Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq8 118 1e-21 >seq8 Length=18224760 Score = 118 bits (130), Expect = 1e-21 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 163327 ATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAA 163386 ||||| |||||||| ||||| ||||| |||||||||| || ||| | | | || | Sbjct 4907498 ATGGCTTTCAACCTAAACGGATTCAATTTCAACCAATTTGTAGTTAGCCAAAG--GTCAT 4907441 Query 163387 GTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCAC 163446 || || ||||||||| |||||| | ||| || ||||||| |||||| |||||| Sbjct 4907440 GTTATAAATACTTGGGCTGATATCATCAACCATGCTAATCTTGGTACGGAAGTAATGCAC 4907381 Query 163447 GAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 || |||||||||||||||||||| || ||||| ||| || Sbjct 4907380 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACT 4907342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553067578322040