Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 161 6e-35 seq5 149 4e-31 seq4 129 4e-25 seq1 125 5e-24 seq2 122 6e-23 seq9 98.7 6e-16 seq3 96.9 2e-15 >seq6 Length=21794218 Score = 161 bits (178), Expect = 6e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | |||||| |||||||||| |||| ||||||||| ||||| ||||| | Sbjct 19645941 CCTCCCCTGAGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 19645882 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || |||||||| || || ||||||||| | || Sbjct 19645881 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 19645822 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || ||||||| | || | || || ||| || Sbjct 19645821 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACC 19645762 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| |||||||| || ||||| ||||| ||||| |||||||| Sbjct 19645761 TCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCAT 19645715 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | ||| || || || || | |||| |||||||| ||||| ||||| | Sbjct 19646397 CCTCCCCTGAGCCTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 19646338 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || |||||||| || || |||||||| | || Sbjct 19646337 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 19646278 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | |||| || || |||||| Sbjct 19646277 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACC 19646218 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || ||||||||||| || |||||||| || |||||||||||| Sbjct 19646217 TCAAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCATG 19646170 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||| | ||| || |||||||| | |||| |||||||| ||||| ||||| | Sbjct 19646625 CCACCCCTGAGCCTGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCC 19646566 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| ||||| ||||| || || |||||||| | || Sbjct 19646565 AGTGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGG 19646506 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | |||| || || |||||| Sbjct 19646505 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACC 19646446 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || |||||||| || || |||||||| || |||||||||||| Sbjct 19646445 TCAAGTGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 19646398 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | ||| || || ||||| | ||| |||||||| ||||| ||||| | Sbjct 19646169 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCC 19646110 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || |||||||| || || |||||||| | || Sbjct 19646109 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 19646050 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | |||| || || |||||| Sbjct 19646049 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACC 19645990 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||| || || ||||| || || ||||||||||| Sbjct 19645989 TCAAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| ||||| || |||| ||| | ||| |||| Sbjct 19646838 AGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCGCCCATCC 19646779 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| |||||||| || |||||||| | || | ||||||||||| Sbjct 19646778 TCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 19646719 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || || ||| || || | ||| |||||| Sbjct 19646718 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAAGGTGATGGTC 19646659 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| |||||||||||||| Sbjct 19646658 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| || ||||| || || ||| ||| |||| Sbjct 19269429 AGCACGAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCGGCCATCC 19269488 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||| ||||||| || |||| || | || | ||||||||||| Sbjct 19269489 TCAAGCTGTTTCCCGGCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTCCTTGTCC 19269548 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||| ||||| || |||| || || || ||| || |||| ||| || Sbjct 19269549 TGGATTTTGGCCTTGAC--AT--TATCAATAGTATCTGAGGACTCAACCTCAAGGGTGAT 19269604 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || ||||| ||||| |||||||||||||| Sbjct 19269605 GGTTTTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 19269640 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 34744 ATCAT--TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTA 34801 ||||| |||| ||||| | ||||||||||| || | || ||||||||||||||| Sbjct 18102186 ATCATAGTTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCCTTCTGAATGTTG 18102127 Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861 || || | || |||| |||| ||||||||||| || || || ||||| | |||||| Sbjct 18102126 TAATCAGCTAATGTGCGTCCATCTTCCAGTTGCTTCCCTGCAAAAATCAGCCTTTGCTGA 18102067 Query 34862 TCTTGCGGCACCCCCTCCTTGTC 34884 ||| | || | ||||| ||||| Sbjct 18102066 TCTGGGGGAATACCCTCTTTGTC 18102044 >seq5 Length=20131956 Score = 149 bits (164), Expect = 4e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 16283990 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCCAGGGTCCTGCCATCC 16283931 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || |||||||||||| | || | |||||||||||| Sbjct 16283930 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 16283871 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || |||| |||||||||| Sbjct 16283870 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTTATGGTC 16283811 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| |||||||||||||| Sbjct 16283810 TTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 16283779 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| |||||||||||| || ||||| | ||| |||| ||||| Sbjct 16284674 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCG 16284615 