Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq1826 82.4 6e-11 >seq1826 Length=266 Score = 82.4 bits (90), Expect = 6e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 118158 GATTTAACATTCTGGTAACATATGTTAATTTTTTGGTATCTTGCTGATTTATAAGGAGTT 118217 |||||||||| || ||||||||||||| || |||||||||| |||||||||| |||| Sbjct 215 GATTTAACATCTTGATAACATATGTTAAGATTCTGGTATCTTGATGATTTATAACAAGTT 156 Query 118218 TTTATTTTGCAAGGAAAA 118235 ||||||| ||| |||| Sbjct 155 TTTATTTGTCAATCAAAA 138 Score = 82.4 bits (90), Expect = 6e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 5363 GATTTAACATTCTGGTAACATATGTTAATTTTTTGGTATCTTGCTGATTTATAAGGAGTT 5422 |||||||||| || ||||||||||||| || |||||||||| |||||||||| |||| Sbjct 215 GATTTAACATCTTGATAACATATGTTAAGATTCTGGTATCTTGATGATTTATAACAAGTT 156 Query 5423 TTTATTTTGCAAGGAAAA 5440 ||||||| ||| |||| Sbjct 155 TTTATTTGTCAATCAAAA 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392490483995107