Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6 134 1e-26 seq5 129 5e-25 seq1 125 6e-24 seq2 118 1e-21 seq4 102 7e-17 seq9 82.4 7e-11 >seq6 Length=21794218 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||| | || |||||| || ||||||||||| || Sbjct 19646853 CCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCA 19646794 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| | || || |||||||| || ||||| |||| ||||||||||||| ||| Sbjct 19646793 AGGGTCCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGA 19646734 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| |||||| ||||| |||| | | |||||| || || || Sbjct 19646733 ATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGAGGACTCAAC 19646675 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| ||||| || || || || | || || ||||| |||||||| Sbjct 19646674 CTCCAAGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || |||| ||| || | || || |||||||| || || || Sbjct 19646133 TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 19646074 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| ||| | || |||||||||| |||||| ||||| ||| Sbjct 19646073 ATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646015 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| || || ||||| | |||||| || || || |||| ||||| || Sbjct 19646014 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTTTTGAC 19645955 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 19645954 GAAGATCTGCAT 19645943 Score = 109 bits (120), Expect = 5e-19 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 ||||| ||||| || | || |||||| || |||||||| || |||| ||| || | Sbjct 19645930 CCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCC 19645871 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || || |||||||| || || || || | ||||||||||| | |||| || |||||| Sbjct 19645870 ATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTT 19645811 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 |||| |||| || |||| |||| | | || || || |||||||| | |||| Sbjct 19645810 GTCCTGGATC-TTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGA 19645752 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGCACA 35748 | || || || || | || |||||||| ||||||| |||| |||||| Sbjct 19645751 TGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCA-TCTGCACGCACA 19645704 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || |||| ||| || | || || |||||||| || || || Sbjct 19646361 TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 19646302 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| ||| | || |||||||||| |||||| ||||| ||| Sbjct 19646301 ATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646243 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| || || ||||| | ||||| || || || |||| || || || Sbjct 19646242 GTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAGGGTCTTGAC 19646183 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 19646182 GAAGATCTGCAT 19646171 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || |||| || || | || || |||||||| || ||||| Sbjct 19646589 TCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 19646530 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||||| ||| Sbjct 19646529 ATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 19646471 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| || || ||||| | ||||| || || || || | || || || Sbjct 19646470 GTCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTAAGGGTCTTGAC 19646411 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 19646410 GAAGATCTGCAT 19646399 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 35505 TATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAAT 35564 || ||||||| | | ||||| |||||||| | ||| |||||| ||||||||||||| Sbjct 18102182 TAGTTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCCTTCTGAATGTTGTAAT 18102123 Query 35565 CGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCG 35624 | || || || || | || ||||| ||||| || ||||| |||| || ||||| || | Sbjct 18102122 CAGCTAATGTGCGTCCATCTTCCAGTTGCTTCCCTGCAAAAATCAGCCTTTGCTGATCTG 18102063 Query 35625 AAGGAACGCTCTCCTTGTCC 35644 |||| | ||| |||||| Sbjct 18102062 GGGGAATACCCTCTTTGTCC 18102043 >seq5 Length=20131956 Score = 129 bits (142), Expect = 5e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 2691969 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2691910 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||||| || Sbjct 2691909 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 2691851 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 2691850 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 2691791 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2691790 CGAAGATCTGCAT 2691778 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| ||||| ||||| | ||| || | |||||||||||||| || || || Sbjct 16284654 CTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCGTCCAGCTGCTTGCCGGCGAA 16284595 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||||||| | ||| | || ||||||||| |||||| ||||| || Sbjct 16284594 GATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 16284536 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || ||||||| || || || || || || | ||| | Sbjct 16284535 TGTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCTGTGAGAGTCT 16284479 Query 35721 TCACAAATATCTGCAT 35736 | ||||| |||||||| Sbjct 16284478 TGACAAAGATCTGCAT 16284463 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | |||| || ||||| || || ||||| Sbjct 16284198 CTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCCTCGAGCTGTTTGCCGGCAAA 16284139 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| ||||||| ||| | | | Sbjct 16284138 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATT 16284079 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||| || |||||||| | ||||| || || || ||||| || || || Sbjct 16284078 GTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTGAC 16284019 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 16284018 AAAGATTTGCAT 16284007 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || |||| ||| | | || || |||||||| || || || Sbjct 16283970 CTCCTTCTGAATGTTGTAGTCAGCCAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCGAA 16283911 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | | |||||||||| |||||| ||| | || Sbjct 16283910 GATGAGACGTTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 16283852 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | || || || || || || | || |||| Sbjct 16283851 TGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCA 16283792 Query 35724 CAAATATCTGCATTCTGT 35741 |||| ||||||| ||||| Sbjct 16283791 CAAAGATCTGCA-TCTGT 16283775 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| || | || ||||||||||| || || || Sbjct 16284426 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 16284367 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | | |||||| || | |||| || |||||||||| ||||||| ||||| || Sbjct 16284366 GATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGT 16284308 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || ||||| | || || || || || || | ||| | Sbjct 16284307 TGTCGATGGTGTCTGAGCTC---TCAACCTCGAGGGTAATAGTCTTGCCGGTGAGAGTCT 