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||||||||| || |||||||| | || | || |||||||| Sbjct 16284614 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 16284555 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | ||| || || | || |||||| Sbjct 16284554 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 16284495 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| ||||||||||||||| Sbjct 16284494 TTGCCTGTGAGAGTCTTGACAAAGATCTGCATG 16284462 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | | ||||| ||||||| |||| ||||||||| ||||| ||||| | Sbjct 16284235 TTCCTCCCCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 16284176 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | | | || || || || || ||||| |||||||| || |||||||| | | Sbjct 16284175 CTAGGGTCCTGCCGTCCTCGAGCTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGG 16284116 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||||||||| | || ||| || || | || | || || ||| | Sbjct 16284115 GAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATTGTCAATGGTATCGGAGGACTCCA 16284056 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| ||| ||||||||||| || | |||||| |||||||| |||||| Sbjct 16284055 CCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCATG 16284006 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 2691989 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 2691930 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| |||| | ||||||||||| Sbjct 2691929 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 2691870 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || ||| || || | || |||||| Sbjct 2691869 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 2691810 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 2691809 TTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 2691778 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||| | || || ||||| | ||| ||||||||| ||||| ||||| | Sbjct 16284461 CCACCCCTCAAGCGGAGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCA 16284402 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || |||||||| |||| ||||| ||| | || Sbjct 16284401 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGA 16284342 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || ||| || ||| | || | || | ||| || Sbjct 16284341 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACC 16284282 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || ||||| || ||||| ||||| || || || ||||| Sbjct 16284281 TCGAGGGTAATAGTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 16284235 >seq4 Length=21479432 Score = 129 bits (142), Expect = 4e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | ||| ||||||||| ||||||||||| | ||| |||| |||| Sbjct 18579290 CAGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATC 18579231 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| ||||||||||| || || |||||||| | || | || |||||||| Sbjct 18579230 CTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC 18579171 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | || | || | |||||| || | ||| ||||| Sbjct 18579170 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGT 18579111 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||||||||| || |||||||||||| Sbjct 18579110 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCATG 18579077 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||||||||| | ||| |||| |||| Sbjct 18578622 AGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCC 18578563 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || ||||||||| | || | ||||||||||| Sbjct 18578562 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 18578503 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || |||| | || | |||||| || | ||| || ||| Sbjct 18578502 TGGATCTTGGCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTC 18578443 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 18578442 TTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 18578410 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||||||||| | ||| |||| |||| Sbjct 18578850 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCC 18578791 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | || |||||||| Sbjct 18578790 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 18578731 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | |||||| || | ||| |||||| Sbjct 18578730 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTC 18578671 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || ||||| |||||| Sbjct 18578670 TTGCCAGTGAGGGTCTTCACGAAGATTTGCATG 18578638 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| |||||||| ||||||||||| | || | ||| |||| Sbjct 18578394 AGGACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCC 18578335 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| || || || ||||||||| | || | ||||||||||| Sbjct 18578334 TCAAGCTGCTTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCC 18578275 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | |||| || || |||||| || | ||| |||||| Sbjct 18578274 TGGATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTC 18578215 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || |||||||| Sbjct 18578214 TTGCCAGTGAGGGTCTTAACGAATATCTGCAT 18578183 Score = 114 bits (126), Expect = 8e-21 Identities = 151/212 (71%), Gaps = 17/212 (8%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||||||||| | ||| |||| |||| Sbjct 18579061 AGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCC 18579002 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | || |||||||| Sbjct 18579001 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 18578942 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | | | || | || ||| || ||| || || | ||| |||||| Sbjct 18578941 TGGA-----TCTTGGCCG------------TCAGAGGACTCAACCTCCAGGGTGATGGTC 18578899 