Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 197 1e-45 seq5 136 4e-27 seq2 122 8e-23 seq1 95.1 1e-14 seq9 91.5 1e-13 >seq6 Length=21794218 Score = 197 bits (218), Expect = 1e-45 Identities = 351/505 (70%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 47075 CGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGC 47134 ||||||| | |||||||| ||||||||| | || || || | | || | || Sbjct 6279020 CGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCGGCGAG--CGCT-TCGC 6278964 Query 47135 CGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGG 47193 ||| || | | || |||||| ||||||||| |||||||||||||| ||| |||| Sbjct 6278963 CGAGCGCCTCGTTGCCTTCGCCTGTGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGCGC 6278904 Query 47194 CGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAA 47253 | || || | | || | || | ||||| ||||||||||| ||||||||| | Sbjct 6278903 C-ATCTTCTGGCTAAAGAAGCGCGGCCTAATGCCGGGCCTCACGTTCTCCAACGAGCTCA 6278845 Query 47254 TCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCG 47313 |||| | ||||| ||||||||| | |||| ||||| ||| |||| || || || Sbjct 6278844 TCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TCC 6278788 Query 47314 ATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGA 47373 ||| | |||| | | |||| |||| || ||||||| ||||||| ||| |||| Sbjct 6278787 GCGGCAAGCTCGACGAGGTCCGCGTCCGCGAGATCGTTGCCGACGCCGTCGACATCGAGA 6278728 Query 47374 TGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGA 47433 |||||| || ||| || || |||| | | || || ||||||| || | |||| Sbjct 6278727 GGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGA 6278668 Query 47434 GAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT 47493 | |||||||||| || |||||||||||||| ||| | || | ||||| | Sbjct 6278667 GCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCCCTGGGCTGCAAGAAGATGT 6278608 Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553 || || || || |||||||| | ||| | ||| || || ||||||||||||||| Sbjct 6278607 ACAACGTCGCCAACCCATTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACT 6278548 Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578 | |||||||||||||||||||| || Sbjct 6278547 TCTTCGAGAAGCGCGTCGGCGACTA 6278523 Score = 185 bits (204), Expect = 8e-42 Identities = 358/521 (69%), Gaps = 8/521 (2%) Strand=Plus/Plus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||| | | | ||| ||||||| | |||||||| ||||||||| | || || || Sbjct 907159 TCGACACCGTCCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCG 907218 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | | || | ||||| || | |||| |||||| ||||||||| ||||||||| Sbjct 907219 GCGAG--CGCT-TCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCT 907275 Query 47179 CGGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACG 47237 ||||| ||| |||| | || || | | || | || | ||||| |||||||| Sbjct 907276 CGGGCTCCTTCTGCGCC-ATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGCCTCACC 907334 Query 47238 TTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTAC 47297 || ||||||||| ||||| | ||||| ||||| ||| | |||| ||||| ||| Sbjct 907335 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTA 907394 Query 47298 TACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAA 47357 ||| || || || ||| | |||| | || |||| |||| || | ||||| Sbjct 907395 TACGAC-CTCC--TCCGCGGCAAGCTCGACGAGTCCCGCGTCCGCGAGATCGTCGCCGAC 907451 Query 47358 GCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATG 47417 ||||||| ||| |||| ||| || || ||| || || |||| | | || || ||| Sbjct 907452 GCCGTCGACATCGAGAGGGAATTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATG 907511 Query 47418 AACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTA 47477 |||| || | ||||| |||||||||| || |||||||||||||||||| | ||| Sbjct 907512 AACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCATGGCGCTC 907571 Query 47478 AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTC 47537 | ||||| ||| | || || || ||||| | ||| | ||| || || Sbjct 907572 GGCTGCAAGAAGATGTACAAGGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTG 907631 Query 47538 GAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||||||||||| |||||||||||||||||||| || Sbjct 907632 CAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 907672 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || || || ||||| || ||| ||||| ||| || ||||| || ||| Sbjct 19646139 GTAGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 19646080 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||||||| ||| || ||| Sbjct 19646079 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 19646020 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||||| |||||| || | || | || ||||||||||| || Sbjct 19646019 ACGTTGT-CGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGT 19645961 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 19645960 TTTGACGAAGATCTGCAT 19645943 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 || ||||| || | || ||||| || || || ||||| || ||| ||||| ||| Sbjct 19645927 CAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATC 19645868 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || ||||| || |||||| |||| | |||||||| || || || |||||||||||||| Sbjct 