Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 134 3e-26 seq2 131 4e-25 seq6 122 2e-22 seq4 118 2e-21 seq1 116 9e-21 seq3 96.9 8e-15 >seq5 Length=20131956 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||| || || || || || ||||| || || || ||||| ||||| | || Sbjct 16284684 CCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGT 16284625 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || ||||||||||| |||| ||||||||| | | ||| || Sbjct 16284624 GCGGCCATCGTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCC 16284565 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| || || || || || || | || | | |||| || ||||| || || || Sbjct 16284564 TTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAG 16284505 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || ||||| ||||||||||| || |||| |||||| Sbjct 16284504 AGTAATGGTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCAT 16284463 Score = 125 bits (138), Expect = 2e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || |||||||| || ||||||||||| || || | || | ||||| Sbjct 16284447 GAGCACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATC 16284388 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || |||||||| || | | || || ||||| || Sbjct 16284387 CTCCAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTC 16284328 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || ||| || || | || | | ||||||| ||||| || || || |||||||| Sbjct 16284327 CTGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCGAGGGTAATAGT 16284268 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||||||||| ||||| | |||||| Sbjct 16284267 CTTGCCGGTGAGAGTCTTGACGAAAATTTGCATT 16284234 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 2691996 GAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 2691937 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||||| || ||| || || Sbjct 2691936 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTC 2691877 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | | |||| || ||| || || || || Sbjct 2691876 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGT 2691817 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||||| |||||| || Sbjct 2691816 GATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 2691775 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||||||||| ||||| || ||||| || ||||||||||| || |||| || Sbjct 16284228 CCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGT 16284169 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 || || || || || ||| ||||| ||||| || | ||||||||||| | || || Sbjct 16284168 CCTGCCGTCCTCGAGCTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCC 16284109 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || ||| || ||| | || | | | || || ||| || ||||| Sbjct 16284108 CTCCTTGTCCTGGATCTTTGCCTTAACATTGTCAATGGTATCGGAGGACTCCACCTCAAG 16284049 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || | ||||| || |||| ||||| Sbjct 16284048 GGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 16284007 >seq2 Length=27082872 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | ||||||||| || || || || || || ||||||||||| || || | || Sbjct 2373527 CCTGAGACGGAGGACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCAAGGGT 2373586 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 || ||||| || || || || || |||||||| | ||||||||||| | ||| || Sbjct 2373587 CCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGGAGGGATGCC 2373646 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || ||||| | || | | |||| ||| || || || || Sbjct 2373647 CTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGATTCCACCTCGAG 2373706 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| |||||||| ||||||| |||||| Sbjct 2373707 GGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 2373748 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| ||||| || ||||| || ||||||||||| || || | || || Sbjct 2373758 GAGGCGGAGAACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCT 2373817 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | |||||| |||| | ||| || || Sbjct 2373818 GCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTC 2373877 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| ||| ||| || || || || Sbjct 2373878 CTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGT 2373937 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || |||||||| ||||||| |||||| Sbjct 2373938 GATAGTCTTGCCAGTCAGAGTCTTTACGAAGATCTGCAT 2373976 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || ||||| |||||||| || ||||||||||| ||||| | || | Sbjct 2372846 GAGACGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACG 2372905 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | ||||||||| | | ||| || || Sbjct 2372906 GCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATCCCCTC 2372965 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | | |||| || ||||| ||||| | ||| Sbjct 2372966 CTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCAACTTCCAAAGT 2373025 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | |||||||| |||| |||||| Sbjct 2373026 GATGGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || |||||||| || || || | || || Sbjct 2373302 GAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCT 2373361 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | ||||||||||| | ||| ||||| Sbjct 2373362 GCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTC 2373421 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | |||| ||| ||| || ||||| || Sbjct 2373422 CTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGT 2373481 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || |||||||| ||||||| |||||| Sbjct 2373482 GATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2373520 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || |||||||| || || || | || || ||||| Sbjct 2373081 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTGCCATCC 2373140 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||||||||| | ||| |||||||| || Sbjct 2373141 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 2373200 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | | ||||| ||||| || || ||||| || || Sbjct 2373201 TGGATCTTGGCCTTCACATTGTCGATGGTATCTGAGCTCTCAACCTCCAGAGTGATCGTC 2373260 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| || |||| |||||| Sbjct 2373261 TTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||||| |||||||||||||| || || | || || Sbjct 2373986 GAGGCGGAGGACAAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGGGTCCT 2374045 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| ||||| || | |||||| |||| | ||| || || Sbjct 2374046 GCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTC 2374105 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || || || || Sbjct 2374106 CTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCAGACGACTCCACCTCGAGGGT 2374165 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || || |||||||| |||| |||||| Sbjct 2374166 GATAGTCTTGCCGGTCAGTGTCTTCACAAAGATCTGCAT 2374204 >seq6 Length=21794218 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| ||||| |||||||| || || || || || ||||||||||| || || | || Sbjct 19646392 CCTGAGCCTGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGT 19646333 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || || |||||||| || | ||||||||||| | ||| || Sbjct 19646332 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCC 19646273 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || || | || | ||||||| ||| || ||||| Sbjct 19646272 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAG 19646213 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || || || || ||||| ||||||| |||||| Sbjct 19646212 AGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 19646171 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| || || || || ||||| || ||||| || ||||||||||| || || | || Sbjct 19645936 CCTGAGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 19645877 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || || |||||||| || | ||||||||| | | || || Sbjct 19645876 