Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq6 125 8e-24 seq2 118 1e-21 seq5 116 4e-21 seq1 113 5e-20 seq4 100 3e-16 >seq6 Length=21794218 Score = 125 bits (138), Expect = 8e-24 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | | || ||||| || | ||| |||||| || || ||||| |||||| Sbjct 19645941 CCTCCCCTGAGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 19645882 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 19645881 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 19645822 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| || ||||| ||| | | | || || || ||||| Sbjct 19645821 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCAATGGTATCCGAGGACTCCAC 19645763 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGC 43191 || | |||||||| ||||| || || ||||| ||||| || ||||| | |||| Sbjct 19645762 CTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCATCTGCACGC 19645707 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | ||| |||||| || || |||||||| || || |||||| | || || Sbjct 19646836 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCGCCCATCCTC 19646777 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || || || || || ||||||||||| | || | | |||||||||| Sbjct 19646776 AAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 19646717 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | |||||| || || || || | |||||||| | Sbjct 19646716 GATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGAGGACTCAACCTCCAAGGTGATGGTCT 19646658 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| |||||||| ||||| Sbjct 19646657 TGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||||||| || || | || || |||||||| |||||||| Sbjct 19646133 TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 19646074 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| ||| || || | ||| Sbjct 19646073 ATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646015 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || || | ||||||||| ||||| || || || || || Sbjct 19646014 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTTTTGAC 19645955 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 19645954 GAAGATCTGCAT 19645943 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||||||| || || | || || |||||||| |||||||| Sbjct 19646361 TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 19646302 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| ||| || || | ||| Sbjct 19646301 ATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646243 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || || | |||||||| || || || || ||||| || Sbjct 19646242 GTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 19646183 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 19646182 GAAGATCTGCAT 19646171 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||||||| || || | || || |||||||| || || || Sbjct 19646589 TCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 19646530 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 19646529 ATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646471 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 19646470 GTCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTAAGGGTCTTGAC 19646411 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 19646410 GAAGATCTGCAT 19646399 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 610417 AAAAAAATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 610476 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 610477 TCACCACTATACTAC 610491 >seq2 Length=27082872 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 2373558 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 2373617 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2373618 ATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 2373676 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| |||||||| |||| |||||||| |||||||| || ||||| || Sbjct 2373677 GTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGAC 2373736 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 2373737 GAAGATCTGCAT 2373748 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| |||||| || || || || ||||| || |||| | Sbjct 2373305 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCC 2373364 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || ||||| ||||||||||| | || | || ||||| Sbjct 2373365 ATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTT 2373424 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || ||||| || | ||||| Sbjct 2373425 GTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGAT 2373484 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || ||||| || ||||| ||||| Sbjct 2373485 AGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 >seq5 Length=20131956 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 2691969 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2691910 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||||| ||| || || | ||| Sbjct 2691909 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 2691851 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 2691850 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 2691791 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 2691790 CGAAGATCTGCATCTT 2691775 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| |||| || ||||| || || || || Sbjct 16284198 CTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCCTCGAGCTGTTTGCCGGCAAA 16284139 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| ||| || | | Sbjct 16284138 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATT 16284079 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||| || ||||| || | |||||||| || || || | ||||| || Sbjct 16284078 GTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTGAC 16284019 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 16284018 AAAGATTTGCAT 16284007 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || || | || | ||||| || | ||| |||||| ||||||||||| Sbjct 16284695 TACTGACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAG 16284636 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || || || || || | || || |||||||| || ||||| || || ||||||||||| Sbjct 16284635 TCGGCAAGGGTGCGGCCATCGTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCA 16284576 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCT 43126 | || | || ||||||||| ||| || || | ||| | | | ||||| ||| Sbjct 16284575 GGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCGGAGCT 16284517 Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || | || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 16284516 C---TCAACCTCCAGAGTAATGGTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 16284463 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||||||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 16547623 AAAAATTTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 16547682 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 16547683 TCACCACTATACTAC 16547697 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| | | || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 16236661 AAAAATATGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 16236602 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 16236601 TCACCACTATACTAC 16236587 >seq1 Length=33916305 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 9799285 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 9799344 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | | |||||||||| ||| || || | ||| Sbjct 9799345 GATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 9799403 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 9799404 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 9799463 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 9799464 CGAAGATCTGCATCTT 9799479 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| | | || ||| ||| ||||||||| |||| |||||||||||||||| | Sbjct 1716494 ATTAAAAAAATACGCCGTGGCTGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAA 1716435 Query 60114 TACTCACCACTATACTAC 60131 |||||||||||||||||| Sbjct 1716434 TACTCACCACTATACTAC 1716417 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/185 (70%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 43002 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 43061 || ||||| |||||||| || || |||| || ||||| || ||||| ||||| ||| Sbjct 19118972 ATGTTGTAGTCAGCCAGTGTGCGGCCGTCCTCCAGCTGGCCGCCGGCGAAGATGAGCCGC 19118913 Query 43062 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTG 43121 |||||||| | ||| |||| |||| |||| |||| | | ||| | || | | | | Sbjct 19118912 TGCTGGTCCGACGGGACGCCCTCCCTGTCGTGGATTCTCTCTTTTATATTCTCGATGGAG 19118853 Query 43122 TCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGC 43181 |||| || || || | || |||||| |||| || || ||||| || | || ||| Sbjct 19118852 TCGCAGTTCTCGACCTCAAGCGCGATGGTCCTGCCAGTCAGGGTCTTCAC-GATATCTGC 19118794 Query 43182 ATTTT 43186 ||||| Sbjct 19118793 ATTTT 19118789 >seq4 Length=21479432 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || || || ||||| || || || | || || |||||| Sbjct 18578841 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCCTCGAGCTGC 18578782 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| ||||| ||||||||||| | || | || ||||||||| ||| || Sbjct 18578781 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTG 18578722 Query 43101 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 || | ||| | | | ||||| || || || || | |||||||| ||||| || Sbjct 18578721 GCCTTCA-CGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCAGT 18578663 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||||||||| Sbjct 18578662 GAGGGTCTTCACGAAGATTTGCAT 18578639 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| ||| ||||| || || || || || || || || ||| | || || |||||| Sbjct 18578385 TGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCCTCAAGCTGC 18578326 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || |||||||| || ||||||||||| | || | | |||||||||| ||| || Sbjct 18578325 TTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTA 18578266 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 || | | | | ||| ||| || || || || | |||||||| ||||| || Sbjct 18578265 GCCTTCACATTGTCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTG 18578206 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || || ||||| Sbjct 18578205 AGGGTCTTAACGAATATCTGCAT 18578183 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || || || || || || || || | || || |||||||| || ||||| Sbjct 18579269 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 18579210 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || || | ||| Sbjct 18579209 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 18579151 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||||| ||||| || || ||||| | Sbjct 18579150 TGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTCA 18579091 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 18579090 CGAAGATCTGCAT 18579078 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| ||| |||||| || || || || || || || || || | || || |||||| Sbjct 18578613 TGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGC 18578554 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || ||||| || ||||| ||||||||||| | || | | |||||||||| ||| || Sbjct 18578553 TTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTG 18578494 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 || | | | | ||||| ||| || || || | || || || ||||| || Sbjct 18578493 GCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTCTTGCCAGTG 18578434 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 18578433 AGGGTCTTCACGAAGATCTGCAT 18578411 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 3620701 AAAAATACTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 3620760 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 3620761 TCACCACTATACTAC 3620775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571799795029480