Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22] 25,599 sequences; 303,294,962 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq10092 140 3e-28 seq10866 125 6e-24 seq2330 122 8e-23 seq17240 118 9e-22 seq5881 113 4e-20 seq11087 109 5e-19 seq7833 109 5e-19 seq7832 104 2e-17 seq1402 104 2e-17 seq13224 100 2e-16 seq17239 98.7 9e-16 seq18466 87.8 2e-12 seq18333 84.2 2e-11 >seq10092 Length=22630 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || ||||||||||| ||| | ||||| |||||| Sbjct 17704 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 17645 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| ||||||| | |||||| || || || ||||||||||| || Sbjct 17644 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 17585 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| | |||||| ||||| | ||| | || || Sbjct 17584 GATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTT 17525 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || ||||||||||| Sbjct 17524 GCCAGTGAGAGTCTTGACGAAAATCTGCAT 17495 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || || || || || |||||||| || | |||||| ||| |||| Sbjct 17019 CAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGA 16960 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || |||||| |||||||||||||||| || || || || ||||||||||| | Sbjct 16959 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGA 16900 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | ||| |||| | ||| ||||| | ||| | || |||| Sbjct 16899 TCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGC 16840 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| || ||||| |||||||| Sbjct 16839 CAGTGAGAGTCTTCACAAAGATCTGCAT 16812 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| |||||||| || ||||||||||| ||| | || || ||| || Sbjct 17932 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 17873 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| || |||||||| || || || || || |||||||| Sbjct 17872 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 17813 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||| || | |||||| ||||| | || | || || Sbjct 17812 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTCTT 17753 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || || |||||||| Sbjct 17752 GCCAGTGAGAGTCTTGACGAAGATCTGCAT 17723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | || | |||||||||||| || ||| Sbjct 17235 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 17176 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||| || || || || ||||||||||| || ||| ||| Sbjct 17175 GCAAAGATCAGACGCTGCTGGTCCGG-GGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 17117 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | || || | ||| ||||| | ||| | || ||||| |||| || Sbjct 17116 ACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 17057 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || ||||| || |||||| || Sbjct 17056 TTGACAAAGATTTGCATGCCT 17036 >seq10866 Length=43988 Score = 125 bits (138), Expect = 6e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCT 118587 ||||| ||| | || ||||| || || ||||||||||| ||| | ||||| ||||| Sbjct 18397 CACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT-AAGGTGCGGCCATCCT 18455 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||||| || ||||| |||| || ||||||||||| || || |||| ||||||||| Sbjct 18456 CGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCCT 18515 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| ||| ||| || | || | ||||| | ||| ||||| | ||| | |||| Sbjct 18516 GAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTT 18575 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || ||||| || ||||| Sbjct 18576 TGCCGGTCAATGTCTTGACAAAGATTTGCAT 18606 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | |||||||| || || || ||||| || || | ||| ||||| Sbjct 18625 CACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCAGGGAGCGTCCGTCCTC 18684 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||| |||||||| || | || |||||||||||||| Sbjct 18685 GAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTGTCCTG 18744 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| || || | ||||||||| | || | || || Sbjct 18745 AATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTT 18804 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||||||| || || ||||||||||||||| || Sbjct 18805 TCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 18838 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || |||||||| |||||||||||||| | ||||| ||||| Sbjct 18853 CACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTC 18912 Query 118589 GAGCTGTTTT-CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 || || ||| || || ||||||| |||||||| || || || || ||||||||||| Sbjct 18913 AAGTTGCTTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATTCCCTCCTTGTCCT 18972 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || || || | || | ||| | | | ||| ||||| | ||| | || | Sbjct 18973 GAATCTTGGCCTTGACATTGTCAATCGTGCCAGAGGACTCAACCTCTAGGGTTATGGTCT 19032 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || ||||| |||||||| Sbjct 19033 TGCCAGTGAGTGTCTTCACAAAGATCTGCAT 19063 >seq2330 Length=21218 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||| | |||||| ||||| Sbjct 4227 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 4286 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| ||||||| |||||||| ||||| || || ||||||||||| Sbjct 4287 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 4346 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||| ||||| | || | ||| || Sbjct 4347 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTT 4406 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 4407 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 4436 >seq17240 Length=28509 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || |||||||| ||||| ||||| || | |||| ||||||| Sbjct 21435 CAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCCTCGA 21494 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTA 118649 |||| || || ||| ||||||| |||||||| || ||||| ||||||||||||| ||| | Sbjct 21495 GCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGA 21554 Query 118650 ATTTT-------TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| || || || | |||| |||||| | ||| ||||||| ||| | Sbjct 21555 TCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGAT 21614 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||||||||||||| || ||||| |||||||| Sbjct 21615 GGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 21650 >seq5881 Length=10397 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||| | ||||| |||||| Sbjct 10168 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTC 10227 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||| ||||||||||| || || || || ||||||||||| Sbjct 10228 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 10287 