Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq10866 138 1e-27
seq2330 122 9e-23
seq10092 116 4e-21
seq17239 114 1e-20
seq1402 113 5e-20
seq11087 109 5e-19
seq7833 105 7e-18
seq5881 104 2e-17
seq17240 100 3e-16
seq7832 95.1 1e-14
seq18227 93.3 4e-14
seq10216 93.3 4e-14
seq6022 87.8 2e-12
seq18333 84.2 2e-11
seq17888 84.2 2e-11
seq12013 82.4 8e-11
>seq10866
Length=43988
Score = 138 bits (152), Expect = 1e-27
Identities = 161/216 (75%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|||||||| || |||| || || ||||| ||||||||||||||||||| |||||| ||
Sbjct 18848 CTAAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCG 18907
Query 64289 TCTTCAAGCTGC-TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|| ||||| ||| ||||| ||| | ||||| ||||||||||| || |||||||| || ||
Sbjct 18908 TCCTCAAGTTGCTTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATTCCCTCCTT 18967
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||| ||| || | || || || || || |||| ||||
Sbjct 18968 GTCCTGAATCTTGGCCTTGACATTGTCAATCGTGCCAGAGGACTCAACCTCTAGGGTTAT 19027
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| || | || || || || || |||||
Sbjct 19028 GGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 19063
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || || |||||||||||||| | |||||| | ||
Sbjct 18395 AGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCCATCC 18454
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || || |||||||| || || ||||| | || || ||
Sbjct 18455 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCC 18514
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||||| || | ||| || | || || || | || | |||
Sbjct 18515 TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTT 18574
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||||||||| || || || || |||||||||
Sbjct 18575 TTGCCGGTCAATGTCTTGACAAAGATTTGCATT 18607
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| |||||||| |||| || || || || || || ||||| || || | || ||| ||
Sbjct 18620 CTGAGCACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCAGGGAGCGTCCG 18679
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| || |||||||||||||| | |||| ||||||||||| | || || || || ||
Sbjct 18680 TCCTCGAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTG 18739
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|| || || || ||| ||| || | ||||||| | || || || | || | |
Sbjct 18740 TCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATG 18799
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||||| || || || ||||| |||||
Sbjct 18800 GTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 18834
>seq2330
Length=21218
Score = 122 bits (134), Expect = 9e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || || | ||||| || || || |||||||| || |||
Sbjct 4210 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 4269
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||||| |||| || |||||||||||||| | |||||||||||||||||||| ||
Sbjct 4270 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 4329
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || || || ||| || || | || || || |||||
Sbjct 4330 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 4389
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | ||||| || |||| || || ||||| || ||||| ||
Sbjct 4390 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 4439
>seq10092
Length=22630
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || ||||| || || |||||||| || || | |||||| | |||
Sbjct 17023 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCT 16964
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | ||||| ||||||||||| || || ||||| || || ||
Sbjct 16963 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 16904
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||||||| || | ||||| || || || || | |||| ||||
Sbjct 16903 TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTC 16844
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || || || || |||||
Sbjct 16843 TTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 16812
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || ||||||||||| || |||| ||| || | |||
Sbjct 17934 AGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 17875
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || || ||||||||||| || ||||| ||||| || ||
Sbjct 17874 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 17815
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | || || || | ||| | ||||
Sbjct 17814 TGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTC 17755
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || ||||| || |||||
Sbjct 17754 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 17723
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || |||||||| || || | ||| | | ||
Sbjct 17250 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 17191
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || || ||||||||||| || ||||| || || || ||
Sbjct 17190 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGG-GGAATCCCCTCCTTGTCC 17132
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| || || | |||||| | || || || | || | |||
Sbjct 17131 TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTC 17072
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| || || || || ||||||||
Sbjct 17071 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 17040
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || |||||||| || |||| ||| | | ||
Sbjct 17478 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCC 17419
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||||||| |||| || ||||||||||| || ||||| || || || ||
Sbjct 17418 TCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 17359
Query 64352 TGTATTTT 64359
|| || ||
Sbjct 17358 TGGATCTT 17351
>seq17239
Length=15006
Score = 114 bits (126), Expect = 1e-20
Identities = 161/225 (72%), Gaps = 1/225 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| || || ||||||||||| || || | |||||| | ||
Sbjct 3567 AGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCC 3626
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||||||| | || || ||||||||||| || ||||| || || || ||
Sbjct 3627 TCGAGCTGCTTGCCGGCAAAGATAAG-CGCTGCTGGTCCGGGGGAATGCCCTCCTTATCC 3685
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||| || | ||||| || | || | || |
Sbjct 3686 TGGATCTTCGCCTTCACATTGTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGAC 3745
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGATA 64456
|||||||||| ||||| || || || ||||| | | || ||||
Sbjct 3746 TTGCCGGTCAGGGTTTTCACAAAGATCTGCATCTGATGAAAGATA 3790
>seq1402
Length=13741
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || || | |||||| || || || |||||||| || ||
Sbjct 4604 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 4545
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| |||| || |||||||||||||| | ||||||||||||||||| || ||
Sbjct 4544 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 4485
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || | || ||| || || | || || | | |||||
Sbjct 4484 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 4425
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| || |||| || || ||||| || |||||
Sbjct 4424 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 4378
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | |||||| || || || |||||||| || || | |||||| ||||
Sbjct 9025 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCC 8966
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | |||||||||||||||| || || | || || | ||
Sbjct 8965 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCG 8906
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || | ||| || ||| || | || | | ||| || | | || | ||||
Sbjct 8905 TGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTC 8846
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| ||| ||| || || ||||| || ||||| ||
