Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 138 1e-27 seq2 118 9e-22 seq5 98.7 9e-16 seq4 91.5 1e-13 seq9 86.0 6e-12 seq1 82.4 7e-11 >seq6 Length=21794218 Score = 138 bits (152), Expect = 1e-27 Identities = 358/537 (67%), Gaps = 9/537 (2%) Strand=Plus/Plus Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 || ||||| || | ||||| | ||| ||||| || || | ||||| || ||| | Sbjct 907023 GACGTGCAGGTCGCCGAGGCACGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 907082 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || ||||| ||||| || |||| || ||| | ||| ||| |||||| Sbjct 907083 CACTCGGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGACGTCGAGAAGGAC 907142 Query 57876 AGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGAGTGGTCAAT 57934 | || ||| ||| ||||| || | ||||| | |||| ||||| || ||| | || Sbjct 907143 CGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTGCGCCGC-AAGGCCGACTGGGCCAT 907201 Query 57935 CAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGT 57994 ||||| | ||| | | | ||||||||| | || |||| |||||| ||| Sbjct 907202 GCGCTGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGT 907258 Query 57995 CGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCC 58053 ||| || || ||||| |||||| ||| |||| || | || ||| | ||||| ||||||| Sbjct 907259 CGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAGAAGCGCGGCC 907317 Query 58054 TGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTG 58113 | ||||| ||||| || || ||||||| | || || ||||||||||| ||||| | Sbjct 907318 TCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCG 907377 Query 58114 ATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGATCGCATCTTG 58172 | || || ||||| | ||| | | | | || | ||||| | ||| || Sbjct 907378 ACTTCGCCTGCCTCCTATACGACCTCCTCCGCGGCAAGCTCGACG-AGTCCCGCGTCCGC 907436 Query 58173 GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTG 58232 || || || |||| || |||| ||||| | || || ||| ||| || || || || Sbjct 907437 GAGATCGTCGCCGACGCCGTCGACATCGAGAGGGAATTCGTCTGCGACGCGCTCCCCGTC 907496 Query 58233 GCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 || | |||| |||||| || | ||| ||||||| ||||| || |||||| Sbjct 907497 GCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGAC 907553 Score = 129 bits (142), Expect = 5e-25 Identities = 356/537 (66%), Gaps = 9/537 (2%) Strand=Plus/Minus Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 || ||||| || | ||||| | ||| ||||| || || | ||||| || ||| | Sbjct 6279172 GACGTGCAGGTCGCCGAGGCACGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATC 6279113 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || ||||| ||||| || |||| || ||| | ||| ||| |||||| Sbjct 6279112 CACTCGGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGACGTCGAGAAGGAC 6279053 Query 57876 AGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGAGTGGTCAAT 57934 | || ||| ||| || || || | ||||| | |||| ||||| || ||| | || Sbjct 6279052 CGCCTCTTCCGCGCCATAGACACCGTCCCCGCCGTGCGCCGC-AAGGCCGACTGGGCCAT 6278994 Query 57935 CAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGT 57994 ||||| | ||| | | | ||||||||| | || | || |||||| || Sbjct 6278993 GCGCTGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGCCTCGTTGCCTTCGCCTGTGT 6278937 Query 57995 CGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCC 58053 ||| || || ||||| |||||| ||| |||| || | || ||| | ||||| ||||||| Sbjct 6278936 CGAGGGCATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTAAAGAAGCGCGGCC 6278878 Query 58054 TGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTG 58113 | ||||| ||||| ||||| ||||||| | || || ||||||||||| || || | Sbjct 6278877 TAATGCCGGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCG 6278818 Query 58114 ATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGATCGCATCTTG 58172 | || || ||||| | ||| | | | | || | ||||| || ||| || Sbjct 6278817 ACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACG-AGGTCCGCGTCCGC 6278759 Query 58173 GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTG 58232 || || | |||| || |||| ||||| | ||||| ||| ||| || || || || Sbjct 6278758 GAGATCGTTGCCGACGCCGTCGACATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTC 6278699 Query 58233 GCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 || | |||| |||||| || | ||| ||||||| ||||| || |||||| Sbjct 6278698 GCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGAC 6278642 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || ||||| || |||||| | || || || | || Sbjct 19645715 ATGCAGATTTTTGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 19645774 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | |||||| | || ||||||||| ||| | || || |||||| Sbjct 19645775 GATACCATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 19645834 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || || || || || ||| Sbjct 19645835 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAAC 19645894 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || ||||| ||||| || || || ||||| |||| Sbjct 19645895 ATCCAGAAGGAGTCCACCCTTCACCTGGTGCTGAGGCTCAGGGGAGGTA 19645943 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || || ||||| | || || || | || Sbjct 19646170 CATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCCTC 19646229 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||| ||| | || || ||||| Sbjct 19646230 AGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 19646289 