Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2 178 3e-39 seq4 174 4e-38 seq5 165 2e-35 seq6 159 8e-34 seq1 150 4e-31 seq320 87.8 4e-12 >seq2 Length=27082872 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||||||||||||| || ||| Sbjct 2373745 CAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTGGAATCTTCTGAC 2373686 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||||||||||||||| Sbjct 2373685 ACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 2373626 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| || ||||| ||||| ||||| || || ||| || Sbjct 2373625 CGTCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTTGCTGACTACAACATC 2373566 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 2373565 CAGAAGGAATCGACCCTCCACCTTGT 2373540 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || |||||||| || |||||||| || ||||| || |||||||| Sbjct 2373289 CAGATCTTTGTCAAGACCCTCACAGGCAAGACGATCACTCTGGAGGTTGAGAGCTCAGAT 2373230 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 2373229 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 2373170 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| ||||| ||||| || |||||| || Sbjct 2373169 CGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCTGACTATAACATC 2373110 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 2373109 CAGAAGGAGTCTACCCTCCACCTGGT 2373084 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || ||||||||||||||||| || ||| Sbjct 2374201 CAGATCTTTGTGAAGACACTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGAC 2374142 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 2374141 ACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAG 2374082 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || || || ||||| ||||| || || ||| || Sbjct 2374081 CGTCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCAGGACCCTTGCGGACTACAACATC 2374022 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || ||||| || || ||||| Sbjct 2374021 CAAAAGGAGTCAACCCTCCACCTTGT 2373996 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || |||||||| |||||||| || ||| Sbjct 2373517 CAGATCTTCGTCAAGACTCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGAC 2373458 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 2373457 ACTATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 2373398 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| ||||| ||||| || |||||| || Sbjct 2373397 CGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCTGACTATAACATC 2373338 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 2373337 CAGAAGGAGTCCACCCTCCACCTGGT 2373312 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||||||||||||||| || ||| Sbjct 2373973 CAGATCTTCGTAAAGACTCTGACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCTGAC 2373914 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 2373913 ACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAG 2373854 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| ||||| || || || || ||| || Sbjct 2373853 CGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTGGCTGACTACAACATC 2373794 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 2373793 CAGAAGGAGTCGACCCTTCACCTTGTT 2373767 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || || || ||||| | || || || ||||| ||| Sbjct 2373061 CAGATCTTTGTGAAGACATTGACTGGGAAGACCATCACTTTGGAAGTTGAGAGCTCGGAC 2373002 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| || || ||||| || |||||||| Sbjct 2373001 ACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAGCAG 2372942 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || || ||||| || ||| || Sbjct 2372941 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCGCCGACTACAACATC 2372882 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 2372881 CAGAAGGAGTCTACCCTTCACCTGGT 2372856 >seq4 Length=21479432 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| || || || |||||| | ||||| || || ||| Sbjct 18578642 CAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCATCGGAC 18578701 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 18578702 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 18578761 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || ||||| || |||||| || Sbjct 18578762 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCCTTGCTGACTATAACATC 18578821 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 18578822 CAGAAGGAGTCCACCCTGCACCTTGT 18578847 Score = 174 bits (192), Expect = 4e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||| | ||||| || || ||| Sbjct 18579081 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGTCATCGGAC 18579140 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 18579141 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 18579200 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || |||||||| |||||| || Sbjct 18579201 CGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTATAACATC 18579260 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || ||||| |||||| || | ||| Sbjct 18579261 CAGAAGGAGTCGACCCTGCACCTTGTTCTGCGCCTC 18579296 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||| | ||||| || ||| || Sbjct 18578186 CAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCCGAT 18578245 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||| || ||||||||||| |||||||| Sbjct 18578246 ACGATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCTCCAGACCAGCAG 18578305 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || ||||| || ||||| | || ||||| || |||||| || Sbjct 18578306 CGTCTTATATTCGCCGGCAAGCAGCTTGAGGATGGGCGTACACTTGCAGACTATAACATC 18578365 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || |||| ||||| Sbjct 18578366 CAGAAGGAATCCACCTTGCACCTTGT 18578391 Score = 122 bits (134), Expect = 2e-22 Identities = 148/206 (72%), Gaps = 17/206 (8%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||| ||||| || ||| ||| Sbjct 18578870 CAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCTGAC 18578929 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 18578930 GGCC-----------------AAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAG 18578972 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || ||||| || |||||| || Sbjct 18578973 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTATAACATC 18579032 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||| ||||| Sbjct 18579033 CAGAAGGAGTCCACCTTGCACCTTGT 18579058 >seq5 Length=20131956 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || |||||||| || || || || ||||||||||| || ||||||||| Sbjct 16284238 CAAATTTTCGTCAAGACTCTCACCGGCAAGACTATTACCCTCGAGGTTGAGAGCTCAGAC 16284297 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||| |||||||| || || || || || || ||||| Sbjct 16284298 ACCATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 16284357 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || || ||||| || ||||| | || ||||| || || ||| || Sbjct 