Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 347 1e-90 seq5 140 3e-28 seq1 140 3e-28 seq2 113 5e-20 seq7 89.7 5e-13 seq9 82.4 8e-11 >seq6 Length=21794218 Score = 347 bits (384), Expect = 1e-90 Identities = 619/885 (70%), Gaps = 30/885 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || |||| || ||| |||||| Sbjct 907678 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGC 907619 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || |||||||| ||||| ||| ||| | || | | |||| Sbjct 907618 TCCATCCAGTCGAACGGGTTGGCGACCTTGTACATCTTCTTGCAGCCGAGCGCCATGAGC 907559 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | |||||| |||||||||||||| || |||| |||| || | || | || Sbjct 907558 AGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAG- 907500 Query 132784 CGC-ACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 ||| || || ||||| ||| || ||| | | ||||||| |||| ||||||| ||||| Sbjct 907499 CGCGACGGGGAGCGCGTCGCAGACGAATTCCCT-CTCGATGTCGACGGCGTCGGCGACGA 907441 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGC--TTGAACATCAAGCAAGC 132899 | || | ||||| | | || ||| | |||| | | | | | | | | ||| || Sbjct 907440 TCTCGCGGACGCGGGACTCG-TCGAGC-TTGCCGCGGAGGAGGTCGTATAGGAGGCAGGC 907383 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| || | ||||||||| | ||| ||||| |||||| ||| || | ||| || Sbjct 907382 GAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGG 907323 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 |||||||||||| || |||||||| || |||||| ||| |||||| ||||||| || Sbjct 907322 CATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCC 907263 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||||||| ||||| || || ||||||||| |||| | || || | ||||||| Sbjct 907262 CTCGACGCAGGCGAAGGCGACGAGGCGCTCGGCGAA---GCGCTCGCCGCCGTCGATCCA 907206 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTTCA 133135 ||||| ||||| ||||||| | | |||||||| | || ||||||||| | Sbjct 907205 GCGCATGGCCCAGTCGGCCT----TGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGA 907150 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | ||| ||||| | | || | |||||| |||| || ||| ||||| | Sbjct 907149 AGAGGCGGTCCTTCTCGACGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCT 907090 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 ||||||| | |||||| |||||||| || |||||||| ||| || |||||| | |||| Sbjct 907089 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGCGACCT 907030 Query 133256 GCACTTCTTGAGCGAAACGCTCGA--CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 |||| || || ||| || || | || || ||| |||||||||||| ||| || Sbjct 907029 GCACGTC-GGACATGAAC-CTGGACGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCCGC 906972 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC----TCCC 133369 ||| ||||| |||||||| |||||| || | ||||| | | | ||||| |||| Sbjct 906971 GAAGAAGGCGAGCACGTGGGAGATGAAGTGCCTCTCGTCGGGGGAC-AGCGCGGCGTCCC 906913 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| ||||| ||| ||| |||||||||||||| | ||||| ||||||||| | || | Sbjct 906912 AGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCT 906853 Query 133430 TTTTGTACATACT-CCACATGTCCGAATATTGTATGGGAAAAATC 133473 | ||||| | ||| ||| || | || || | ||||| || ||| Sbjct 906852 TCTTGTAGA-ACTCCCAGATCTGCGGGTACCGGATGGGGAACATC 906809 Score = 347 bits (384), Expect = 1e-90 Identities = 620/885 (70%), Gaps = 30/885 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || |||| || ||| |||||| Sbjct 6278517 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGC 6278576 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || |||||||| |||||| ||| ||| | |||| | | ||| Sbjct 6278577 TCCATCCAGTCGAATGGGTTGGCGACGTTGTACATCTTCTTGCAGCCCAGGGCCATGAGG 6278636 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | |||||| |||||||||||||| || |||| |||| || | || | || Sbjct 6278637 AGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAG- 6278695 Query 132784 CGC-ACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 ||| || || ||||| ||| || ||| | | ||||||| |||| ||||||| |||| Sbjct 6278696 CGCGACGGGGAGCGCGTCGCAGACGAACTCCCT-CTCGATGTCGACGGCGTCGGCAACGA 6278754 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGC--TTGAACATCAAGCAAGC 132899 | || | ||||| || || ||| | |||| | | | | | | | | ||| || Sbjct 6278755 TCTCGCGGACGCGGACCTCG-TCGAGC-TTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGC 6278812 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| |||| ||||||||| | ||| ||||| |||||| ||| || | ||| || Sbjct 6278813 GAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAACGTGAGGCCCGG 6278872 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| |||||||| || || ||||| || |||||| ||| |||||| ||||||| ||| Sbjct 6278873 CATTAGGCCGCGCTTCTTTAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCC 