Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 9e-11 >seq3 Length=29620734 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 178394 CATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTT 178453 |||||| ||||| || ||||||||||| ||||| || |||||||| ||||| |||||||| Sbjct 19631295 CATGTTAGGTGTGGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCTTT 19631354 Query 178454 GGTTACATCT 178463 ||| || ||| Sbjct 19631355 GGTAACCTCT 19631364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605990730376080