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 18578898 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18578867 >seq1 Length=33916305 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 9799265 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 9799324 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| |||| | |||||||||||| Sbjct 9799325 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 9799384 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || ||| || || | || |||||| Sbjct 9799385 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 9799444 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 9799445 TTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9799476 >seq2 Length=27082872 Score = 122 bits (134), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||||||||| ||||| ||||| | ||| | || |||| Sbjct 2372853 AGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCATCC 2372912 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||||||||| || ||||||||| | || | |||||||||||| Sbjct 2372913 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 2372972 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || |||| || || | ||| || || | || || Sbjct 2372973 TGGATCTTGGCCTTCAC--AT--TATCAATGGTGTCCGAGCTCTCAACTTCCAAAGTGAT 2373028 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || | ||||| |||||||||||||| Sbjct 2373029 GGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| ||||| | ||| | | |||| Sbjct 2373765 AGAACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCC 2373824 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 2373825 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 2373884 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | ||| || || | ||| || ||| Sbjct 2373885 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTC 2373944 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || |||||||| |||||||||||| Sbjct 2373945 TTGCCAGTCAGAGTCTTTACGAAGATCTGCATG 2373977 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||||||||| | ||| | | |||| Sbjct 2373309 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373368 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || |||||||| | || | || |||||||| Sbjct 2373369 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373428 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | ||| || |||| ||| || Sbjct 2373429 TGGATCTTGGCCTTGAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGAT 2373484 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || || ||||| || |||||||||||| Sbjct 2373485 AGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 2373521 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||| | | ||||| ||||| | ||| |||||||| ||||| ||||| | Sbjct 2373522 CCTCCCCTGAGACGGAGGACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCA 2373581 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| || || ||||| || || ||||| || || |||||||| | || Sbjct 2373582 AGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGAGGG 2373641 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | ||| | || || Sbjct 2373642 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGATTCCACC 2373701 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| ||||| || ||||| || |||||||||||| Sbjct 2373702 TCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCATG 2373749 Score = 104 bits (114), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||| || ||||| ||||||| ||| | | | || Sbjct 2373993 AGGACAAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCC 2374052 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||| || || ||||| || | || | ||||||||||| Sbjct 2374053 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 2374112 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| | ||||||| ||| | ||| || || | ||| || Sbjct 2374113 TGGATCTTAGCCTTGAC----GTTATCGATGGTGTCAGACGACTCCACCTCGAGGGTGAT 2374168 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || ||||| |||||||||||||| Sbjct 2374169 AGTCTTGCCGGTCAGTGTCTTCACAAAGATCTGCAT 2374204 >seq9 Length=14105664 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||| | ||| ||||||| ||||| || ||||||||||||||| ||||| | Sbjct 7866251 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGCC 7866192 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 7866191 AGTGTGCGTCCATCCTCCAACTGCTTGCCAGCGAATATCAAACGCTGCTGATCTGGAGGG 7866132 Query 34871 ACCCCCTCCTTGTC 34884 | |||||||||||| Sbjct 7866131 ATCCCCTCCTTGTC 7866118 Score = 89.7 bits (98), Expect = 3e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| |||| Sbjct 13888706 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 13888647 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||||| ||||| ||||||||||| || || |||||||| |||| Sbjct 13888646 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 13888603 >seq3 Length=29620734 Score = 96.9 bits (106), Expect = 2e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | Sbjct 6260169 CCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACC 6260228 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 6260229 ATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 6260276 Score = 96.9 bits (106), Expect = 2e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | Sbjct 6271930 CCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACC 6271989 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 6271990 ATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 6272037 Score = 93.3 bits (102), Expect = 3e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| |||| Sbjct 6260749 AGGACGAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCAGCCAGGGTGCGTCCATCC 6260808 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 6260809 TCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 6260852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325682912271929