Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 2e-14 >seq6 Length=21794218 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 192340 GTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCA 192399 |||| ||| || |||||||||||| || | || |||| || | ||||| || Sbjct 19269444 GTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCGGCCATCCTCAAGCTGTTTCCCG 19269503 Query 192400 GCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 192459 |||||||| || | ||| | ||| ||||| || || || || || || ||||| || Sbjct 19269504 GCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTG 19269563 Query 192460 ACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 192519 |||||| |||| |||||| || || || || || || |||||||| || || | || Sbjct 19269564 ACATTATCAATAGTATCTGAGGACTCAACCTCAAGGGTGATGGTTTTCCCGGTGAGAGTC 19269623 Query 192520 TTAATAAATATCTGCAT 192536 || | ||| |||||||| Sbjct 19269624 TTCACAAAGATCTGCAT 19269640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984448579397850