16284358 AGACTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAACATC 16284417 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 16284418 CAGAAGGAGTCTACCCTCCACCTAGT 16284443 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||||||||| || || || || || ||||| || ||||| ||| Sbjct 16284466 CAGATCTTTGTCAAGACTCTCACAGGCAAGACCATTACTCTGGAGGTTGAGAGCTCCGAC 16284525 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| |||||||| |||||||| Sbjct 16284526 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAGCAG 16284585 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || |||||||| || || | Sbjct 16284586 CGGCTGATCTTCGCCGGCAAGCAGCTGGACGATGGCCGCACCCTTGCCGACTACAATATT 16284645 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 16284646 CAGAAGGAGTCCACCCTCCACCTGGT 16284671 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || |||||||| ||| ||| Sbjct 2691781 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCGGAC 2691840 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 2691841 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 2691900 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||||| || ||| || Sbjct 2691901 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 2691960 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 2691961 CAGAAGGAGTCGACCCTCCACCTGGT 2691986 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || || ||||| ||||| || ||| ||| Sbjct 16283782 CAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCCGAC 16283841 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| || ||||||||| Sbjct 16283842 ACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCAGACCAGCAA 16283901 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| ||||| || || || || ||| | Sbjct 16283902 CGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTGGCTGACTACAACATT 16283961 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 16283962 CAGAAGGAGTCCACCCTCCACCTGGT 16283987 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || ||||| || |||||||| |||||||| ||| || Sbjct 16284010 CAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTTGAGGTGGAGTCCTCCGAT 16284069 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||| |||||||| || || || || ||||||||||| Sbjct 16284070 ACCATTGACAATGTTAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 16284129 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| ||||||||||| || || ||||| || || || || ||| || Sbjct 16284130 CGTCTGATCTTTGCCGGCAAACAGCTCGAGGACGGCAGGACCCTAGCTGACTACAACATC 16284189 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 16284190 CAGAAGGAGTCCACCCTTCACCTTGT 16284215 >seq6 Length=21794218 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||| || ||||| || ||||| || ||||||| Sbjct 19646174 CAGATCTTCGTCAAGACCCTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCCTCAGAC 19646233 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || ||||||||||||||||| Sbjct 19646234 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 19646293 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || || || || ||| || Sbjct 19646294 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAACATC 19646353 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || ||||| || || |||||||| | || ||||| Sbjct 19646354 CAGAAGGAATCCACCCTCCATCTTGTGCTCAGGCTCAG 19646391 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || ||||| || ||||| || ||| ||| Sbjct 19645946 CAGATCTTCGTCAAAACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCGGAC 19646005 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || ||||||||||||||||| Sbjct 19646006 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 19646065 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || || || || ||| || Sbjct 19646066 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAACATC 19646125 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || ||||| || || || ||||| | || ||||| Sbjct 19646126 CAGAAGGAATCTACCCTCCACCTTGTGCTCAGGCTCAG 19646163 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| || ||||| || ||| ||| Sbjct 19646402 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACACTTGAGGTCGAGTCCTCGGAC 19646461 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 19646462 ACGATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 19646521 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || || || || ||| | Sbjct 19646522 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACACTGGCTGACTACAACATA 19646581 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || ||||| || || || || || | || ||||| Sbjct 19646582 CAGAAGGAATCCACCCTCCACCTGGTGCTCAGGCTCAG 19646619 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || |||||| | ||||| || ||| ||| Sbjct 19646630 CAGATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCGGAC 19646689 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || || || ||||||||||| Sbjct 19646690 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 19646749 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || ||||| |||| ||||| ||||| ||| || Sbjct 19646750 CGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGGCGGACCCTTGCGGATTACAACATC 19646809 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 19646810 CAGAAGGAGTCCACCCTCCAT 19646830 >seq1 Length=33916305 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || |||||||| ||| ||| Sbjct 9799473 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCGGAC 9799414 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 9799413 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAG 9799354 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||||| || ||| || Sbjct 9799353 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 9799294 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 9799293 CAGAAGGAGTCGACCCTCCACCTGGT 9799268 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 ||||||| || || || || | || ||| | || ||||| || | || ||| |||||| Sbjct 19118801 TCGTGAAGACCCTGACTGGCAGGACCATCGCGCTTGAGGTCGAGAACTGCGACTCCATCG 19118860 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 |||| | ||| | | || || |||| || || |||| |||||||||| || || | Sbjct 19118861 AGAATATAAAAGAGAGAATCCACGACAGGGAGGGCGTCCCGTCGGACCAGCAGCGGCTCA 19118920 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| ||||| || || || | || || || || || ||| ||| || | Sbjct 19118921 TCTTCGCCGGCGGCCAGCTGGAGGACGGCCGCACACTGGCTGACTACAACATCCGGAACG 19118980 Query 178111 AATCAACACTG 178121 | || || ||| Sbjct 19118981 AGTCGACGCTG 19118991 >seq320 Length=2409 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || |||||||| || ||||| || ||| ||| Sbjct 764 CAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTCGAGAGCAGCGAC 705 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||||||||||||||| ||||| |||||||| ||||| Sbjct 704 ACCATCGAGAACGTCAAGACCAAGATCCAGGACAAGGAAGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203692781790254