Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5 188 7e-43 seq1 187 2e-42 seq4 149 6e-31 seq2 140 3e-28 seq6 136 4e-27 seq9 109 5e-19 >seq5 Length=20131956 Score = 188 bits (208), Expect = 7e-43 Identities = 183/233 (79%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 2692006 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 2691947 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| |||||||||||||||||||| || |||||||| ||||||| | Sbjct 2691946 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 2691887 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| ||| || |||| ||| | | | ||||| |||||| Sbjct 2691886 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTCC 2691828 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 2691827 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 2691775 Score = 132 bits (146), Expect = 4e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || ||| |||||||||||| || ||||||| |||||||| Sbjct 16284680 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTGCGG 16284621 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | ||||| ||||||||||||||||| ||||| ||||| ||||| | || | || ||| Sbjct 16284620 CCATCGTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCTTCC 16284561 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || |||| ||| | | | |||||| ||| ||||||| || Sbjct 16284560 TTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGT 16284502 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || ||||| || || ||||||||| Sbjct 16284501 AATGGTCTTGCCTGTGAGAGTCTTGACAAAGATCTGCATG 16284462 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || || ||| ||||||||| ||||| ||||| | ||||| | |||| ||| Sbjct 16284215 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTGCCGTCCTCG 16284156 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| |||||||| || ||||| ||||| ||||||| ||||| || |||||||||| | Sbjct 16284155 AGCTGTTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 16284096 Query 41774 ATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || ||| ||| ||| | || | | ||| ||||||||||| | || || || || Sbjct 16284095 ATCTTTGCCTT-AACATTGTCAATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTT 16284037 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| ||||| || || || |||||| Sbjct 16284036 TCCAGTCAAGGTCTTGACAAAGATTTGCATG 16284006 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||||| || || ||| ||||||||||||||| ||||| | Sbjct 16284006 GCCTCCCCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 16283947 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || |||||||||||||| ||||| || || || || ||||| | ||| Sbjct 16283946 CAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCTGGGGG 16283887 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| || | || || | ||| | | | |||||| ||||| | Sbjct 16283886 GATCCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGGACTCAA 16283828 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||||| || || || || || ||||| || || |||||||| Sbjct 16283827 CCTCAAGGGTTATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 16283779 Score = 109 bits (120), Expect = 5e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || ||||||||| ||||| ||||| | |||||||| | || || Sbjct 16284444 CACTAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 16284385 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| ||||| || || | ||| || || | ||||| || |||||||||| Sbjct 16284384 CAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 16284325 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828 ||| ||| |||| ||| | | | ||||| ||| ||| ||||| | || || | Sbjct 16284324 GATCTTTGCCTTC-ACGTTGTCGATGGTGTCTGAGCT---CTCAACCTCGAGGGTAATAG 16284269 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || ||||| |||||||| ||||| Sbjct 16284268 TCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 16284235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || | | |||||| || ||||| ||||||||| ||| |||||| Sbjct 14452986 CCGCCGCCGCGGAGGTGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGCCGTAGTCG 14453045 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGC 41751 | |||||||| |||| || |||||||| |||||||| || || ||||| || || || Sbjct 14453046 GCCAGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGCTCAGGC 14453105 Query 41752 GGGA 41755 |||| Sbjct 14453106 GGGA 14453109 >seq1 Length=33916305 Score = 187 bits (206), Expect = 2e-42 Identities = 185/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 9799248 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 9799307 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752 ||||||||| |||| |||||||||||||||||||| || |||||||| |||||| ||| Sbjct 9799308 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 9799367 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| | | |||||||||| ||| || |||| ||| | | | ||||| ||||| Sbjct 9799368 GGATC-CCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTC 9799425 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 9799426 CACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9799479 >seq4 Length=21479432 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||| ||| ||||||||| ||||||||||| | Sbjct 18578865 CCTCCACGAAGACGAAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 18578806 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || |||||||| ||||||| ||| Sbjct 18578805 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 18578746 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 18578745 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGATGACTCGAC 18578687 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || || || ||||| ||||| || |||||| Sbjct 