (144), Expect = 2e-25 Identities = 170/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||| ||||| ||||| | | Sbjct 3056235 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3056294 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || || ||||| ||||| | ||| Sbjct 3056295 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3056354 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || |||||||||| || | || || | ||| | | | ||||| ||| ||| Sbjct 3056355 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCT---CTC 3056410 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| || || |||||||| Sbjct 3056411 AACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3056461 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 3056789 GCCACCACGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 3056848 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || || ||||||||||| ||||| || || ||||| ||||||| ||| Sbjct 3056849 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 3056908 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || | || || | ||| | | | ||||| ||||||| Sbjct 3056909 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCA 3056967 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || ||||| ||||| || || |||||||| Sbjct 3056968 CCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 3057016 >seq6 Length=25711811 Score = 134 bits (148), Expect = 1e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| ||||| ||||| | | |||||| | || || Sbjct 23416749 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCC 23416690 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || ||||| ||||||| ||| | | |||||||||| | Sbjct 23416689 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATNCCCTCCTTGTCCTGG 23416630 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || |||| ||| | | | ||||| ||||| ||||| | ||| || || || Sbjct 23416629 ATCTTGGCCTTC-ACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTT 23416571 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| ||||| |||||||| Sbjct 23416570 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 23416541 Score = 120 bits (132), Expect = 3e-22 Identities = 179/250 (72%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 41616 CAAATCATC-GTACATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCC 41674 |||| |||| | || | | ||| || || || || | |||||| |||| ||| |||| Sbjct 22963753 CAAAACATCTGAACCTACCGGCCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCC 22963812 Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||||||||| || || | || || || | || |||||||||||||| || || || Sbjct 22963813 TTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATG 22963872 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 |||||||| ||||||| ||||| | |||||||||| ||| | || || | || | | Sbjct 22963873 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTGTC 22963931 Query 41795 -ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 | |||| ||||| ||||| | || || || || || |||| ||||| || || Sbjct 22963932 GATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAA 22963991 Query 41854 AATCTGCATG 41863 ||||||||| Sbjct 22963992 GATCTGCATG 22964001 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||||| |||||||| | || || ||||||||||| ||||| Sbjct 23416344 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 23416285 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| ||||||| ||| | || |||||||||| || | || || | || Sbjct 23416284 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACAT 23416226 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||||| ||||| | || || || || || || || ||||| | Sbjct 23416225 TGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCA 23416166 Query 41850 CGAAAATCTGCAT 41862 | || |||||||| Sbjct 23416165 CAAAGATCTGCAT 23416153 >seq3 Length=33311619 Score = 118 bits (130), Expect = 1e-21 Identities = 100/122 (82%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||||||||| || | |||||| || |||||| ||||||||| ||||| ||||||| Sbjct 7808383 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 7808324 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || ||||| | || || |||||||| |||||||| || |||||||| |||||| |||| Sbjct 7808323 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 7808264 Query 41754 GA 41755 || Sbjct 7808263 GA 7808262 >seq7 Length=24128185 Score = 113 bits (124), Expect = 4e-20 Identities = 100/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | ||| || |||||||| ||||||||| ||||| |||||| Sbjct 14307868 CCGCCGCCGCGGAGGCGAAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 14307927 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || || || |||| || |||||||| |||||||| ||||| ||||| |||||| || Sbjct 14307928 GCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGC 14307987 Query 41752 GGGA 41755 |||| Sbjct 14307988 GGGA 14307991 >seq9 Length=19219615 Score = 109 bits (120), Expect = 5e-19 Identities = 98/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| || ||||| ||||||||||||||| ||||||| Sbjct 13562114 GCCACCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGC 13562055 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 |||||||| | || ||||||||||| || ||||| || || ||||| |||||| |||| Sbjct 13562054 CAGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCAGCGG 13561995 Query 41754 GA 41755 || Sbjct 13561994 GA 13561993 Score = 105 bits (116), Expect = 6e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || |||||| ||||||||| ||||| ||||||| Sbjct 18897037 GCCACCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 18896978 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 |||||||| | || || ||||||||||||||||| || |||||||| ||||||| Sbjct 18896977 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCG 18896922 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||||| || |||||| | || || ||||||||||||||||| Sbjct 11939286 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 11939227 Query 41731 TATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCC 41770 ||||| |||||||| || | |||| | || ||||||||| Sbjct 11939226 TATCAAACGCTGTTGATCTGGAGGGATCCCT-TCCTTGTCC 11939187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303930654400