Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22] 25,599 sequences; 303,294,962 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq12822 365 4e-96 seq13224 306 4e-78 seq2330 150 2e-31 seq1402 145 8e-30 seq7833 127 2e-24 seq11087 123 2e-23 seq5881 118 1e-21 seq10092 114 1e-20 seq18227 105 7e-18 seq10216 102 8e-17 seq17239 100 3e-16 seq10866 98.7 1e-15 seq6022 87.8 2e-12 seq18333 86.0 6e-12 seq17888 82.4 8e-11 >seq12822 Length=10151 Score = 365 bits (404), Expect = 4e-96 Identities = 605/855 (71%), Gaps = 29/855 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || |||| || ||| |||||| Sbjct 2112 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGC 2171 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || ||||||||||| |||||| ||| ||| | || | | ||| Sbjct 2172 TCCATCCAGTCGAAGGGGTTGGCGACGTTGTACATCTTCTTGCAGCCGAGTGCCATGAGG 2231 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | |||||| ||||| |||||||| || |||| |||| || | || | || Sbjct 2232 AGGCGGTCGGCGACGAATTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAG- 2290 Query 132784 CGC-ACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 ||| || || ||||| ||| || ||| | | ||||||| |||| ||||||| ||||| Sbjct 2291 CGCGACGGGGAGCGCGTCGCAGACGAACTCCCT-CTCGATGTCGACGGCGTCGGCGACGA 2349 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGC--TTGAACATCAAGCAAGC 132899 | || | ||||||||| || ||| | |||| | | | | | | | | ||| || Sbjct 2350 TCTCGCGGACGCGCGCCTCG-TCGAGC-TTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGC 2407 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| |||| ||||||||| | ||| ||||| |||||| ||| || | ||| || Sbjct 2408 GAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGG 2467 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 |||||| || || || |||||||| || |||||| ||| |||||| ||||||| || Sbjct 2468 CATGAGCCCCCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCC 2527 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||||||| ||||| || || ||||||||| |||| ||| | || | ||||||| Sbjct 2528 CTCGACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGC--GCT-CGCCGCCGTCGATCCA 2584 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTTCA 133135 ||||| ||||| |||||||| | |||||||| | || ||||||||| | Sbjct 2585 GCGCATGGCCCAGTCGGCCTTGC----GGCGCACGGCCGGGACGGTGTCGATGGCGCGGA 2640 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 ||| ||| ||||| | | || | |||||| |||| || ||| ||||| | Sbjct 2641 ACAGCCGGTCCTTCTCGGCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCT 2700 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 | ||||| | |||||| |||||||| || || ||||| ||| ||||||||| | |||| Sbjct 2701 CGGAGTGGATGTTCTCGATGGCGATCTGGAATCCGTAGAAGGCGCGCGCCTCGGCGACCT 2760 Query 133256 GCACTTCTTGAGCGAAACGCTCGA--CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 |||| || || ||| || || | || || ||| |||||||||||| |||||| Sbjct 2761 GCACGTCG-GACATGAAC-CTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGC 2818 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC----TCCC 133369 ||| ||||| |||||||| |||||| |||||||||| | | | ||||| |||| Sbjct 2819 GAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAC-AGCGCGGCGTCCC 2877 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| ||||| ||| ||| |||||||||||||| | ||||| ||||||||| | || | Sbjct 2878 AGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCT 2937 Query 133430 TTTTGTACATACTCC 133444 | ||||| | ||||| Sbjct 2938 TCTTGTAGA-ACTCC 2951 >seq13224 Length=26385 Score = 306 bits (338), Expect = 4e-78 Identities = 592/855 (69%), Gaps = 29/855 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || |||| || ||| |||||| Sbjct 16453 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGC 16394 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || |||||||| |||||| ||| ||| || | | |||| Sbjct 16393 TCCATCCAGTCGAACGGGTTGGCGACGTTGTACATCTTCTTGCACCCGAGCGCCATGAGC 16334 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 |||| |||||| |||||||||||||| || |||| |||| || | || | || Sbjct 16333 AGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGACGAG- 16275 Query 132784 CGC-ACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 ||| || || ||||| ||| || ||| | | ||||||| | || ||||||| ||||| Sbjct 16274 CGCGACGGGGAGCGCGTCGCAGACGAACTCCCT-CTCGATGTCCACGGCGTCGGCGACGA 16216 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGC--TTGAACATCAAGCAAGC 132899 | ||| ||||| | | || ||| | |||| | | | | | | | | ||| || Sbjct 16215 TCTCCTGGACGCGTGACTCG-TCGAGC-TTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGC 