Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5 156 5e-33 seq1 150 2e-31 seq6 123 3e-23 seq4 120 3e-22 seq2 118 1e-21 >seq5 Length=20131956 Score = 156 bits (172), Expect = 5e-33 Identities = 165/215 (77%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 2691987 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 2691928 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | || |||||||||| Sbjct 2691927 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 2691868 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||| | ||| | | | ||||| || ||||| |||| ||||||||| | Sbjct 2691867 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCT 2691809 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||||||| || || || ||||| ||||| ||| Sbjct 2691808 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 2691774 Score = 127 bits (140), Expect = 2e-24 Identities = 159/214 (74%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| || ||||||||||||| || ||||| | ||||| Sbjct 16284672 CACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCGTC 16284613 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| ||||||||||| | || | || ||||||||| Sbjct 16284612 CAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTG 16284553 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559 ||||||| ||| | ||| | | | ||||| |||| || || |||| || |||| Sbjct 16284552 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGG 16284497 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || || || || |||||||| ||||| Sbjct 16284496 TCTTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 16284463 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | ||| || | |||| |||||||| |||||||| || Sbjct 16284198 CTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCCTCGAGCTGTTTGCCGGCAAA 16284139 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 16284138 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATT 16284079 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||| || ||||| || | |||||||| || || |||| || || || Sbjct 16284078 GTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTGAC 16284019 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 16284018 AAAGATTTGCAT 16284007 Score = 102 bits (112), Expect = 9e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | || | |||||| || | || |||||| || || |||||||| | Sbjct 16284007 TGCCTCCCCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 16283948 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || |||||||||||||| ||||| || | || |||||||| | | Sbjct 16283947 CCAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGG 16283888 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | | |||||||||| |||||| ||||| ||| | | | |||||| || || Sbjct 16283887 GGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGGACTCA 16283829 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || ||||| ||||| || || || || |||||||| ||||| Sbjct 16283828 ACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 16283779 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || || || | ||| || || | ||| |||||| ||||| |||||||| | Sbjct 16284463 TGCCACCCCTCAAGCGGAGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 16284404 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || ||||||||||| ||||| || | | |||||| || | | Sbjct 16284403 CAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGG 16284344 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | || |||||||||| |||||| ||| | ||| | | | ||||| |||| Sbjct 16284343 GAATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGTTGTCGATGGTGTCTGAGCTC--- 16284288 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || || | || || || ||||| || || || || || || ||||||||| Sbjct 16284287 TCAACCTCGAGGGTAATAGTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCATT 16284234 >seq1 Length=33916305 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 9799267 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 9799326 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | ||| | | |||||||||| Sbjct 9799327 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 9799386 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||| | ||| | | | ||||| || ||||| |||| ||||||||| | Sbjct 9799387 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCT 9799445 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||||||| || || || ||||| ||||| ||| Sbjct 9799446 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 9799480 >seq6 Length=21794218 Score = 123 bits (136), Expect = 3e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | | | ||| || || | ||| ||||| ||||| |||||||| | Sbjct 19646171 TGCCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAG 19646112 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || ||||||||||| ||||| || | ||||||||||| | | Sbjct 19646111 CCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 19646052 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| ||| | ||| | | | |||||| || || Sbjct 19646051 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGAGGACTCG 19645993 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 19645992 ACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||| | || |||||| ||||| ||||| || | || || ||| | || || Sbjct 19646836 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCGCCCATCCTC 19646777 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||| || |||| ||||||||||| | || | | |||||||||| Sbjct 19646776 AAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 19646717 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||| | ||| | | | |||||| || || || |||| |||||||| | Sbjct 19646716 GATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGAGGACTCAACCTCCAAGGTGATGGTCT 19646658 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || |||||||| ||||| Sbjct 19646657 TGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 113 bits (124), Expect = 5e-20 Identities = 172/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | || |||||| || | || |||||| ||||| |||||||| | Sbjct 19645941 CCTCCCCTGAGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 19645882 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| ||||| || | ||||||||||| | || Sbjct 19645881 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 19645822 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| |||||| |||| ||| | | | || || || ||||| Sbjct 19645821 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCAATGGTATCCGAGGACTCCAC 19645763 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAACA 46605 || | |||||||| ||||| || || || || ||||| || |||| | ||||| ||| Sbjct 19645762 CTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCA-TCTGCACGCACA 19645704 Query 46606 A 46606 | Sbjct 19645703 A 19645703 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | | | ||| ||||| | || ||||| ||||| |||||||| | Sbjct 19646399 TGCCTCCCCTGAGCCTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 19646340 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || ||||||||||| ||||| || | ||||||||||| | | Sbjct 19646339 CCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 19646280 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| ||| | ||| | | | |||||| || || Sbjct 19646279 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAGGACTCG 19646221 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| || || ||||| || || || ||||| ||||| Sbjct 19646220 ACCTCAAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 19646171 Score = 105 bits (116), Expect = 8e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| | || ||||| | || ||||||||||||||||| || Sbjct 19646589 TCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 19646530 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 19646529 ATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646471 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | |||||||| ||||| || || || || || Sbjct 19646470 GTCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTAAGGGTCTTGAC 19646411 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 19646410 GAAGATCTGCAT 19646399 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| ||| |||||| |||||||| || || || || ||| | || || Sbjct 19269431 CACGAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCGGCCATCCTC 19269490 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||| || ||||| || ||||||||||||| || | || | || |||||||||| Sbjct 19269491 AAGCTGTTTCCCGGCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTCCTTGTCCTG 19269550 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || ||||| | | | || || || || || || | ||||||||||| Sbjct 19269551 GATTTTGGCCTTGACATTATCAATAGTATCTGAGGACTCAACCTCAAGGGTGATGGTTTT 19269610 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 19269611 CCCGGTGAGAGTCTTCACAAAGATCTGCAT 19269640 >seq4 Length=21479432 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||| | || ||||| | || |||||||||||||||||||| Sbjct 18578830 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 18578771 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || ||||||||| |||||| ||| | ||| Sbjct 18578770 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 18578712 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || |||| |||||||| ||||| || || || || | Sbjct 18578711 TGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCA 18578652 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 18578651 CGAAGATTTGCAT 18578639 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| || ||||||| || ||||| | Sbjct 18579292 CGCAGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCA 18579233 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||||||||| || | |||||||||||| | || | || |||||| Sbjct 18579232 TCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTG 18579173 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||| | ||| | | | ||||| || || || |||| ||||| Sbjct 18579172 TCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGAT 18579114 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||| ||||| Sbjct 18579113 GGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18579078 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || ||||| ||||| || ||||| | || || ||| | || || Sbjct 18578391 ACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCCTCA 18578332 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||||||||| | ||||||||||| | || | | |||||||||| | Sbjct 18578331 AGCTGCTTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGG 18578272 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||| ||| || || || |||| |||||||| ||| Sbjct 18578271 ATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTCTTG 18578212 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || || ||||| Sbjct 18578211 CCAGTGAGGGTCTTAACGAATATCTGCAT 18578183 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||| ||||| || ||||| | || ||||| | || ||| Sbjct 18579058 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCG 18578999 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| || | |||||||||||| | || | || ||||||||| | Sbjct 18578998 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGG 18578939 Query 46505 ATCTT 46509 ||||| Sbjct 18578938 ATCTT 18578934 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||| ||||| || ||||| | || ||||| | || ||| Sbjct 18578619 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCG 18578560 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | ||||||||||| | || | | |||||||||| | Sbjct 18578559 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGG 18578500 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||||| ||| || || || | || || || ||| Sbjct 18578499 ATCTTGGCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTCTTG 18578440 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| ||||| Sbjct 18578439 CCAGTGAGGGTCTTCACGAAGATCTGCAT 18578411 >seq2 Length=27082872 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | || || | |||| || |||||||||||||| || Sbjct 2374013 CTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAA 2374072 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||||| |||||| ||||| | Sbjct 2374073 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 2374132 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||| ||||| || | ||||| || ||||| ||||| || || || Sbjct 2374133 ATCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTCTTCAC 2374192 Query 46582 AAAGATTTGCATTTTGCACAAACAA 46606 |||||| ||||| | | |||||| Sbjct 2374193 AAAGATCTGCATCTGCAAGAAACAA 2374217 Score = 116 bits (128), Expect = 4e-21 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | ||| |||||| ||||| |||||||||| || || || | Sbjct 2372849 ACGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCC 2372908 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| |||| ||||||||||| | || | | |||||| Sbjct 2372909 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATCCCCTCCTT 2372968 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| |||||| ||| | | | | ||||| |||| || || |||| || Sbjct 2372969 GTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTC---TCAACTTCCAAAGT 2373025 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || |||| || || |||||||| ||||| Sbjct 2373026 GATGGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | || || || | || ||||| ||||| |||||||| | Sbjct 2373520 TGCCTCCCCTGAGACGGAGGACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAG 2373579 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || || ||||||||||| || || || | ||||||||||| | | Sbjct 2373580 CAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGAG 2373639 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| ||||| ||| | | | ||||| |||||| Sbjct 2373640 GGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCAATGGTGTCAGAAGATTCC 2373698 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||||||||| || || || ||||| ||||| Sbjct 2373699 ACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 2373748 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || ||||||||||| ||||| Sbjct 2373785 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 2373844 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||||| |||||| ||||| ||| Sbjct 2373845 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2373903 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| || | ||||| || ||||| ||||| || || | Sbjct 2373904 TGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTTA 2373963 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2373964 CGAAGATCTGCAT 2373976 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | || |||||| ||||| || ||||| | || || | | Sbjct 2373305 ACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCC 2373364 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| || || || | ||||||||||| | || | || ||||| Sbjct 2373365 ATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTT 2373424 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||| || ||||| || | ||||| Sbjct 2373425 GTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGAT 2373484 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| ||||| || || || ||||| ||||| Sbjct 2373485 AGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | ||| |||||| ||||| || ||||| | || || | | Sbjct 2373077 ACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCC 2373136 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| || || || | ||||||||||| | || | || ||||| Sbjct 2373137 ATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTT 2373196 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| |||||| ||| | | | | || || |||| || || |||| || Sbjct 2373197 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTC---TCAACCTCCAGAGT 2373253 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || ||||| || || || || |||||||| ||||| Sbjct 2373254 GATCGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565220799889320