6278932 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 |||||| ||||| || || ||||||||| |||| ||| | || | ||||||| Sbjct 6278933 CTCGACACAGGCGAAGGCAACGAGGCGCTCGGCGAAGC--GCT-CGCCGCCGTCGATCCA 6278989 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTTCA 133135 ||||| ||||| |||||||| | |||||||| | || || |||||| | Sbjct 6278990 GCGCATGGCCCAGTCGGCCTTGC----GGCGCACGGCGGGGACGGTGTCTATGGCGCGGA 6279045 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | ||| ||||| | | || | |||||| |||| || ||| ||||| | Sbjct 6279046 AGAGGCGGTCCTTCTCGACGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCT 6279105 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 ||||||| | |||||| |||||||| || |||||||| ||| || |||||| | |||| Sbjct 6279106 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGCGACCT 6279165 Query 133256 GCACTTCTTGAGCGAAACGCTCGACCAGA--TTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 |||| || || ||| || ||| || || ||| ||||||||||| || || Sbjct 6279166 GCACGTCG-GACATGAAC-CTGGACGCGAGGTTCTCGAGCACGATGCCGTCCGACGCCGC 6279223 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC----TCCC 133369 ||| |||||||||||||| |||||| |||||||||| | | | ||||| |||| Sbjct 6279224 GAAGAAGGCCAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAC-AGCGCGGCGTCCC 6279282 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| ||||| ||| ||| ||||| ||||||||| | ||||| ||||||||| | || | Sbjct 6279283 AGTGGCGCGCGTCGGAGGAGAGGTCGACCTCCTCGGCCGTCCAGAACGACGCCACCGCCT 6279342 Query 133430 TTTTGTACATACT-CCACATGTCCGAATATTGTATGGGAAAAATC 133473 | ||||| | ||| ||| || | || || | ||||| || ||| Sbjct 6279343 TCTTGTAGA-ACTCCCAGATCTGCGGGTACCGGATGGGGAACATC 6279386 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||||||| | || || ||| || | Sbjct 19645715 ATGCAGATTTTTGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCG 19645774 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | |||| || |||| ||||| ||||| |||||| | ||||| Sbjct 19645775 GATACCATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 19645833 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 19645834 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAA 19645893 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||||| ||||| | || || || |||||||| Sbjct 19645894 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTG 19645927 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || |||||| || | Sbjct 19645943 ATGCAGATCTTCGTCAAAACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 19646002 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 19646003 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 19646061 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 19646062 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAA 19646121 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| |||||| | || || || | ||||| Sbjct 19646122 CATCCAGAAGGAATCTACCCTCCACCTTGTGCT 19646154 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || |||||| || | Sbjct 19646171 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCCTCA 19646230 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 19646231 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 19646289 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 19646290 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAA 19646349 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| |||||| | || || ||| | ||||| Sbjct 19646350 CATCCAGAAGGAATCCACCCTCCATCTTGTGCT 19646382 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || |||||| || | Sbjct 19646399 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACACTTGAGGTCGAGTCCTCG 19646458 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 19646459 GACACGATTGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 19646517 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || || | ||||| || |||||||| Sbjct 19646518 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACACTGGCTGACTACAA 19646577 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| || |||||| | || || || ||||||| Sbjct 19646578 CATACAGAAGGAATCCACCCTCCACCTGGTGCT 19646610 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| || | Sbjct 19646627 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCG 19646686 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 19646687 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCA 19646745 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| ||||| || || | ||| ||||| || ||||| Sbjct 19646746 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGGCGGACCCTTGCGGATTACAA 19646805 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || ||||||||||| || Sbjct 19646806 CATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCG 19646841 >seq5 Length=20131956 