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| | || || || || || || || Sbjct 19646290 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAA 19646349 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || || ||||| || || || || ||||| || Sbjct 19646350 CATCCAGAAGGAATCCACCCTCCATCTTGTGCTCAGGCTCAGGGGAGG 19646397 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || ||||| ||||| || ||||| | || || || | || Sbjct 19645943 ATGCAGATCTTCGTCAAAACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 19646002 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 19646003 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAG 19646062 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || || || || || ||| Sbjct 19646063 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAAC 19646122 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || || || || || || || || ||||| || Sbjct 19646123 ATCCAGAAGGAATCTACCCTCCACCTTGTGCTCAGGCTCAGGGGAGG 19646169 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| | || || || | || Sbjct 19646398 CATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACACTTGAGGTCGAGTCCTC 19646457 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||| || | || || ||||| Sbjct 19646458 GGACACGATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 19646517 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| | || || || || || || || Sbjct 19646518 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACACTGGCTGACTACAA 19646577 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| || || || ||||| || || || ||||| |||| Sbjct 19646578 CATACAGAAGGAATCCACCCTCCACCTGGTGCTCAGGCTCAGGGGTGGTA 19646627 >seq2 Length=27082872 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||||||||| ||||| || |||||| |||| || || | || Sbjct 2373977 CATGCAGATCTTCGTAAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTC 2373918 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||| ||| | || || || || Sbjct 2373917 TGACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 2373858 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| |||| || | ||| || || || || Sbjct 2373857 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTGGCTGACTACAA 2373798 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| ||||| || || || Sbjct 2373797 CATCCAGAAGGAGTCGACCCTTCACCTTGTTCT 2373765 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| | || || || | || Sbjct 2373521 CATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 2373462 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| | || ||||||||||||| | || || ||||| Sbjct 2373461 TGACACTATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCA 2373402 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| ||| | || || | ||| | || ||||| Sbjct 2373401 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCTGACTATAA 2373342 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 2373341 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 2373309 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| |||| || ||| | || Sbjct 2373749 CATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTGGAATCTTC 2373690 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | || ||||||||| ||| | || || ||||| Sbjct 2373689 TGACACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 2373630 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| ||| | || || | ||| | || || || Sbjct 2373629 GCAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTTGCTGACTACAA 2373570 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || |||||||| || || || || || | || ||||| || Sbjct 2373569 CATCCAGAAGGAATCGACCCTCCACCTTGTCCTCCGTCTCAGGGGAGG 2373522 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| |||| || || |||| Sbjct 2374204 ATGCAGATCTTTGTGAAGACACTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCT 2374145 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || || ||| Sbjct 2374144 GACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAG 2374085 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| |||| ||| | ||| | || || ||| Sbjct 2374084 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTTGCGGACTACAAC 2374025 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || || || || || || Sbjct 2374024 ATCCAAAAGGAGTCAACCCTCCACCTTGTCCT 2373993 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || |||||||| |||||||| | || ||||| || Sbjct 2373292 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACGATCACTCTGGAGGTTGAGAGCTCA 2373233 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || ||||||||||||| | || || |||||| Sbjct 2373232 GATACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 2373173 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| ||| | || || | ||| | || |||||| Sbjct 2373172 CAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCTGACTATAAC 2373113 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || || || ||||| ||| | || | || |||| Sbjct 2373112 ATCCAGAAGGAGTCTACCCTCCACCTGGTGCTTCGTCTCCGTGGTGGTA 2373064 >seq5 Length=20131956 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||||| |||||||| || || || | || ||||| || Sbjct 16284462 CATGCAGATCTTTGTCAAGACTCTCACAGGCAAGACCATTACTCTGGAGGTTGAGAGCTC 16284521 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || ||||||||||||| | || || ||||| Sbjct 16284522 CGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 16284581 