Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 2e-13 >seq8 Length=18224760 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 163719 CATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG-GGTC 163777 |||||| |||||||| ||||| ||||| |||||||| | | | | | | || |||| Sbjct 4907499 CATGGCTTTCAACCTAAACGGATTCAATTTCAACCAAT---TTGTAGTTAGCCAAAGGTC 4907443 Query 163778 GTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGC 163837 ||| | || |||||||| || | | |||| ||| ||| |||| |||||| |||| Sbjct 4907442 ATGTTATAAATACTTGGGCTGATATCATCAACCATGCTAATCTTGGTACGGAAGTAATGC 4907383 Query 163838 ATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCT 163878 | || ||||| || ||||||||||| || || || ||| || Sbjct 4907382 ACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACT 4907342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563192063061080