Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 4e-14 >seq8 Length=18224760 Score = 91.5 bits (100), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 13/176 (7%) Strand=Plus/Minus Query 19414 TAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTA 19473 ||||||| ||||| || |||||||| ||||| | || ||| | |||||||||||||||| Sbjct 9460981 TAGATATTGATGGTATTCGTGAGCCTGTTTCTAGTTCTTTACTTTACGGAAACAATATTA 9460922 Query 19474 TTTC---TGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCT 19530 | || ||| || | |||| | || || || ||| || ||||||| || || | Sbjct 9460921 TCTCTGTTGGTGCCATTATTCCTACTTCTGGGGCGATCGGATTGTACTTTTACCCAATTT 9460862 Query 19531 GGGAAGCCG---------GCA-CTTTAGATGAGTGGTTATACAACGGCGGTCCATA 19576 | ||||| | ||| || | ||||||||||||||||| || ||||| || Sbjct 9460861 GAGAAGCTGCATCTGTTTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTA 9460806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144437327327196