Sbjct 8845 CTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 8811
>seq11087
Length=17449
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || || | || || || || || |||||||| || |||
Sbjct 11976 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 11917
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| | || || |||||||||||||| | ||||| ||||||||||| || ||
Sbjct 11916 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 11857
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || || || || || ||| || || | || || || |||||
Sbjct 11856 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 11797
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || |||| || || ||||| || ||||| ||
Sbjct 11796 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 11747
>seq7833
Length=8852
Score = 105 bits (116), Expect = 7e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| ||||| |||||||| ||||| | |||||| | || || |||||||| || ||| |
Sbjct 8816 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 8757
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| ||||||||||| || || ||||| || || || || || || ||| |||
Sbjct 8756 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 8697
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || || || || || | || | |||||||||||| | || || |||
Sbjct 8696 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 8637
Query 64433 AAAATTTGCAT 64443
|| ||||||||
Sbjct 8636 AATATTTGCAT 8626
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || ||||| ||||| |||| || ||| | || ||||||||||||||
Sbjct 8594 GTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCA 8535
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || || |||||||| ||||| || || || || || || || || |||
Sbjct 8534 GCGAAGATAAGGCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 8475
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||| || || || || | || | ||||||||| || | ||
Sbjct 8474 ACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 8415
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 8414 TTAACGAATATCTGCAT 8398
>seq5881
Length=10397
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || || || || |||||||| || |||| |||||| | ||
Sbjct 10166 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCC 10225
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | || || ||||||||||| || ||||| || || || ||
Sbjct 10226 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 10285
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || ||| | || || || | ||| | ||||
Sbjct 10286 TGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTC 10345
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| || || ||||| || |||||
Sbjct 10346 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 10377
>seq17240
Length=28509
Score = 100 bits (110), Expect = 3e-16
Identities = 165/238 (69%), Gaps = 9/238 (4%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || ||||| ||||| ||||| || || | | |||| | ||
Sbjct 21431 AGGACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCC 21490
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| ||||| | ||||| ||||||||||| |||||||| || || || ||
Sbjct 21491 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 21550
Query 64352 TGTATTTTT--------TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAG 64403
|| || ||| ||||| ||| || | || || | ||||| || | |
Sbjct 21551 TGGATCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGG 21610
Query 64404 TTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGAT-ACACT 64460
| | || ||||||||||| ||| || || || || ||||| | | || ||| |||||
Sbjct 21611 TGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCATCTGAGGAAAGATAACACT 21668
>seq7832
Length=9206
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || ||||| || || || | |||||| | || || ||||||||||||
Sbjct 226 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 167
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| ||||||||||| ||||| || || || || || || || || |||
Sbjct 166 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 107
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || ||| || || || || | ||| | ||||||||| || | ||
Sbjct 106 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTC 47
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 46 TTCACGAAGATCTGCAT 30
>seq18227
Length=45862
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || || | |||||| || || || |||||||| || ||
Sbjct 21868 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21809
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| |||| || |||||||| ||||| | ||||| ||||||||||| || ||
Sbjct 21808 AGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 21749
Query 64337 ATTCCT 64342
|| |||
Sbjct 21748 ATACCT 21743
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || || | |||||| || || || |||||||| || ||
Sbjct 17160 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 17101
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| | || || |||||||| || || | ||||| ||||||||||| |||||
Sbjct 17100 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 17041
Query 64337 ATTCCT 64342
|| |||
Sbjct 17040 ATACCT 17035
>seq10216
Length=110639
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| || |||| |||||| || || || |||||||| || ||
Sbjct 101768 CCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 101827
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| ||||||| |||||||| || || | |||||||||||||| || || ||
Sbjct 101828 AGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATCCGGCGGG 101887
Query 64337 ATTCCT 64342
|| |||
Sbjct 101888 ATCCCT 101893
>seq6022
Length=17457517
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | |||||| || |||| ||| || || || || |||||||| || ||
Sbjct 7780160 CCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 7780101
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | || || |||||||| ||||| | ||||| ||||||||||| || ||
Sbjct 7780100 AGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 7780041
Query 64337 ATTCCT 64342
|| |||
Sbjct 7780040 ATACCT 7780035
Score = 86.0 bits (94), Expect = 6e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | || || || || || | || || || || || |||||||| || ||
Sbjct 6547278 ACCGCCACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 6547337
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| |||| || |||||||| ||||| | || |||||||||||||| || ||
Sbjct 6547338 CAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 6547397
Query 64336 AATTCCT 64342
||||||
Sbjct 6547398 GATTCCT 6547404
>seq18333
Length=36510
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || |||| |||||| || || ||||||||||| || || | |||||| | ||
Sbjct 2395 AGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCC 2336
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342
|| |||||||| || || | ||||| ||||||||||| | || || |||
Sbjct 2335 TCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCAGCGGGATACCT 2285
>seq17888
Length=15954
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || || | ||| || || || || |||||||| || || | |||||| | ||
Sbjct 11931 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 11872
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342
|| |||||||||||||| | ||||| ||||||||||| ||||| || |||
Sbjct 11871 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCT 11821
>seq12013
Length=80356
Score = 82.4 bits (90), Expect = 8e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || | ||| | ||| || ||||| |||||||||||||| || | || || |
Sbjct 64468 CTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCTAATGTACGTCCA 64409
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| || ||||| || || |||| |||| |||||||| || ||||| || |||||
Sbjct 64408 TCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTCTTTG 64349
Query 64349 TCTTG 64353
|| ||
Sbjct 64348 TCCTG 64344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499484919909560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |