Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq2451 170 4e-37 >seq2451 Length=202 Score = 170 bits (188), Expect = 4e-37 Identities = 161/203 (79%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 87224 TTGTTTCTCCAGAAGCACTATCTATTATTCAGTCTGCAACTACTTCTAGTTTTGCACGCA 87283 ||||||||||| || ||| ||||| |||||||||||||||||||||||||||| || | Sbjct 1 TTGTTTCTCCAACTGCTCTAACTATTCTTCAGTCTGCAACTACTTCTAGTTTTGCTCGTA 60 Query 87284 GTACTGAAGGTACTTTCGAAGCACCAACCAACGTTAAATTTGCTGGTACTCTAAATGGTA 87343 ||||||||||||||| ||||| ||||| ||||||||||| | |||| ||||| | Sbjct 61 CTACTGAAGGTACTTTTGAAGCTCCAACTAACGTTAAATTCGTTGGTGTACTAAACTCAA 120 Query 87344 CTATGCGTATCTACGTTGATACCTATGCTTCTGATCTGGA-AGATATCCTGATTGGTTAT 87402 | |||||| | || ||||||||||||||| ||| | | | ||| | || || ||||| Sbjct 121 CCATGCGTGTATATGTTGATACCTATGCTGATGA-CAGTACTGATGTACTAATCGGTTAC 179 Query 87403 AAAGGTGCTAACGAAACTGACGC 87425 |||||| | | |||||||| || Sbjct 180 AAAGGTAATCAAGAAACTGATGC 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108959805378509