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCC 19645817 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || |||||| | || | | | || || ||| || ||||| Sbjct 19645816 CTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAG 19645757 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| |||||||| || | |||||| Sbjct 19645756 GGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAAATCTGCAT 19645715 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| ||||| ||||| || || ||||| || || ||||||||||| || || | || Sbjct 19646164 CCTGAGCCTGAGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAGGGT 19646105 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || || |||||||| || | ||||||||||| | ||| || Sbjct 19646104 GCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCC 19646045 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || || | || | |||| || ||| || ||||| Sbjct 19646044 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAG 19645985 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || || || ||||||| |||||| Sbjct 19645984 CGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 19645943 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| ||||| || || || || || || || || || |||||||| || || | || Sbjct 19646620 CCTGAGCCTGAGCACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCCAGTGT 19646561 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| || || || ||||| ||||| || | ||||||||||| | ||| || Sbjct 19646560 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACC 19646501 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || || || | || | |||| || ||| || ||||| Sbjct 19646500 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAG 19646441 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||| ||||||| |||||| Sbjct 19646440 TGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 19646399 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || |||||||| || ||||| || ||||| | | | Sbjct 19269422 GAGGCGGAGCACGAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCTGAGAGGAGGCG 19269481 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||||||||| ||||| | | ||||| |||| | || || || Sbjct 19269482 GCCATCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGCTGCTCATCCGGTGGAATGCCCTC 19269541 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || ||||| |||||| | || | | ||||| ||| || ||||| || Sbjct 19269542 CTTGTCCTGGATTTTGGCCTTGACATTATCAATAGTATCTGAGGACTCAACCTCAAGGGT 19269601 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || |||||||||||||| |||| |||||| Sbjct 19269602 GATGGTTTTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 19269640 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| || || ||||| || |||||||||||||| || | || | Sbjct 19646845 GAGGCGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCG 19646786 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||| || || || ||||| ||||| || | ||||||||||| | || || || Sbjct 19646785 CCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTC 19646726 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | |||| || ||| || || | || Sbjct 19646725 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAAGGT 19646666 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| || |||| |||||| Sbjct 19646665 GATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 >seq4 Length=21479432 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || | || ||||| || |||||||| || || || | || | ||||| Sbjct 18578623 GAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATC 18578564 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | ||||||||| | | |||||| ||||| || Sbjct 18578563 CTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTC 18578504 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || ||| | |||| ||||||| ||| || || || ||||| || Sbjct 18578503 CTGGATCTTGGCCTTCACATTGTCTATTGTGTCTGACGACTCGACCTCTAGGGTAATTGT 18578444 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 18578443 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 18578411 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || || || ||||| || |||||||| || ||||| | || | ||||| Sbjct 18579289 AGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCC 18579230 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||| |||||||| || Sbjct 18579229 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 18579170 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | |||| || ||| || || | || || || Sbjct 18579169 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTC 18579110 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 18579109 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18579078 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || |||||||| || || || | || | ||||| Sbjct 18578850 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCATCC 18578791 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||| |||||||| || Sbjct 18578790 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 18578731 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | |||| || ||| || || | || || || Sbjct 18578730 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCGACCTCCAAGGTGATGGTC 18578671 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| ||||| Sbjct 18578670 TTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 18578639 >seq1 Length=33916305 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||||| | || | Sbjct 9799258 GAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 9799317 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||||| || ||| || || Sbjct 9799318 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTC 9799377 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | | |||| || ||| || || || || Sbjct 9799378 CTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGT 9799437 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||||| |||||| || Sbjct 9799438 GATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9799479 Score = 87.8 bits (96), Expect = 4e-12 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || ||||| || |||||||||| || || | || | || || || || || | Sbjct 19118990 AGCGTCGACTCGTTCCGGATGTTGTAGTCAGCCAGTGTGCGGCCGTCCTCCAG-CTGGCC 19118932 Query 151965 -CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTG 152023 ||||||||||| |||| ||||||||||| || || || ||| | || || ||| | | Sbjct 19118931 GCCGGCGAAGATGAGCCGCTGCTGGTCCGACGGGACGCCCTCCCTGTCGTGGATTCTCTC 19118872 Query 152024 TTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAG 152083 ||| | | |||| | | ||| | |||| || ||||| | || || |||| || || Sbjct 19118871 TTTTATATTCTCGATGGAGTCGCAGTTCTCGACCTCAAGCGCGATGGTCCTGCCAGTCAG 19118812 Query 152084 AGTCTTCACGAAGACCTGCATTTT 152107 ||||||||| | | ||||||||| Sbjct 19118811 GGTCTTCACG-ATATCTGCATTTT 19118789 >seq3 Length=29620734 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| |||||||| || || || || ||||| || ||||||||||| || || | || | Sbjct 6271927 GAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCG 6271986 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || |||||||||||||| |||| ||||||||||| || ||||||| | Sbjct 6271987 ACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCTGC 6272046 Query 152006 C 152006 | Sbjct 6272047 C 6272047 Score = 91.5 bits (100), Expect = 3e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| |||||||| || || || || ||||| || ||||||||||| || || | || | Sbjct 6260166 GAGCCTGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCG 6260225 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 ||||| || || |||||||||||||| |||| ||||||||||| || |||| Sbjct 6260226 ACCATCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATT 6260280 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||||| || || |||||||| || || | || | ||||| Sbjct 6260748 GAGGACGAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCAGCCAGGGTGCGTCCATC 6260807 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || |||||||||||||| |||| ||||||||||| || ||||||| || Sbjct 6260808 CTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCTGCC 6260862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153783974727461