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| || || | ||| || || Sbjct 16284582 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGACGATGGCCGCACCCTTGCCGACTACAA 16284641 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| || || || || || || ||||| || | || ||||| ||| Sbjct 16284642 TATTCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGT 16284690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| |||| || || || |||||| | || || || | || Sbjct 16284006 CATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTTGAGGTGGAGTCCTC 16284065 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | | || | || || || ||| | ||||||||| ||| | || || |||| Sbjct 16284066 CGATACCATTGACAATGTTAAGGCAAAGA-TCCAGGACAAGGAGGGCATTCCCCCGGACC 16284124 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTAT 31369 |||||||||| || || || ||||||||| | || ||| | ||| | ||| || || Sbjct 16284125 AGCAGCGTCTGATCTTTGCCGGCAAACAGCTCGAGGACGGCAGGACCCT-AGCTGACTAC 16284183 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || || ||||| || || || | || ||||| || Sbjct 16284184 AACATCCAGAAGGAGTCCACCCTTCACCTTGTCCTCCGCCTCAGGGGAGG 16284233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||||| || ||||| || || ||| |||| ||||| || Sbjct 16284235 ATGCAAATTTTCGTCAAGACTCTCACCGGCAAGACTATTACCCTCGAGGTTGAGAGCTCA 16284294 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || || || ||||||||| ||| | || || || || Sbjct 16284295 GACACCATCGACAACGTGAAGGCAAAG-ATCCAGGACAAGGAGGGCATTCCCCCAGATCA 16284353 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||| | || || ||||||||||| ||| |||| || Sbjct 16284354 GCAGAGACTCATCTTCGCTGGCAAGCAGCTGGAGGA 16284389 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || ||| | || ||||| | ||| Sbjct 16283779 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCC 16283838 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| || | || || |||||| Sbjct 16283839 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 16283898 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||||||||| ||| | || || | ||| || || || ||| Sbjct 16283899 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTGGCTGACTACAAC 16283958 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || ||||| || Sbjct 16283959 ATTCAGAAGGAGTCCACCCTCCACCTGGTGCT 16283990 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| || || || ||||| | || || || | Sbjct 2691775 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 2691834 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||||||||| ||| | ||||| ||| Sbjct 2691835 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 2691894 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | || ||| || | ||| || Sbjct 2691895 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTAC 2691954 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || || ||||| || Sbjct 2691955 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 2691989 >seq4 Length=21479432 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 18578638 CATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCATC 18578697 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||||||| | || || ||||| Sbjct 18578698 GGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCA 18578757 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || | || | || ||||| Sbjct 18578758 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTTGCTGACTATAA 18578817 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || || || || ||| | || | || |||| Sbjct 18578818 CATCCAGAAGGAGTCCACCCTGCACCTTGTCCTTCGTCTTCGTGGAGGTA 18578867 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 18579077 CATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGTCATC 18579136 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||||||| | || || ||||| Sbjct 18579137 GGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCA 18579196 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| || || | ||| ||||| Sbjct 18579197 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTATAA 18579256 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| || || || || || Sbjct 18579257 CATCCAGAAGGAGTCGACCCTGCACCTTGTTCT 18579289 >seq9 Length=14105664 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||| || | || || || ||||||||| | |||||||||||||| |||||||| Sbjct 7866117 GGACAAGGAGGGGATCCCTCCAGATCAGCAGCGTTTGATATTCGCTGGCAAGCAGTTGGA 7866176 Query 31345 AGACTCTATG-ACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTAC 31403 || | | | || || || || |||||||| || || || |||||||| |||| | Sbjct 7866177 GGA-TGGACGCACACTGGCTGACTACAACATTCAGAAGGAGTCAACTCTTCACTTGGTCC 7866235 Query 31404 TTAGACTGAGGGGCGG 31419 | || || ||||| || Sbjct 7866236 TCAGGCTCAGGGGTGG 7866251 >seq1 Length=33916305 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| || || || ||||| | || || || | Sbjct 9799479 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 9799420 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || | || ||||||||| || | ||||| ||| Sbjct 9799419 TCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGAC 9799360 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | || ||| || | ||| || Sbjct 9799359 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTAC 9799300 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || || ||||| || Sbjct 9799299 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 9799265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445752519948720