Score = 140 bits (154), Expect = 3e-28 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || |||||||| | || || ||| || Sbjct 2691775 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 2691834 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | |||| | | | |||| | || | || |||| ||||| ||||| || ||||||| Sbjct 2691835 TCGGACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCGG 2691892 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 2691893 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 2691952 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| |||| || || ||||||| || | | |||||| Sbjct 2691953 ACAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGGC 2692005 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || ||||| ||||| || || ||| |||| || ||| | | Sbjct 16284234 AATGCAAATTTTCGTCAAGACTCTCACCGGCAAGACTATTACCCTCGAGGTTGAGAGCTC 16284293 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | ||| |||| ||||| ||||| |||||| | || | Sbjct 16284294 AGACACCATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGATC 16284352 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | ||||| | ||| ||||| |||||||| || | |||||||| ||||||| Sbjct 16284353 AGCAGAGACTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACA 16284412 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | || || || | ||||| || ||||| || ||| Sbjct 16284413 ACATCCAGAAGGAGTCTACCCTCCACCTAGTGCTCCGCTTGAGGGGTGGC 16284462 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||| || | || || ||| | || Sbjct 16284463 ATGCAGATCTTTGTCAAGACTCTCACAGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 16284522 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || || | ||||| Sbjct 16284523 GACACCATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 16284581 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||| || | ||| ||||| ||||||||||| | |||||||| ||||||||| Sbjct 16284582 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGACGATGGCCGCACCCTTGCCGACTACAA 16284641 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || || ||||||| || Sbjct 16284642 TATTCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 16284677 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || ||||||||| | || || ||| || || Sbjct 16284007 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTTGAGGTGGAGTCCTCC 16284066 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | |||| | ||| |||| ||||| ||||| |||||| | ||||| Sbjct 16284067 GATACCATTGACAATGTTAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 16284126 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||||||||| || |||| | ||||| ||||||||| Sbjct 16284127 CAGCGTCTGATCTTTGCCGGCAAACAGCTCGAGGACGGCAGGACCCTAGCTGACTACAAC 16284186 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 16284187 ATCCAGAAGGA 16284197 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||| ||| | || || ||| || || Sbjct 16283779 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCC 16283838 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 16283839 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCA 16283897 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | ||| ||||| ||||| || || | | ||||| |||||||| Sbjct 16283898 GCAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTGGCTGACTACAA 16283957 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || ||||| | || || || ||||||| || Sbjct 16283958 CATTCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 16283993 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/106 (79%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| || || ||||||||||| | ||| || || |||||||| |||| ||||||| Sbjct 14453109 TCCCGCCTGAGCAGCAGCGGCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCC 14453050 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 | ||||||| |||||| ||||| ||||||| || ||||||| Sbjct 14453049 TGGCCGACTACGGCATCCAGAAGGAGTCGACGCTTCACCTGGTGCT 14453004 >seq1 Length=33916305 Score = 140 bits (154), Expect = 3e-28 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || |||||||| | || || ||| || Sbjct 9799479 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 9799420 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | |||| | | | |||| | || | || |||| ||||| ||||| || ||||||| Sbjct 9799419 TCGGACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGGAT-CCCGCCGG 9799362 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 9799361 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 9799302 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| |||| || || ||||||| || | | |||||| Sbjct 9799301 ACAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGGC 9799249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| |||| ||| || || || || |||| |||||| | | || |||||| | Sbjct 