Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 1e-11 >seq7 Length=18603524 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/167 (73%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 305324 GATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAA 305383 |||| |||||| |||||| ||||||| || |||||||||||| | |||| ||| Sbjct 8647467 GATTTGGTTCTTTTCAATCGGCAACCCAGTCTTCATAAAATGTCTTTCATGGGACATCGC 8647526 Query 305384 GTCAAAGTATTAT-CTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATA 305441 | || || || | ||| || || || ||||| || ||| | |||| || | Sbjct 8647527 ATTAA--GATCATGCCCTATTCAACTTTCCGCTTAAACTTATCTGCCACTTCGCCGTACA 8647584 Query 305442 ATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 |||| || |||||||| |||||||||||||||||||| ||||| ||| Sbjct 8647585 ATGCAGA-TTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCA 8647630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186774921756851