19645867 CTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 19645808 Query 127021 CGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCG 127079 | ||| || |||| ||||| | | ||| |||| ||| || || | ||| | | Sbjct 19645807 CTGGATCTTGGCTTTGACGTTGT-CAATGGTATCCGAGGACTCCACCTCAAGGGTGATGG 19645749 Query 127080 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||||||| || || || |||||||||||||| Sbjct 19645748 TCTTGCCGGTGAGTGTCTTCACAAAAATCTGCAT 19645715 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||||||| | || ||||| || || || |||||||| | Sbjct 19646853 CCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCA 19646794 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || || |||||| |||||||| || || || Sbjct 19646793 AGGGTCCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGA 19646734 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||| | |||| |||| ||||||| ||| || Sbjct 19646733 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG-TCGATCGTGTCCGAGGACTCAAC 19646675 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 19646674 CTCCAAGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | || || || || || || ||||| || ||| ||||| ||| || Sbjct 19646380 CACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 19646321 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | |||||||| || ||||| ||||||||||||||| Sbjct 19646320 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 19646261 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||| | |||| |||| ||||| | |||||| || | || | || | Sbjct 19646260 GATCTTGGCCTTCACGTTG-TCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGGTCT 19646202 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | |||||||| || || || || ||||||||| || Sbjct 19646201 TTCCGGTCAGGGTCTTGACGAAGATCTGCATGCCT 19646167 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || ||||| ||||| | ||| ||| || |||||||| || Sbjct 19269444 GTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCGGCCATCCTCAAGCTGTTTCCCG 19269503 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| ||||||| ||| || || ||||||||||||||| |||||| |||| Sbjct 19269504 GCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTG 19269563 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | || || | ||| || || | ||| | ||||| ||||| ||||| Sbjct 19269564 ACATTATCAATAGTATCTGAGGACTCAACCTCAAGGGTGATGGTTTTCCCGGTGAGAGTC 19269623 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 19269624 TTCACAAAGATCTGCAT 19269640 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || || || || || || ||||| || ||| ||||| ||| || Sbjct 19646608 CACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCATCCTC 19646549 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || || |||| | |||||||| || || || || |||||||||||| Sbjct 19646548 GAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 19646489 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||| | |||| || | ||||||| |||||| || | || | || | Sbjct 19646488 GATCTTGGCCTTCACGTTG-TCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCT 19646430 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| || || || || || || ||||||||| || Sbjct 19646429 TGCCAGTAAGGGTCTTGACGAAGATCTGCATGCCT 19646395 >seq5 Length=20131956 Score = 136 bits (150), Expect = 4e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || ||||||||||| ||| | | ||||| |||||| Sbjct 16284672 CACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCGTC 16284613 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||||| |||||||| || ||||| ||||| ||||||||| Sbjct 16284612 CAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTG 16284553 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||| | |||| |||| |||||| | ||||| || || | || | || | Sbjct 16284552 GATCTTCGCCTTCACGTTG-TCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTCT 16284494 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || ||||| || ||||| ||||||||| Sbjct 16284493 TGCCTGTGAGAGTCTTGACAAAGATCTGCATG 16284462 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | | ||||| ||| || ||||| || ||| Sbjct 16284431 GTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 16284372 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || ||||||||| || || ||||||||||||||| ||| || ||| Sbjct 16284371 GCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 16284312 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||||| || |||| ||| | || |||||||| ||||| Sbjct 16284311 ACGTTG-TCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATAGTCTTGCCGGTGAGAGT 16284253 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 16284252 CTTGACGAAAATTTGCAT 16284235 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 2692007 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 2691948 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| || || Sbjct 2691947 GCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGC 2691888 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || ||||||||||||||| ||| || ||| | |||| |||| |||||||| ||| Sbjct 2691887 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 2691829 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | || || || ||||| || || || || |||||||| Sbjct 