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||| | |||||| ||||| | || | || || Sbjct 10288 GATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTCTT 10347 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || || || |||||||| Sbjct 10348 CCCAGTCAAGGTCTTCACGAAGATCTGCAT 10377 >seq11087 Length=17449 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| ||| | ||||| |||||| Sbjct 11959 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTC 11900 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || || || |||||||| Sbjct 11899 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTG 11840 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||| ||||| | || | || || Sbjct 11839 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 11780 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 11779 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 11750 >seq7833 Length=8852 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 || ||||| |||||||| || | ||||| |||||||||||| || ||||| || Sbjct 8816 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 8757 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667 |||||||||||||| || || || || ||||||||||| || || || || | Sbjct 8756 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 8697 Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 |||| ||||| | | ||||||||| | ||| | || |||||||| || || || || Sbjct 8696 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 8637 Query 118728 AAAATCTGCATGGCT 118742 || || |||||| || Sbjct 8636 AATATTTGCATGCCT 8622 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| ||||| | ||| ||| |||||| ||||| || ||| Sbjct 8594 GTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCA 8535 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || || ||||| || ||||| |||||||||||||| ||| || || Sbjct 8534 GCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 8475 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | || || | | ||| ||||| | ||| | || ||||| || || || Sbjct 8474 ACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 8415 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 8414 TTAACGAATATCTGCAT 8398 >seq7832 Length=9206 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| || ||| | ||||| |||||||||||| || || Sbjct 226 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 167 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| ||||||| |||||||| || ||||| ||||||||||| || || || || Sbjct 166 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 107 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | ||| ||||| | || | || ||||| || || || Sbjct 106 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTC 47 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 46 TTCACGAAGATCTGCAT 30 >seq1402 Length=13741 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| ||| || |||||| ||||| Sbjct 4587 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 4528 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| ||||||| |||||||| || || || || ||||||||||| Sbjct 4527 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 4468 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || || || | | || ||||| ||||||| ||||| | || | || || Sbjct 4467 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 4408 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 4407 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 4378 >seq13224 Length=26385 Score = 100 bits (110), Expect = 2e-16 Identities = 333/510 (65%), Gaps = 10/510 (2%) Strand=Plus/Plus Query 44794 CGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACTTTGGC 44853 ||||||| | |||||||| ||||| ||| | || |||| | || || || Sbjct 15950 CGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCGGCGAGCGC---TTCGC 16006 Query 44854 CGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTT-TGCGG 44912 ||| || | ||||| |||||| ||||| || | ||||| ||||| || |||| Sbjct 16007 CGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCATTCTGCGC 16066 Query 44913 CGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGA 44972 | || || | | || | ||| | ||||| || || || || |||||| | | Sbjct 16067 C-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 16125 Query 44973 TTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCG 45032 | || | ||||| ||||| ||| | |||| ||||||||| || || || || Sbjct 16126 TCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCCTGCCTC--CTCTACGACCTCCTCCG 16183 Query 45033 ATCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGA 45092 || | | |||| | | |||| | || || || |||| ||||||| |||||||| Sbjct 16184 CGGCAA-GCTCGACGAGTCACGCGTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGA 16242 Query 45093 TGGAATTTTT-TGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATG 45151 ||| || | ||| || || || |||| || | || || ||||||| | | ||| Sbjct 16243 GGGAGTTCGTCTGC-GACGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATG 16301 Query 45152 AGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATG 45211 || ||||||| ||||| |||||||| || || ||| | | | || |||||| Sbjct 16302 AGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTCGGGTGCAAGAAGATG 16361 Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271 ||| | | ||||| ||||| | ||| | || || || ||||||| || || Sbjct 16362 TACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAAC 16421 Query 45272 ttttttGAGAAACGCGTCGGCGAATACAAG 45301 || || ||||| ||||||||||| ||| || Sbjct 16422 TTCTTCGAGAAGCGCGTCGGCGACTACCAG 16451 >seq17239 Length=15006 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || ||||| || ||||||||||| || | ||||| ||||||| Sbjct 3571 CAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGA 3630 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || || |||| || |||||||| || || || ||||||||||| || | Sbjct 3631 GCTGCTTGCCGGCAAAGATAAG-CGCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGA 3689 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||||| | ||| ||||| | ||| | | |||| Sbjct 3690 TCTTCGCCTTCACATTGTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGC 3749 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||||| ||||| |||||||| Sbjct 3750 CGGTCAGGGTTTTCACAAAGATCTGCAT 3777 >seq18466 Length=31617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || ||||||||||| ||| || |||||| ||| || Sbjct 14432 ACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCC 14373 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || || ||| | || | |||||| ||||| ||||| || || |||||||| Sbjct 14372 AGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 14317 >seq18333 Length=36510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || ||||||||||| ||| || ||||| |||||| Sbjct 2393 CACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 2334 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATC 118624 |||||| || || ||| |||||||||||||||| || Sbjct 2333 GAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTC 2298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433695050202508