Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=29620734 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 126591 CGTATACCAGAAATTGGAGACAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 126649 || |||||| |||||||||| || ||| || | || |||| | | ||||||||| ||| Sbjct 20104681 CGCATACCACAAATTGGAGATAAGTTTAGTAGTAGGCATGGTC-AGAAAGGAACTGTTGG 20104739 Query 126650 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTAT 126709 |||| |||| |||| || || ||||||| || ||| || || || |||||||| Sbjct 20104740 AATGACTTATACACAGGAGGACATGCCGTGGACTATTGAAGGCATCACACCTGATATTAT 20104799 Query 126710 AATTAATCCAAATTGTATACCGTCAAGAATGACCATAAATCAAATAATTGCAACTGTTAT 126769 | |||||| || ||| ||||| | ||||| || ||| | |||| | |||| Sbjct 20104800 TGTGAATCCACATGCTATTCCGTCCCGTATGACTATTGGTCAGCTGATTGAGTGTATTAT 20104859 Query 126770 GGGTAAA 126776 ||||||| Sbjct 20104860 GGGTAAA 20104866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658382698970360