Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2 158 3e-33 seq6 154 4e-32 seq5 145 2e-29 seq1 145 2e-29 seq4 143 6e-29 seq3 98.7 2e-15 >seq2 Length=27082872 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || ||||| || |||| ||||| || || | || || ||||| Sbjct 2373537 AGGACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCC 2373596 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| |||||||| || || ||||| || || || || |||||||| Sbjct 2373597 TCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 2373656 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | |||||| || | ||||| ||| Sbjct 2373657 TGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTC 2373716 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| ||| || | ||| | ||||| Sbjct 2373717 TTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 2373748 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| || || || || | || || ||||| Sbjct 2373309 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373368 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 2373369 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373428 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| || | ||||| || | ||||| ||| Sbjct 2373429 TGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 2373488 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 2373489 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || |||| ||||| || |||| || || ||||| Sbjct 2373765 AGAACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCATCC 2373824 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || || || || || |||||||| Sbjct 2373825 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 2373884 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | ||||| || | ||||| ||| Sbjct 2373885 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTC 2373944 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| |||| ||| | ||||| Sbjct 2373945 TTGCCAGTCAGAGTCTTTACGAAGATCTGCAT 2373976 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| || || || || | || || ||||| Sbjct 2373081 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373140 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 2373141 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373200 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| |||||| | || || || | ||||||||| Sbjct 2373201 TGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTCTCAACCTCCAGAGTGATCGTC 2373260 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 2373261 TTGCCTGT 2373268 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || ||||||| ||||| || || | || || || || Sbjct 2373993 AGGACAAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCTGCCGTCC 2374052 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || || || || || || || |||||||| Sbjct 2374053 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCC 2374112 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 2374113 TGGATCTTAGCCTTGACGTTATCGATGGTGTCAGACGACTCCACCTCGAGGGTGATAGTC 2374172 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 2374173 TTGCCGGTCA 2374182 >seq6 Length=21794218 Score = 154 bits (170), Expect = 4e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| || ||||| || |||| ||||| || |||| || | Sbjct 19646160 AGCCTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19646101 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 19646100 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCC 19646041 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| |||||| ||||| ||||| |||| || || || | |||| Sbjct 19646040 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 19645981 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| |||| ||||| | ||| | ||||| Sbjct 19645980 ATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||| ||||| |||||||| || |||| ||||| || |||| || | Sbjct 19646388 AGCCTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19646329 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 19646328 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCC 19646269 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| |||||| ||||| |||||||||| || || || | ||| Sbjct 19646268 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTG 19646209 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || |||| || || | ||| | ||||| Sbjct 19646208 ATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 19646171 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || ||||| || ||||| || ||||| || || |||| ||||| || |||| || | Sbjct 19645932 AGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 19645873 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || ||||| || ||| Sbjct 19645872 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 19645813 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| || || || ||||| || |||| ||||| || | ||| Sbjct 19645812 TTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTG 19645753 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 19645752 ATGGTCTTGCCGGT 19645739 >seq5 Length=20131956 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||||| | || | || || Sbjct 2691989 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 2691930 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 2691929 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 2691870 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 2691869 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 2691810 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 2691809 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 2691775 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| || || | || | ||||| Sbjct 16284446 AGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 16284387 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| |||| || || || || ||||| || |||||||| Sbjct 16284386 TCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 16284327 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| |||||| ||||||||||||||| | || || || | || || ||| Sbjct 16284326 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATAGTC 16284267 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | ||| | ||||||| Sbjct 16284266 TTGCCGGTGAGAGTCTTGACGAAAATTTGCATT 16284234 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || |||| ||||| || || | || || || || Sbjct 16284218 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCC 16284159 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| || || || ||||| || ||||| || |||||||| Sbjct 16284158 TCGAGCTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16284099 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| || ||||| || |||| ||||| || | ||||| ||| Sbjct 16284098 TGGATCTTTGCCTTAACATTGTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTC 16284039 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | || | |||||| Sbjct 16284038 TTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 16284007 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || || | |||||| ||||| | || | ||||| Sbjct 16284674 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGGCCATCG 16284615 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || || ||||||||||| Sbjct 16284614 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 16284555 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| ||| | || || || | || || ||| Sbjct 16284554 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 16284495 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 16284494 TTGCCTGTGAGAGTCTT 16284478 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || || | ||||| || |||| || || ||||| Sbjct 16283990 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCCAGGGTCCTGCCATCC 16283931 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || ||||| ||||| || || || || |||||||| Sbjct 16283930 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 16283871 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| |||| || || || | || || ||| Sbjct 16283870 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTTATGGTC 16283811 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 16283810 TTGCCAGT 16283803 >seq1 Length=33916305 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||||| | || | || || Sbjct 9799265 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 9799324 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| ||||| || || |||||||| Sbjct 9799325 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 9799384 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 9799385 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 9799444 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 9799445 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9799479 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 22038872 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 22038813 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 22038812 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 22038753 Query 7855 GTTAGCT 7861 ||||||| Sbjct 22038752 GTTAGCT 22038746 >seq4 Length=21479432 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| || ||||| || || |||| || || || || | || Sbjct 18578860 ACGAAGACGAAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGT 18578801 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 18578800 GCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCC 18578741 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| |||||| ||||||||||| || | || || || || Sbjct 18578740 TTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAA 18578681 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | |||||| Sbjct 18578680 GGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 18578639 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| | |||||||| || |||| || || || || | || Sbjct 18578404 ACGAAGGCGGAGGACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGTGT 18578345 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || |||||||| || ||||| ||||| || || ||||| || || || || Sbjct 18578344 ACGCCCATCCTCAAGCTGCTTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGGGATTCC 18578285 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| || || || || |||| || || || || Sbjct 18578284 CTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCGACCTCCAA 18578225 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 18578224 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 18578183 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| |||||||| || || || || || |||| || || ||||| | || Sbjct 18579299 ACGGAGGCGCAGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCAAGGGT 18579240 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 18579239 GCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCC 18579180 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| |||||| ||||||||||| || | || || || || Sbjct 18579179 TTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAA 18579120 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 18579119 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18579078 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| | ||||| || || |||| || || || || | || Sbjct 18578632 ACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGT 18578573 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||| ||||| || || || ||||| || || || || Sbjct 18578572 GCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCC 18578513 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| || || |||||||| | || || |||| Sbjct 18578512 CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAG 18578453 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | ||||| Sbjct 18578452 GGTAATTGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 18578411 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| | ||||| || || |||| || || || || | || Sbjct 18579071 ACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGT 18579012 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 18579011 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCC 18578952 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||||||||| |||||||| Sbjct 18578951 TTCCTTGTCCTGGATCTT 18578934 >seq3 Length=29620734 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || ||||| |||||||| ||||| || || |||| ||||| || |||| || Sbjct 6271924 ACGGAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 6271983 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||||||||| |||||||| || || || ||||| ||||| || || Sbjct 6271984 GCGACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCC 6272043 Query 225612 TTCC 225615 | || Sbjct 6272044 TGCC 6272047 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || ||||| |||||||| ||||| || || |||| ||||| || |||| || Sbjct 6260163 ACGGAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 6260222 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 | ||||| || ||||||||||| |||||||| || || || ||||| ||||| || Sbjct 6260223 GCGACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGAT 6260279 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || || | ||||| || |||| || | ||||| Sbjct 6260749 AGGACGAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCAGCCAGGGTGCGTCCATCC 6260808 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||||||||| |||||||| || || || ||||| ||||| || ||| || Sbjct 6260809 TCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCTGCC 6260862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192493139248754