2691828 CACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 2691778 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || ||||| ||||| || ||| || | ||| || Sbjct 16283988 CACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCCAGGGTCCTGCCATCCTC 16283929 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | || ||||| || || || || |||||||||||| Sbjct 16283928 GAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTG 16283869 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||||| |||| || | |||||| | ||| || || | ||| | || | Sbjct 16283868 GATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAGGACTCAACCTCAAGGGTTATGGTCT 16283810 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || || || || ||||| |||||||| Sbjct 16283809 TGCCAGTGAGTGTCTTCACAAAGATCTGCAT 16283779 >seq2 Length=27082872 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| || | ||| || ||||| || ||| Sbjct 2373780 GTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2373839 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || ||||||||||||||| ||| || |||| Sbjct 2373840 GCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2373899 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | |||||| | | ||| || |||| ||| | || ||||| |||||||| Sbjct 2373900 ACGTTG-TCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGT 2373958 Query 127096 TTTTACAAAAATCTGCATG 127114 ||||| || ||||||||| Sbjct 2373959 CTTTACGAAGATCTGCATG 2373977 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| ||| | Sbjct 2372838 CCACCACGGAGACGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2372897 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || ||| |||||| |||||||| || || || Sbjct 2372898 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 2372957 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | |||||||| ||||| ||| Sbjct 2372958 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCAACT 2373017 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| || || ||||| |||||||| Sbjct 2373018 TCCAAAGTGATGGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || ||||| || | | || | || || ||||| || || Sbjct 2374008 GTTGACTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCG 2374067 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | ||||||||||| || || ||||||||||||||| ||| || |||| Sbjct 2374068 GCAAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 2374127 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || |||| ||| | || ||||||||||| || Sbjct 2374128 ACGTTATCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTC 2374187 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2374188 TTCACAAAGATCTGCAT 2374204 Score = 102 bits (112), Expect = 8e-17 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || ||||| |||| | |||||||| || ||||| ||||||||||| Sbjct 2373593 ATCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTT 2373652 Query 127018 GTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 |||| ||| || ||||| |||| || | |||||| | | || || |||| ||| | Sbjct 2373653 GTCCTGGATCTTAGCCTTGACGTTG-TCAATGGTGTCAGAAGATTCCACCTCGAGGGTGA 2373711 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| |||||||| || || || ||||||||| Sbjct 2373712 TGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCATG 2373749 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || || || || | Sbjct 2373294 CCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 2373353 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || ||||| |||| | |||||||| || || || Sbjct 2373354 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 2373413 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||||||| ||| || ||||| | |||| ||||| | | ||| || Sbjct 2373414 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACC 2373473 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | ||| | || |||||||||||||| || || || ||||||||| || Sbjct 2373474 TCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATGCCT 2373524 >seq1 Length=33916305 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 9799247 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9799306 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| || || Sbjct 9799307 GCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGC 9799366 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| || ||| | |||| |||| |||||||| ||| Sbjct 9799367 GGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 9799425 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | || || || ||||| || || || || |||||||| Sbjct 9799426 CACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9799476 >seq9 Length=14105664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || ||||| ||||| || ||| ||||| ||| || Sbjct 7866233 ACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGCCAGTGTGCGTCCATCCTCC 7866174 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC-GT 127023 | ||| || |||||| | ||||| ||||||||||| ||||| || |||||||||||| || Sbjct 7866173 AACTGCTTGCCAGCGAATATCAAACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGT 7866114 Query 127024 GA 127025 || Sbjct 7866113 GA 7866112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475485994093840