Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 102 1e-16 >seq6 Length=21794218 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||| || ||||| ||||| || || ||||| |||||||| ||||||||||| || ||| Sbjct 18102039 TTCAGGACAAAGAGGGTATTCCCCCAGATCAGCAAAGGCTGATTTTTGCAGGGAAGCAAC 18102098 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || ||| | || ||||||| ||||| || ||||| || || ||||| | ||||||| Sbjct 18102099 TGGAAGATGGACGCACATTAGCTGATTACAACATTCAGAAGGAGTCAACGCTCCATTTGG 18102158 Query 124747 T 124747 | Sbjct 18102159 T 18102159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755432476988800