16158 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||||| || | |||||||| | ||| ||||| |||||| ||| || | ||| || Sbjct 16157 GAAGTCGCAGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGG 16098 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 |||||| ||||| || |||||||| || |||||| ||| ||||| ||||||| || Sbjct 16097 CATGAGTCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAAGAAGATCCC 16038 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||||||| ||||| || || || |||||| |||| ||| | || | ||||||| Sbjct 16037 CTCGACGCAGGCGAAGGCGACGAGCCGCTCGGCGAAGC--GCT-CGCCGCCGTCGATCCA 15981 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGC----ATCGTTTCGATGGCGTTCA 133135 |||| ||||| |||||||| | |||||||| | || ||||||||| | Sbjct 15980 TCGCATGGCCCAGTCGGCCTTGC----GGCGCACGGCGGGGACTGTGTCGATGGCGCGGA 15925 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | ||| ||||| | | || | ||| || |||| || ||| ||||| | Sbjct 15924 AGAGGCGGTCCTTCTCGACGTCGTCGCGGATGTACGTCTCGAGCAGAAGCGAGTACATCT 15865 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 | ||||| | |||||| |||||||| || |||||||| ||| || |||||| | |||| Sbjct 15864 CTGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACCT 15805 Query 133256 GCACTTCTTGAGCGAAACGCTCGA--CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 | || || || ||| || || | || || ||| |||||||| ||| ||| || Sbjct 15804 GAACGTCG-GACATGAAC-CTGGAGGCGAGGTTCTCGAGCACGATGCCATCGGAGGCCGC 15747 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC----TCCC 133369 ||| ||||| |||||||| || ||| |||||||||| | || |||| |||| Sbjct 15746 GAAGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGCGACA-GCGCGGCGTCCC 15688 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||| ||||| ||| ||| |||||||||||||| | ||||| ||||||||| | || | Sbjct 15687 AGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCT 15628 Query 133430 TTTTGTACATACTCC 133444 | ||||| | ||||| Sbjct 15627 TCTTGTAGA-ACTCC 15614 >seq2330 Length=21218 Score = 150 bits (166), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || ||||| | || || ||| || Sbjct 4439 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 4380 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| ||||| ||||| || || |||| Sbjct 4379 TCGGACACCATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGA 4321 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||||||||| | ||| ||||| |||||||| |||| |||||||||| |||||| Sbjct 4320 CCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTA 4261 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| ||||| |||| || || ||||||| || | | |||||| Sbjct 4260 CAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGGC 4209 >seq1402 Length=13741 Score = 145 bits (160), Expect = 8e-30 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || |||||||| | || || ||| || | Sbjct 4378 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGAGCAGC 4437 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | || |||| | || | || | | ||||| ||||| || ||||||| ||| Sbjct 4438 GACACGATCCAGAACG-TCAAGGCGAAGGTGCAGGACAAGGAGGGGAT-CCCGCCGGACC 4495 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||||||||| | ||| ||||| |||||||| |||| |||||| || |||||||| Sbjct 4496 AGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACA 4555 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| |||||||||| ||||||| || | | ||||||| Sbjct 4556 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCC 4606 Score = 123 bits (136), Expect = 2e-23 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| |||||||| || || || | || | |||||||| ||| ||||| Sbjct 8810 AAAGATGCAGATATTCGTGAAGACCCTGAACGGGAGGACCATCACGCTCGTGGTCGACAG 8869 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | |||| || | |||| | || | | |||| ||||| ||||| | ||||||| Sbjct 8870 CTGCGACTCGGTCGAGAACG-TCAAGGCGAGGATCCACGACAGGGAGGGCGT-CCCGCCG 8927 Query 38359 -ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 |||| ||||||||||| | ||| ||||| |||||||| |||| |||||| || |||| Sbjct 8928 CACCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGAC 8987 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| ||||| |||||||||| | ||||| || Sbjct 8988 TACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCG 9028 >seq7833 Length=8852 Score = 127 bits (140), Expect = 2e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || ||||| ||||| ||||| ||| | || |||||| || || Sbjct 8626 ATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCC 8685 