Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 113 5e-20 seq5 113 5e-20 seq1 113 5e-20 seq4 104 2e-17 seq2 104 2e-17 seq3 86.0 6e-12 seq9 84.2 2e-11 >seq6 Length=21794218 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| || |||| || || || || || |||||||| || || | |||||| | Sbjct 19645929 CTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA 19645870 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || |||||||||||||| || | ||||| ||||||||||| || ||||| || || || Sbjct 19645869 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTG 19645810 Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || | | || ||||| || || | ||||| || ||||| || | || | Sbjct 19645809 TCCTGGA-TCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGAT 19645751 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||| | || || || ||||| ||||| Sbjct 19645750 GGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCAT 19645715 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| || || | || ||||| || || |||||||| || || | |||||| | Sbjct 19646157 CTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA 19646098 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || |||||||||||||| || | ||||| ||||||||||| ||||| || || || || Sbjct 19646097 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 19646038 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||| || || | || || || || || || | || | | Sbjct 19646037 TCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATG 19645978 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||||||| ||||| ||||| || ||||| Sbjct 19645977 GTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| ||||| | || ||||| || || |||||||| || || | |||||| | Sbjct 19646385 CTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA 19646326 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || |||||||||||||| || | ||||| ||||||||||| ||||| || || || || Sbjct 19646325 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 19646266 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||| || || | || || || || || || | ||| | | Sbjct 19646265 TCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATG 19646206 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||||| || || ||||| || ||||| Sbjct 19646205 GTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 19646171 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || || || || || ||||||||||| || | ||| ||| | || Sbjct 19646838 AGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCGCCCATCC 19646779 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||||||| | || || ||||||||||| || ||||| || || || || Sbjct 19646778 TCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 19646719 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | || | |||| Sbjct 19646718 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAAGGTGATGGTC 19646659 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || || || || ||||| Sbjct 19646658 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || ||||| || || | || ||||| || || |||||||| || || | ||||| | Sbjct 19646613 CTGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCA 19646554 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || ||||||||||||||| | ||||| ||||||||||| || || || || || || Sbjct 19646553 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTG 19646494 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||| || || | || || || || || || | || | | Sbjct 19646493 TCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATG 19646434 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || | || || ||||| || ||||| Sbjct 19646433 GTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 19646399 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || | ||| | ||| || || || |||||||||||||| || | ||||| | Sbjct 18102165 CTCAGGACCAAATGGAGCGTTGACTCCTTCTGAATGTTGTAATCAGCTAATGTGCGTCCA 18102106 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| || ||||| || ||| |||| |||| ||||| || || ||||| || ||||| Sbjct 18102105 TCTTCCAGTTGCTTCCCTGCAAAAATCAGCCTTTGCTGATCTGGGGGAATACCCTCTTTG 18102046 Query 64349 TCTTG 64353 || || Sbjct 18102045 TCCTG 18102041 >seq5 Length=20131956 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | ||||| || || | ||||| || || || |||||||| || ||| Sbjct 2692004 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2691945 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 2691944 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 2691885 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || || ||||| Sbjct 2691884 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 2691825 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || |||| || || ||||| || ||||| || Sbjct 2691824 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 2691775 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || || |||||||| || || | ||| | |||| Sbjct 16284218 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCC 16284159 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| ||||||||| | || || ||||||||||| || ||||| || || || || Sbjct 16284158 TCGAGCTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16284099 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| || | ||||| || ||||| || | || | |||| Sbjct 16284098 TGGATCTTTGCCTTAACATTGTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTC 16284039 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || || || |||||||| Sbjct 16284038 TTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 16284007 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 |||||||| || | || || || || || |||||||| || || | |||||| | || Sbjct 16284446 AGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 16284387 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | ||||| | |||||| || || ||||| || || || || Sbjct 16284386 TCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 16284327 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || || | || || | || || || | || | ||| Sbjct 16284326 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATAGTC 16284267 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||||| | ||| || ||||||||||||||| Sbjct 16284266 TTGCCGGTGAGAGTCTTGACGAAAATTTGCATT 16284234 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || ||||| ||||| || || | |||||| | || Sbjct 16284674 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCG 16284615 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || |||||||||||||| ||||| || ||||| || || Sbjct 16284614 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 16284555 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | ||| | |||| Sbjct 16284554 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 16284495 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||| || || || || ||||| Sbjct 16284494 TTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 16284463 >seq1 Length=33916305 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | ||||| || || | ||||| || || || |||||||| || ||| Sbjct 9799250 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9799309 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 9799310 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 9799369 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || || ||||| Sbjct 9799370 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9799429 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || |||| || || ||||| || ||||| || Sbjct 9799430 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9799479 >seq4 Length=21479432 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || ||||| || ||||| | || ||| | || ||||||||||||||| Sbjct 18578379 GTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCCTCAAGCTGCTTGCCG 18578320 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| ||||| ||||| || || || || || || ||| Sbjct 18578319 GCGAATATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTC 18578260 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| || || || || | || | ||||||||| || | || Sbjct 18578259 ACATTGTCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 18578200 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 18578199 TTAACGAATATCTGCAT 18578183 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||| || ||||| | |||||| | || || ||||||||||| Sbjct 18578607 GTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 18578548 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| || || ||||| || || || || || || ||| Sbjct 18578547 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 18578488 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||| || | || || |||| || | |||||||| || | || Sbjct 18578487 ACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTCTTGCCAGTGAGGGTC 18578428 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 18578427 TTCACGAAGATCTGCAT 18578411 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || ||||| || || || | |||||| | || || |||||||||||| Sbjct 18579274 GTCGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 18579215 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || ||||| || || || || || ||| Sbjct 18579214 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 18579155 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | |||||||||||| | || Sbjct 18579154 ACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTC 18579095 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 18579094 TTCACGAAGATCTGCAT 18579078 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || ||||| || || || | |||||| | || Sbjct 18578851 AAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATC 18578792 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| | ||||| ||||||||||| || || || ||||| || || Sbjct 18578791 CTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 18578732 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || || || | || | ||| Sbjct 18578731 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGT 18578672 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || ||||| |||||||| Sbjct 18578671 CTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 18578639 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||| || ||||| | |||||| | || || |||||||||||| Sbjct 18579046 GTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 18578987 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | ||||| ||||||||||| || || || ||||| || || || || || Sbjct 18578986 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTT 18578934 >seq2 Length=27082872 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| || || |||||||| || || | ||| | | || |||||||||||||| Sbjct 2373552 GTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCA 2373611 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| ||||| || || || || || || || || ||| Sbjct 2373612 GCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 2373671 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | ||||| || | || | ||||||||| |||| ||| Sbjct 2373672 ACGTTGTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTC 2373731 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2373732 TTGACGAAGATCTGCAT 2373748 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || || || || |||||||| || |||| ||| || | || Sbjct 2372853 AGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCATCC 2372912 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || || ||||||||||| || || || || || || || Sbjct 2372913 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 2372972 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || ||||| | ||| | |||| Sbjct 2372973 TGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCAACTTCCAAAGTGATGGTC 2373032 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || || || || ||||| Sbjct 2373033 TTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || || || || || ||||| || || || | ||| | | || Sbjct 2373309 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373368 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | ||||| ||||||||||| || || || ||||| || || Sbjct 2373369 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373428 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| | ||||| || | || | ||| Sbjct 2373429 TGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 2373488 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| ||| || ||||| || ||||| Sbjct 2373489 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| ||||| || || || |||||||| || || | ||| | | || Sbjct 2373765 AGAACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCC 2373824 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | ||||| |||||||| || || || || || || || || Sbjct 2373825 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 2373884 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || ||| | ||||| || | || | ||| Sbjct 2373885 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTC 2373944 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| ||| |||||||| || ||||| Sbjct 2373945 TTGCCAGTCAGAGTCTTTACGAAGATCTGCAT 2373976 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| |||||||| || || | ||| | |||| || |||||||||||| Sbjct 2374008 GTTGACTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCG 2374067 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| |||||||| || || || || || || || || || || || ||| Sbjct 2374068 GCAAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 2374127 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | ||||| || | || | ||||||||||||| || Sbjct 2374128 ACGTTATCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTC 2374187 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 2374188 TTCACAAAGATCTGCAT 2374204 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | || || || || || ||||| || || || | ||| | | || Sbjct 2373080 AAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATC 2373139 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| | ||||| ||||||||||| || || || ||||| || || Sbjct 2373140 CTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 2373199 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | ||||| | || || || | ||| | || Sbjct 2373200 CTGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTCTCAACCTCCAGAGTGATCGT 2373259 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || || || || ||||| Sbjct 2373260 CTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 >seq3 Length=29620734 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | || || || || || | ||| || || || || |||||||| || || Sbjct 6271918 ACCGCCACGGAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGC 6271977 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || |||||||| ||||| | || |||||||||||||| || || Sbjct 6271978 CAGGGTGCGACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 6272037 Query 64336 AATTCCT 64342 |||||| Sbjct 6272038 GATTCCT 6272044 >seq9 Length=14105664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || || || | ||| || || || || |||||||| || || Sbjct 13888721 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCA 13888662 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || |||||||||||||| | ||||| ||||||||||| || || Sbjct 13888661 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 13888602 Query 64337 ATTCCT 64342 || ||| Sbjct 13888601 ATGCCT 13888596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499629242310040