18578686 CTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCATG 18578638 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| || ||||||||| ||||||||||||| Sbjct 18579304 CCACCACGGAGGCGCAGAACAAGGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGCA 18579245 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||||||||| || |||||||| ||||||| ||| Sbjct 18579244 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 18579185 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 18579184 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGATGACTCGAC 18579126 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || || || ||||| ||||| ||||||||| Sbjct 18579125 CTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATG 18579077 Score = 125 bits (138), Expect = 7e-24 Identities = 163/228 (71%), Gaps = 17/228 (7%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| ||||||||| ||||||||||| | Sbjct 18579077 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGC 18579018 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||||||||| || |||||||| ||||||| ||| Sbjct 18579017 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 18578958 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || | || || || ||||| || Sbjct 18578957 GATGCCTTCCTTGTCCTGGATCTT---------GGCCGTCAGAG--------GACTCAAC 18578915 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 18578914 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 18578867 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| ||||||||| ||||||||||| | Sbjct 18578638 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCTGC 18578579 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||| || || || || ||||| ||||| | || Sbjct 18578578 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGTGG 18578519 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || |||| || | | | ||||| |||||| | Sbjct 18578518 GATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCTATTGTGTCTGACGACTCGA 18578460 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 18578459 CCTCTAGGGTAATTGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 18578410 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| |||||||| ||||||||||| | Sbjct 18578410 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCTGC 18578351 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || ||| | || || |||||||||||||||||||| || ||||| ||||| | || Sbjct 18578350 AAGTGTACGCCCATCCTCAAGCTGCTTGCCGGCGAATATAAGACGCTGCTGGTCTGGAGG 18578291 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || |||| || | | | || ||| ||||| | Sbjct 18578290 GATTCCCTCCTTGTCCTGGATCTTAGCCTTC-ACATTGTCAATCGTATCGGAGGACTCGA 18578232 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 18578231 CCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 18578183 >seq2 Length=27082872 Score = 140 bits (154), Expect = 3e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || ||| ||||||||| ||||||||||| | Sbjct 2373294 CCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 2373353 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || |||||||||||||| || || || || ||||| ||||||| ||| Sbjct 2373354 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 2373413 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || ||| || | || | |||||| ||||||| Sbjct 2373414 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATAGTGTCAGAAGACTCCA 2373471 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 2373472 CCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 2373521 Score = 122 bits (134), Expect = 8e-23 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||| ||||| ||||||| | Sbjct 2372838 CCACCACGGAGACGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2372897 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| ||||| ||||| ||||| | ||| Sbjct 2372898 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 2372957 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTC---GCTCGACTC 41811 | | |||||||||| ||| || ||||| | | | | ||||| ||| ||| Sbjct 2372958 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCA-ATGGTGTCCGAGCT---CTC 2373013 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || || || || |||| ||||| || || |||||||| Sbjct 2373014 AACTTCCAAAGTGATGGTCTTCCCAGTCAATGTCTTCACAAAGATCTGCAT 2373064 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || || ||||||||| ||||| ||||| | Sbjct 2373749 GCCACCACGGAGGCGGAGAACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGC 2373808 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || || ||||||||||| ||||| || || ||||| || |||| ||| Sbjct 2373809 CAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGGGG 2373868 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || | || || | ||| | | | ||||| ||||||| Sbjct 2373869 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCA 2373927 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||||||||| ||||||||| Sbjct 2373928 CCTCGAGGGTGATAGTCTTGCCAGTCAGAGTCTTTACGAAGATCTGCATG 2373977 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||| ||||||||||| | Sbjct 2373066 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCAGCA 2373125 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || |||||||||||||| || || || || ||||| ||||||| ||| Sbjct 2373126 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 2373185 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||||||| ||| || |||| || | | | || || ||| ||| Sbjct 2373186 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATGGTATCTGAGCT---CTC 2373241 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || ||||| || || || || ||||| || || |||||||| Sbjct 2373242 AACCTCCAGAGTGATCGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2373292 Score = 109 bits (120), Expect = 5e-19 Identities = 165/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || || |||||| || ||||| ||||| | Sbjct 2373977 GCCACCACGGAGGCGGAGGACAAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCCGC 2374036 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | |||| || |||||||||||||| || || || ||||| || |||| ||| Sbjct 2374037 AAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGGGG 2374096 Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGAC 41809 | || |||||||||| ||| || ||| | | | ||| | ||||| |||| Sbjct 2374097 GATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATG-----GTGTCAGACGAC 2374151 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| | || || || || || ||||| ||||| || || |||||||| Sbjct 2374152 TCCACCTCGAGGGTGATAGTCTTGCCGGTCAGTGTCTTCACAAAGATCTGCAT 2374204 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||| ||||| | ||||| | | || || ||||||||||| || || Sbjct 2373558 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 2373617 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || ||||| ||||||| || | || |||||||||| || | || || | ||| Sbjct 2373618 ATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGGATCTTAGCCTTGACGTT 2373676 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| || |||||||| | || || || || |||||||| ||||| || Sbjct 2373677 GTCAATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGAC 2373736 Query 41851 GAAAATCTGCATG 41863 ||| ||||||||| Sbjct 2373737 GAAGATCTGCATG 2373749 >seq6 Length=21794218 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||||| ||| || ||| ||||||||| ||||| || || | Sbjct 19646854 GCCACCACGGAGGCGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGC 19646795 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| ||| | || || |||||||||||||| || ||||| ||||| ||||||| ||| Sbjct 19646794 AAGGGTCCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGG 19646735 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| || |||| ||| | | | ||||| ||||| | Sbjct 19646734 AATACCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCCGAGGACTCAA 19646676 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| || || |||||||| Sbjct 19646675 CCTCCAAGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 19646627 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || ||| ||||||||| ||||| ||||| | |||||||| | || || Sbjct 19645924 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 19645865 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| ||||| || || ||||| ||||| | ||||| || |||||||||| | Sbjct 19645864 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-T 19645806 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || |||| ||| | | | || || ||||||||||| | || || || | Sbjct 19645805 GGATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCT 19645746 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| || ||||||||||| Sbjct 19645745 TGCCGGTGAGTGTCTTCACAAAAATCTGCAT 19645715 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| ||||| || ||| |||||||| ||||| ||||| | |||||||| | || || Sbjct 19646380 CACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTC 19646321 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| ||||| || || ||||| ||||||| || | || |||||||||| Sbjct 19646320 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 19646261 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| ||| | | | ||||| ||||| ||||| | || || || | Sbjct 19646260 GATCTTGGCCTTC-ACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGGTCT 19646202 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||| ||||| ||||| ||||||||| Sbjct 19646201 TTCCGGTCAGGGTCTTGACGAAGATCTGCATG 19646170 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || ||| |||||||| ||||| ||||| | || ||||| | || || Sbjct 19646608 CACCAGGTGGAGGGTGGATTCCTTCTGTATGTTGTAGTCAGCCAGTGTGCGGCCATCCTC 19646549 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||||||| || || || ||||| ||||||| ||| | | |||||||||| Sbjct 19646548 GAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 19646489 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| ||| | | | ||||| ||||| ||||| | || || || | Sbjct 19646488 GATCTTGGCCTTC-ACGTTGTCAATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCT 19646430 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || || || ||||| ||||| ||||||||| Sbjct 19646429 TGCCAGTAAGGGTCTTGACGAAGATCTGCATG 19646398 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||| ||||| | |||||||| | || || ||||||||||| ||||| Sbjct 19646133 TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 19646074 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || ||||| ||||||| || | || |||||||||| ||| || |||| ||| Sbjct 19646073 ATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTT 19646015 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| ||||| ||||| | ||| || || || || ||||| || || || Sbjct 19646014 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTTTTGAC 19645955 Query 41851 GAAAATCTGCAT 41862 ||| |||||||| Sbjct 19645954 GAAGATCTGCAT 19645943 >seq9 Length=14105664 Score = 109 bits (120), Expect = 5e-19 Identities = 98/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | || || || |||||| ||||||||| ||||| ||||| | Sbjct 13888722 GCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGC 13888663 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 |||||||| | || || ||||||||||||||||| || |||||||| |||||| |||| Sbjct 13888662 AAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 13888603 Query 41754 GA 41755 || Sbjct 13888602 GA 13888601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462289605009200