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| |||||||| || | ||||| Sbjct 8686 GACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 8745 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || || ||||| || || | |||||||| ||||||||| Sbjct 8746 CAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAAC 8805 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| | | || ||||| | || ||||| Sbjct 8806 ATCCAAAAGG-ATCCACCCTGCACCTTGTCCTGCG 8839 >seq11087 Length=17449 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || |||||||| | || || ||| || Sbjct 11747 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCC 11806 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| ||||| || || || ||| | || Sbjct 11807 TCGGACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGA 11865 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| ||||| ||||| || || | ||||||||| |||||| Sbjct 11866 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTA 11925 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| ||||| | || || || | ||||| || | | |||||| Sbjct 11926 CAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTCCGCGGCGGC 11977 >seq5881 Length=10397 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || ||| | | Sbjct 10377 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTTGAGAGCTCT 10318 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 10317 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 10258 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||||||| |||||||||| Sbjct 10257 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTCGCCGACTACAAC 10198 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || ||||||| || Sbjct 10197 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 10163 >seq10092 Length=22630 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||| ||||| || || ||| | || || ||| | | Sbjct 17494 AATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTGGAGGTTGAGAGCTC 17553 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| || || ||||| || ||| | |||| Sbjct 17554 AGACACCATCGACAACG-TGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACC 17612 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | ||||| | ||| || || |||||||| || | |||||||| |||||||| Sbjct 17613 AGCAGAGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTACA 17672 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| || ||||| | || || || |||||||| || Sbjct 17673 ACATTCAGAAGGAGTCTACCCTACACTTGGTGCTCCG 17709 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||| ||| | || || ||| || | Sbjct 16812 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCG 16871 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || |||| ||||| |||||||| || | ||||| Sbjct 16872 GATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 16931 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || || | |||||| || ||||||||| Sbjct 16932 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGGCGCACGCTTGCTGACTACAAC 16991 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| | || || ||| | || || || Sbjct 16992 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTCCG 17026 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||| || | || || ||| | || Sbjct 17723 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 17782 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || |||| ||||| || || |||||| | ||||| Sbjct 17783 GATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAG 17842 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | || |||||| |||||||||| Sbjct 17843 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAAC 17902 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || || ||||||| || Sbjct 17903 ATTCAGAAGGAGTCTACCCTCCACCTGGTGCTCCG 17937 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || ||||| ||||| || | || || ||| | | Sbjct 17266 AATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCATC 17325 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | || | || |||| ||||| ||||| |||||| | |||| Sbjct 17326 AGACACGATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACC 17384 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| || ||||| |||||||| || | | |||||| ||||||| Sbjct 17385 AGCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACA 17444 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| | || || || | || ||||| Sbjct 17445 ACATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCG 17481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| || |||||| | || || ||| | | Sbjct 17040 