Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6 138 7e-28 seq5 131 1e-25 seq1 127 1e-24 seq4 122 6e-23 seq2 107 1e-18 >seq6 Length=21794218 Score = 138 bits (152), Expect = 7e-28 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||||||||||||||| | || || ||||| ||||||||||| | ||| ||| Sbjct 19645932 AGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19645873 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||||||||| ||||| ||||| ||||||||||| ||| | || |||| Sbjct 19645872 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 19645813 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||||| ||||| ||||| | | | | || | ||| | || || || || | || Sbjct 19645812 TTGTCCTGGATCTTG-GCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGT 19645754 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||||| ||||||||||| || |||||||| ||||||||| Sbjct 19645753 GATGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCATC 19645714 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| ||||| ||||| | ||| ||| ||||| ||||||||||| | ||| ||| Sbjct 19646160 AGCCTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19646101 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||||||||| ||||| ||||| ||||||||||| || | || |||| Sbjct 19646100 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCC 19646041 Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351 ||||| ||||| ||| | | | | |||| || | || ||||| || | |||| Sbjct 19646040 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 19645981 Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| |||||||| || ||||| || ||||||||||| Sbjct 19645980 ATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| ||||||||||| | || ||| ||||||||||||||||| | ||| ||| Sbjct 19646616 AGCCTGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGG 19646557 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||||||||| || || ||||| ||||||||||| ||| | | |||| Sbjct 19646556 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 19646497 Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351 ||||| ||||| ||| | | | | |||| || | || ||||| || | ||| Sbjct 19646496 TTGTCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAGTGTG 19646437 Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || || || || || ||||||||||| Sbjct 19646436 ATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 19646399 Score = 114 bits (126), Expect = 8e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| ||||| || || | || ||| ||||| ||||||||||| | ||| ||| Sbjct 19646388 AGCCTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19646329 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||||||||| ||||| ||||| ||||||||||| || | || |||| Sbjct 19646328 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCC 19646269 Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351 ||||| ||||| ||| | | | | |||| || | || ||||| || | ||| Sbjct 19646268 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTG 19646209 Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || ||||| || || || || ||||||||||| Sbjct 19646208 ATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 19646171 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| || ||||| || || || || || || | ||| | || Sbjct 19269429 AGCACGAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCGGCCATCC 19269488 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || || || || | ||||||| || || | || ||||||||| Sbjct 19269489 TCAAGCTGTTTCCCGGCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTCCTTGTC- 19269547 Query 34298 GCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 || ||||| ||| | || | || | ||| | || || || || | ||||||| Sbjct 19269548 -CTGGATTTTGGCCTTGACATTATCAATAGTATCTGAGGACTCAACCTCAAGGGTGATGG 19269606 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| ||||||||||| |||||||||||||||||| Sbjct 19269607 TTTTCCCGGTGAGAGTCTTCACAAAGATCTGCATC 19269641 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || | || || | || || | ||||||||| || || Sbjct 19646817 TCCTTCTGGATGTTGTAATCCGCAAGGGTCCGCCCATCCTCAAGCTGCTTGCCGGCAAAG 19646758 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| ||| | | ||||||||| ||||| ||| | | | Sbjct 19646757 ATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG 19646698 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || || || |||| |||||||| ||||| || || || || ||| Sbjct 19646697 TCGATCGTGTCCGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTAAGGGTCTTGACA 19646638 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 19646637 AAGATCTGCAT 19646627 >seq5 Length=20131956 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | ||||||||||| | || || ||||| ||||||||||||| Sbjct 2692004 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2691945 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || ||| |||| || | ||||||||| ||||| ||||| ||||||||||| | |||| Sbjct 2691944 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 2691885 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | || | || || || Sbjct 2691884 -ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 2691826 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| ||||||||| || || || || || ||||| |||||||||||| Sbjct 2691825 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 2691777 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || || ||||| || |||||||||| || ||| | ||| Sbjct 16284674 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCG 16284615 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||| || |||||||||||||| || | || |||||||| Sbjct 16284614 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 16284555 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || |||| || ||||| Sbjct 16284554 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 16284495 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| |||||||| || |||||||||||||| Sbjct 16284494 TTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 16284463 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || || ||||| ||||||||||| | ||| | | | || Sbjct 16283990 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCCAGGGTCCTGCCATCC 16283931 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| || |||||||| ||| | | ||||||||| Sbjct 16283930 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 16283871 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || || | || ||||| Sbjct 16283870 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTTATGGTC 16283811 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| || |||||||||||||||||| Sbjct 16283810 TTGCCAGTGAGTGTCTTCACAAAGATCTGCATC 16283778 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || | | |||| || | ||| ||||| || || Sbjct 16284197 TCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCCTCGAGCTGTTTGCCGGCAAAG 16284138 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| ||| | || ||||||||| |||||| ||| | || | Sbjct 16284137 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATTG 16284078 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||||| || || || || | |||||||| || || || | || || ||| Sbjct 16284077 TCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACA 16284018 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 16284017 AAGATTTGCAT 16284007 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| || ||||| ||||||||||| | || ||| | || Sbjct 16284446 AGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 16284387 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||| ||||| | |||||| || ||| | || ||||||||| Sbjct 16284386 TCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 16284327 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | || | || | || || || | || || || Sbjct 16284326 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATAGTC 16284267 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||||||||| || || || || ||||| Sbjct 16284266 TTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 16284235 >seq1 Length=33916305 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | ||||||||||| | || || ||||| ||||||||||||| Sbjct 9799250 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9799309 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | ||||||||| ||||| ||||| |||||||||| || |||| Sbjct 9799310 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 9799369 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | | | | || | || | || || || Sbjct 9799370 -ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 9799428 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| ||||||||| || || || || || ||||| |||||||||||| Sbjct 9799429 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 9799477 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||| | ||||||||||| | ||| ||| |||| |||| ||| ||| ||||| Sbjct 19118981 TCGTTCCGGATGTTGTAGTCAGCCAGTGTGCGGCCGTCCTCCAGCTGGCCGCCGGCGAAG 19118922 Query 34259 ATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||||||||||||| ||||||| |||| |||| ||||| || | | |||| || Sbjct 19118921 ATGAGCCGCTGCTGGTCCGACGGG-ACGCCCTCCCTGTCGTGGATTCTCTCTTTTATATT 19118863 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || || ||| ||||| || | || |||||| |||| || || || ||||| Sbjct 19118862 CTCGATGGAGTCGCAGTTCTCGACCTCAAGCGCGATGGTCCTGCCAGTCAGGGTCTTCAC 19118803 Query 34378 AAAGATCTGCAT 34389 | |||||||| Sbjct 19118802 -GATATCTGCAT 19118792 >seq4 Length=21479432 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| || ||||| | || || ||||| ||||| ||||||| Sbjct 18579304 CCACCACGGAGGCGCAGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCA 18579245 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 18579244 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 18579185 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | || | || ||||| Sbjct 18579184 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACC 18579125 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct 18579124 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18579078 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| || || ||| ||||| ||||| ||||| | || ||| | || Sbjct 18578394 AGGACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCC 18578335 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||||||||| || | | ||||||||| Sbjct 18578334 TCAAGCTGCTTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCC 18578275 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | |||| ||||| || ||||| |||| |||||||| Sbjct 18578274 TGGATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTC 18578215 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| || || || || ||||||||| Sbjct 18578214 TTGCCAGTGAGGGTCTTAACGAATATCTGCATC 18578182 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| || || || ||||| ||||| ||||| | || ||| | || Sbjct 18578622 AGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCC 18578563 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || ||||| ||||||||||| || | | ||||||||| Sbjct 18578562 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 18578503 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | |||| | || | ||| ||||| || | || || || Sbjct 18578502 TGGATCTTGGCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTC 18578443 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || ||||| ||||||||||| Sbjct 18578442 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 18578411 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| ||||| | || || | || || | ||||||||| ||||| Sbjct 18578829 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAG 18578770 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || |||||||| ||||| ||| | | | Sbjct 18578769 ATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 18578710 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| |||| |||||||| ||||| ||||| || ||||| Sbjct 18578709 TCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACG 18578650 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 18578649 AAGATTTGCAT 18578639 >seq2 Length=27082872 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| || ||||| ||||||||||||| || |||| | || Sbjct 2372853 AGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCATCC 2372912 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||| || || ||||||||||| ||| | | ||||||||| Sbjct 2372913 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 2372972 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | || | || || |||| |||||||| Sbjct 2372973 TGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCAACTTCCAAAGTGATGGTC 2373032 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || ||||||||||||||||| Sbjct 2373033 TTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| || ||||| ||||| ||||| | || | | | || Sbjct 2373081 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373140 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || ||||| ||||||||||| ||| | || |||||||| Sbjct 2373141 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373200 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | || || |||| ||||| || Sbjct 2373201 TGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTCTCAACCTCCAGAGTGATCGTC 2373260 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || || |||||||||||||| Sbjct 2373261 TTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || ||||||||||| | || | | |||| |||| ||||||||| || || Sbjct 2374014 TCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAAG 2374073 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| || ||| | || ||||||||| ||||| ||| | | Sbjct 2374074 ATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTA 2374133 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||| || || || | ||||| || |||||||| || || |||||| Sbjct 2374134 TCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTCTTCACA 2374193 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 2374194 AAGATCTGCATC 2374205 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | ||| | | | || |||| ||||||||| ||||| Sbjct 2373786 TCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAG 2373845 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| || ||| | || ||||||||| ||||| ||| | | | Sbjct 2373846 ATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 2373905 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || || | ||||| || ||||| || ||||| || || Sbjct 2373906 TCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTTACG 2373965 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 2373966 AAGATCTGCAT 2373976 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || || ||||| ||||| ||||| | || | | | || Sbjct 2373309 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373368 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || ||||| ||||||||||| ||| | || |||||||| Sbjct 2373369 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373428 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || || || || | ||||| || Sbjct 2373429 TGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 2373488 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| ||||| || || ||||||||||| Sbjct 2373489 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | || | | | || || | ||||||||| || || Sbjct 2373557 TTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAA 2373616 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || ||||||||||| || | || ||||||||| ||||| ||| | | Sbjct 2373617 GATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 2373676 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | ||||| || || | |||||||| ||||| || ||||| || || Sbjct 2373677 GTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGAC 2373736 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 2373737 GAAGATCTGCAT 2373748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323062191836960