19118789 AAAATGCAGATAT-CGTGAAGACCCTGACTGGCAGGACCATCGCGCTTGAGGTCGAGAAC 19118847 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | | | | ||||| | ||||| ||||| ||||| | || | ||| Sbjct 19118848 TGCGACTCCATCGAGAATATAAAAGAGAGAATCCACGACAGGGAGGGCGTCCCGTCGGAC 19118907 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||||||||| | ||| ||| |||||||| |||| ||||| || |||||| Sbjct 19118908 CAGCAGCGGCTCATCTTCGCCGGCGGCCAGCTGGAGGACGGCCGCACACTGGCTGACTAC 19118967 Query 38421 AACATCCAAAAGGAAGCGACGCTG 38444 ||||||| || || |||||||| Sbjct 19118968 AACATCCGGAACGAGTCGACGCTG 19118991 >seq2 Length=27082872 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || || || ||||| || |||||| |||| || ||| | | Sbjct 2373976 ATGCAGATCTTCGTAAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCT 2373917 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | || || Sbjct 2373916 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 2373858 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| || | | ||||| |||||||| Sbjct 2373857 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTGGCTGACTACAA 2373798 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| |||| || || Sbjct 2373797 CATCCAGAAGGAGTCGACCCTTCA 2373774 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| |||| || || | | Sbjct 2373748 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTGGAATCTTCT 2373689 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 2373688 GACACCATTGACAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 2373630 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| ||||| || || | | ||||| |||||||| Sbjct 2373629 GCAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTTGCTGACTACAA 2373570 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| |||||| |||| || || | || || ||| | || || ||| Sbjct 2373569 CATCCAGAAGGAATCGACCCTCCACCTTGTCCTCCGTCTCAGGGGAGGC 2373521 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || |||||||| | || || ||| | | Sbjct 2373064 ATGCAGATCTTTGTGAAGACATTGACTGGGAAGACCATCACTTTGGAAGTTGAGAGCTCG 2373005 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 2373004 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 2372945 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | || |||||| |||||||||| Sbjct 2372944 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCGCCGACTACAAC 2372885 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || ||||||| ||| Sbjct 2372884 ATCCAGAAGGAGTCTACCCTTCACCTGGTGCTCCGT 2372849 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || |||||| |||| || ||| | | Sbjct 2374204 ATGCAGATCTTTGTGAAGACACTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCT 2374145 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | || || Sbjct 2374144 GACACCATCGATAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 2374086 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| |||||||| |||| | ||||| |||||||| Sbjct 2374085 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTTGCGGACTACAA 2374026 Query 38423 CATCCAAAAGGA 38434 |||||||||||| Sbjct 2374025 CATCCAAAAGGA 2374014 >seq7 Length=18603524 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/145 (75%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 38344 AGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 ||||| |||||||| |||| |||||||| || | ||| || || |||||||| || | | Sbjct 9833390 AGGGA--TCCCGCCGGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGAGGAAGGG 9833333 Query 38403 CGCACCCTCAAC-GACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGC----TGC 38457 || || || | |||||||||||||| ||||| |||||||||| |||||| | | Sbjct 9833332 CGGACGCTGGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTAGTTCC 9833273 Query 38458 GTTTGAGAGGCGGCCGCCGCACGCA 38482 | | | |||||| ||||| |||| Sbjct 9833272 GCATCCGCGGCGGCGGCCGCCCGCA 9833248 >seq9 Length=14105664 Score = 82.4 bits (90), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || |||||||| |||| ||||||||| ||||||||||||||| ||||| |||||||| Sbjct 10475259 AAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCGACGCTG 10475318 Query 38445 CATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474 || ||||||| || | | |||||| || Sbjct 10475319 CACCTGGTGCTCCGCCTCCGCGGCGGCAGC 10475348 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/97 (79%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||||| |||| ||||| ||||| | ||| ||||| |||||||| || | ||||||| Sbjct 13888601 TCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCC 13888660 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 | |||||||||||||| ||||| | ||||| || Sbjct 13888661 TTGCTGACTACAACATCCAGAAGGAGTCCACGCTCCA 13888697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500157225869440