Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1402 131 1e-25
seq2330 127 1e-24
seq10092 122 6e-23
seq11087 114 8e-21
seq10866 114 8e-21
seq17240 107 1e-18
seq7832 104 2e-17
seq17239 100 2e-16
seq10216 96.9 2e-15
seq7833 95.1 8e-15
seq18227 91.5 1e-13
seq6022 91.5 1e-13
seq5881 89.7 3e-13
>seq1402
Length=13741
Score = 131 bits (144), Expect = 1e-25
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 4604 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 4545
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
||| || |||| |||| ||||||||| ||||| |||||||||||||||| || ||||
Sbjct 4544 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 4485
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATCGGCTATCGAATCGGTCGATTCGA 34340
| | ||||||||| | ||| ||| | | || | |||| ||| | || |
Sbjct 4484 -ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTG-GATCGTGTCGCTGCTCTCCA 4427
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
| |||| ||||||||| || || || || || ||||| ||||||||||||
Sbjct 4426 CCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 4377
Score = 114 bits (126), Expect = 8e-21
Identities = 172/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 34150 GATTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTAT 34209
||| |||| | |||| ||| || | ||||| ||||| | || || ||||| ||
Sbjct 9053 GATGTCGTTCATGCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGAT 8994
Query 34210 GTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTG 34269
||||||||||| |||| || |||| |||| ||||||||| ||||| |||||||||||
Sbjct 8993 GTTGTAGTCGGCCAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTG 8934
Query 34270 CTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAAT 34328
||||| || |||| |||| |||| ||||| ||| | ||| | | | | ||| |
Sbjct 8933 CTGGTGCGGCGGG-ACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGT 8875
Query 34329 CGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCA 34388
|| ||||| | | ||||||||| | ||| | || || ||||| || |||||||
Sbjct 8874 CGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCA 8815
Query 34389 TC 34390
||
Sbjct 8814 TC 8813
>seq2330
Length=21218
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| |||||||||||||
Sbjct 4210 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 4269
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||||||||| ||||| |||||||||||||||||| ||
Sbjct 4270 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 4329
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 4330 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 4389
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| |||||| || || || || || || ||||| ||||||||||||
Sbjct 4390 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 4437
>seq10092
Length=22630
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| ||||||||||||| || |||| | ||
Sbjct 17934 AGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 17875
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| ||| | | ||||||||
Sbjct 17874 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 17815
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | ||||| || || |||| || |||||
Sbjct 17814 TGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTC 17755
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| |||||||| || || |||||||||||
Sbjct 17754 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 17723
Score = 120 bits (132), Expect = 2e-22
Identities = 149/203 (73%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||||||||| | ||| || | || || | ||||||||| |||||
Sbjct 17003 TTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAA 16944
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||| ||||||||||| || | | ||||||||| ||||| ||||| ||
Sbjct 16943 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATT 16884
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | || || || || | || ||||| ||||| |||||||| |||||
Sbjct 16883 GTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 16824
Query 34378 AAAGATCTGCATC-GCTCGAATG 34399
||||||||||||| || |||||
Sbjct 16823 AAAGATCTGCATCTGCAAGAATG 16801
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || | | | || |||| ||||||||| || |||
Sbjct 17457 TCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAA 17398
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| ||| | || ||||||||| ||||| ||| | | |
Sbjct 17397 ATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 17338
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| |||| || | || || || || | ||| ||||| ||||| || || || ||||||
Sbjct 17337 TCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACA 17278
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 17277 AAGATCTGCAT 17267
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||||| ||| || ||||| ||||||||||||| || ||| | ||
Sbjct 17706 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCC 17647
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||| || ||||| ||||| | ||||||||| ||| | || |||||| ||
Sbjct 17646 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 17587
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || || |||| || || ||
Sbjct 17586 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTC 17527
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| |||||||| || || || ||||||||
Sbjct 17526 TTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 17495
>seq11087
Length=17449
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||| ||||| | || || ||||| |||||||||||||
Sbjct 11976 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 11917
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| ||||| ||||| ||||||||||| |||
Sbjct 11916 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 11857
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 11856 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 11797
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| ||||||||| || || || || || ||||| ||||||||||||
Sbjct 11796 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 11749
>seq10866
Length=43988
Score = 114 bits (126), Expect = 8e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||| ||||| ||||| | ||| || || || || |||||||| | ||| ||
Sbjct 18617 AGCCTGAGCACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCAGGGAGCGT 18676
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
|||| || | ||||||||| ||||| |||| ||||||||||| ||| | || ||||
Sbjct 18677 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCC 18736
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
||||| ||||| ||| | || | | || | ||| | || ||||| || | |||
Sbjct 18737 TTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTA 18796
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||| || || || ||||| ||||||||
