Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq8 100 8e-17 >seq8 Length=18224760 Score = 100 bits (110), Expect = 8e-17 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 19551 CATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCG 19610 |||||| |||||| | || || || || || ||||| | | || | ||| |||| Sbjct 4907499 CATGGCTTTCAACCTAAACGGATTCAATTTCAACCAATTTGTAGTTAGC--CAAAGGTCA 4907442 Query 19611 TGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCA 19670 ||| || ||||||||||||| || |||| | |||||| || || || |||||||| Sbjct 4907441 TGTTATAAATACTTGGGCTGATATCATCAACCATGCTAATCTTGGTACGGAAGTAATGCA 4907382 Query 19671 CGAACGTAATGCTCATAACTTCCCACTTGATTTGGCTAC 19709 ||||||||||||||| |||||||| || || | ||||| Sbjct 4907381 CGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTAC 4907343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141144624730278