16284251 Query 35721 TCACAAATATCTGCATTC 35738 | || || || ||||||| Sbjct 16284250 TGACGAAAATTTGCATTC 16284233 >seq1 Length=33916305 Score = 125 bits (138), Expect = 6e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 9799285 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 9799344 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||||| || Sbjct 9799345 GATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 9799403 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 9799404 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 9799463 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 9799464 CGAAGATCTGCAT 9799476 >seq2 Length=27082872 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| ||||| Sbjct 2372838 CCACCACGGAGACGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2372897 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || || || |||| ||||||||||| | || Sbjct 2372898 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 2372957 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||||||| |||||| ||||| | | | | ||||| |||| || Sbjct 2372958 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTC---TCA 2373014 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || || ||||| || |||||||| |||||||| Sbjct 2373015 ACTTCCAAAGTGATGGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || || | ||| | |||| ||||||||||| || ||||| Sbjct 2374013 CTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAA 2374072 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| |||| || | || |||||||||| |||||| ||| | | Sbjct 2374073 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 2374132 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| |||||||| | ||||| || || || |||| || ||||| Sbjct 2374133 ATCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTCTTCAC 2374192 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2374193 AAAGATCTGCAT 2374204 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || || | ||| | | || || |||||||| || ||||| Sbjct 2373558 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 2373617 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| ||| | || |||||||||| |||||| ||| | ||| Sbjct 2373618 ATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 2373676 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| ||||||||||| | ||||| || || ||||||| ||| || || Sbjct 2373677 GTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGAC 2373736 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2373737 GAAGATCTGCAT 2373748 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| | | || ||||||||||| || || || Sbjct 2373785 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 2373844 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| |||| || | || |||||||||| |||||| ||| | || Sbjct 2373845 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2373903 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || || |||| ||| || | Sbjct 2373904 TGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTTA 2373963 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2373964 CGAAGATCTGCAT 2373976 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || ||||| || || || Sbjct 2373066 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCA 2373125 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | | || || |||||||| || ||||| || | ||||||||||||| || Sbjct 2373126 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 2373185 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||||||||| |||||| ||||| | | | | || || |||| || Sbjct 2373186 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTC---TCA 2373242 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| |||||||| || || || | || || ||||| |||||||| Sbjct 2373243 ACCTCCAGAGTGATCGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| | | || || |||||||| || ||||| Sbjct 2373329 CTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAA 2373388 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||| | | | Sbjct 2373389 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 2373448 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| || || || |||| ||| || || Sbjct 2373449 GTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGAC 2373508 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2373509 GAAGATCTGCAT 2373520 >seq4 Length=21479432 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||| || || || | || ||| | || || |||||||| || || ||| Sbjct 18578373 TCCTTCTGGATGTTATAGTCTGCAAGTGTACGCCCATCCTCAAGCTGCTTGCCGGCGAAT 18578314 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 18578313 ATAAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTG 18578254 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| ||| || || ||||||| ||||| || || || || | || || || Sbjct 18578253 TCAATCGTATCGGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACG 18578194 Query 35726 AATATCTGCAT 35736 ||||||||||| Sbjct 18578193 AATATCTGCAT 18578183 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||||| | ||| || | || ||||||||||| || || || Sbjct 18579269 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 18579210 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||||| || Sbjct 18579209 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 18579151 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || || || | || |||| Sbjct 18579150 TGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTCA 18579091 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 18579090 CGAAGATCTGCAT 18579078 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| || | || || |||||||| || ||||| Sbjct 18578602 CTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 18578543 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 18578542 GATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 18578483 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| || ||||| | || || || || || || | || ||||| Sbjct 18578482 GTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGTCTTGCCAGTGAGGGTCTTCAC 18578423 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 18578422 GAAGATCTGCAT 18578411 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| || | || || |||||||| || || || Sbjct 18578830 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 18578771 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || ||||||||| |||||| ||||| || Sbjct 18578770 GATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 18578712 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || || || | || |||| Sbjct 18578711 TGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCA 18578652 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 18578651 CGAAGATTTGCAT 18578639 >seq9 Length=14105664 Score = 82.4 bits (90), Expect = 7e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || |||| || || | || |||| |||||| || || || Sbjct 7866216 CTCCTTCTGAATGTTGTAGTCAGCCAGTGTGCGTCCATCCTCCAACTGCTTGCCAGCGAA 7866157 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||| |||||||| || | ||| | | |||||||||| Sbjct 7866156 TATCAAACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCC 7866117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450779563414280