Sbjct 18797 ATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 18834
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC-GGA 34221
|| ||||| || | ||||||||||| || || || ||||| |||||||| || |
Sbjct 18380 CCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 18439
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || ||| | || || | ||||||||| || || || || |||||||| || |||
Sbjct 18440 AAGGTG-CGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGG 18498
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| |||||||||||| |||||| |||| | | | || | || | ||| || ||
Sbjct 18499 AATGCTCTCCTTGTCCTGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAAC 18558
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || |||||||||||||| | || || |||||||| |||||
Sbjct 18559 CTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 18606
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/229 (70%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | |||||| ||||| ||||| | || |||||||| |||||||| || |
Sbjct 18836 CCTCCCCTCAGCCTAAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCG 18895
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTT-GCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || |||| || | ||||| ||| || || ||||| ||||||||||| ||
Sbjct 18896 AGGGTGCGTCCGTCCTCAAGTTGCTTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGG 18955
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| ||||| ||| | || | | |||| | | || || ||
Sbjct 18956 AATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGCCAGAGGACTCAAC 19015
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || ||||| ||||| ||||| || ||||||||||||||||||
Sbjct 19016 CTCTAGGGTTATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCATC 19064
>seq17240
Length=28509
Score = 107 bits (118), Expect = 1e-18
Identities = 143/200 (72%), Gaps = 8/200 (4%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| || |||||||| | || | || | || || | |||||| || |||||
Sbjct 21452 TCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCCTCGAGCTGCTTACCGGCGAAG 21511
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT--------TGCT 34310
||||| ||||||||||| || | || ||||||||| |||||| ||||
Sbjct 21512 ATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTACCTTCACTGCT 21571
Query 34311 TTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAG 34370
| | || | | || | |||| || || || || | ||||||| |||||||| ||||
Sbjct 21572 TCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGGTGATGGACTTGCCGGTCAGAG 21631
Query 34371 TTTTCACAAAGATCTGCATC 34390
| ||||||||||||||||||
Sbjct 21632 TCTTCACAAAGATCTGCATC 21651
>seq7832
Length=9206
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || ||||| | || || ||||| ||||| |||||||
Sbjct 256 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 197
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| ||||| ||||| ||||||||||| ||
Sbjct 196 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 137
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || ||||| ||| | | | | || | || | || || ||
Sbjct 136 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACC 77
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct 76 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 30
>seq17239
Length=15006
Score = 100 bits (110), Expect = 2e-16
Identities = 138/192 (72%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || || | || || | ||||||||| || ||
Sbjct 3588 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCAAAG 3647
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| ||| |||||||||| ||| | || |||||| || ||||| ||| | || |
Sbjct 3648 ATAAGC-GCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTG 3706
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| || || || || | ||||||| |||||||| || |||||||||
Sbjct 3707 TCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCACA 3766
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 3767 AAGATCTGCATC 3778
>seq10216
Length=110639
Score = 96.9 bits (106), Expect = 2e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 101768 CCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 101827
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| ||| |||| |||| |||||| || ||||| |||||||||||||| ||
Sbjct 101828 AGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATC 101880
>seq7833
Length=8852
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34161 ATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG 34220
|| |||| || || | ||| || ||||| | || | |||| || ||||||||||| |
Sbjct 8852 ATACGCC-CGGAGGCGCAGGACAAGGTGCAGGGTGGATCCTTT-TGGATGTTGTAGTCTG 8795
Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
|| ||| | || || | |||||| || || || ||||| ||||||||||| |
Sbjct 8794 CAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTG 8735
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | | ||||||||| ||||| ||| | || | |||| |||| || ||||
Sbjct 8734 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGA 8675
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || ||||| ||||||||||| || ||||| || || |||||
Sbjct 8674 CCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 8626
>seq18227
Length=45862
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 21868 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21809
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| ||| |||| |||| |||||| || ||||| ||||| |||||||||||
Sbjct 21808 AGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTC 21756
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 17160 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 17101
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| ||| | || |||| |||||| || ||||| ||||| |||||||||||
Sbjct 17100 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTC 17048
>seq6022
Length=17457517
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 7780160 CCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 7780101
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| ||| | || |||| |||||| || ||||| ||||| |||||||||||
Sbjct 7780100 AGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTC 7780048
>seq5881
Length=10397
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || || ||||| ||||||||||||| || || | ||
Sbjct 10166 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCC 10225
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 10226 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 10285
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | || | || || |||| ||||||||
Sbjct 10286 TGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTC 10345
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 10346 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 10377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322971205473440
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