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCT 17099 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| |||| | ||| |||| ||||| ||||| |||||| | ||||| Sbjct 17100 GATACTATTGACAACG-TTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCC-CGGACCA 17157 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| ||||| || || | | ||||| |||||||| Sbjct 17158 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAA 17217 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 17218 CATCCAGAAGGA 17229 >seq18227 Length=45862 Score = 105 bits (116), Expect = 7e-18 Identities = 99/125 (79%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||||| |||| ||||| ||||| | ||| || || |||||||| |||| ||||||| Sbjct 21748 TCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCC 21807 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469 | ||||||||||||||| ||||| |||||||||| ||||||| || | | |||| Sbjct 21808 TGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCG 21867 Query 38470 GCCGC 38474 || || Sbjct 21868 GCAGC 21872 Score = 100 bits (110), Expect = 3e-16 Identities = 98/125 (78%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||| ||| |||| ||||| ||||| | |||||| || |||||||| || | ||||||| Sbjct 17040 TCCCTCCGGACCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTGGAGGATGGCCGCACCC 17099 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469 | ||||||||||||||| ||||| |||||||||| ||||||| || | | |||| Sbjct 17100 TGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCG 17159 Query 38470 GCCGC 38474 || || Sbjct 17160 GCAGC 17164 >seq10216 Length=110639 Score = 102 bits (112), Expect = 8e-17 Identities = 103/132 (78%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 38344 AGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 ||||| |||||||| | || ||||||||||| | |||||| || |||||||| |||| Sbjct 101893 AGGGA--TCCCGCCGGATCAGCAGCGGCTCATCTTCGCGGGGAAGCAGCTGGAAGACGGC 101836 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 ||||| || ||||||||||||||| ||||| ||||||| || ||||||| || | Sbjct 101835 CGCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGCCTC 101776 Query 38463 AGAGGCGGCCGC 38474 | |||||| || Sbjct 101775 CGCGGCGGCGGC 101764 >seq17239 Length=15006 Score = 100 bits (110), Expect = 3e-16 Identities = 167/240 (70%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 38233 TCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACG 38292 ||||| | | ||||| || || || ||||| || || ||||| |||||||| | || | Sbjct 3788 TCTTTCATCAGATGCAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACCCTTGAGG 3729 Query 38293 TCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352 | ||| | |||||| | | | | || | || |||| || || ||||| |||| Sbjct 3728 TGGAGTCATCCGACACAATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTC 3669 Query 38353 CCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCA 38412 || | ||||| ||||| || || | || ||||| ||||| || || | |||||||| Sbjct 3668 CCCCGGACCAGCAGCG-CTTATCTTTGCCGGCAAGCAGCTCGAGGAAGGACGCACCCTTG 3610 Query 38413 ACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||| || ||||| |||| || ||| | || || ||| | | || |||| Sbjct 3609 CTGACTACAACATTCAGAAGGAGTCGACCCTCCATCTTGTCCTCCGTCTCCGTGGTGGCC 3550 >seq10866 Length=43988 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || | || ||||||||||| ||| | || || ||| | | Sbjct 18607 AATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCCTGGAGGTTGAGTCGTC 18548 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| ||| || | ||||| ||| | |||||| | || | Sbjct 18547 AGACACAATTGACAACG-TAAAAGCAAAGATTCAGGACAAGGAGAGCATTCCCCCGGATC 18489 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| ||||| || || | |||||| | || |||| Sbjct 18488 AGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGATTACA 18429 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| | || |||| ||||||| ||| | | || |||| Sbjct 18428 ACATCCAGAAGGAGTCCACCTTGCACCTGGTGCTCCGTCTCCGCGGTGGCC 18378 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||| ||| | || || ||| || | Sbjct 19063 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTAGAGGTTGAGTCCTCT 19004 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 | || | || || | | || | || || | ||||| ||||||||||| | ||||| Sbjct 19003 GGCACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGAATTCCACCTGACCA 18945 Query 38363 ACAGCGGCTCATTTACGCGGGCAAA-CAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| ||||| | ||||||||| || || || |||| ||||||||| || |||| Sbjct 18944 GCAGCGCCTCATCTTTGCGGGCAAAGCAACTTGAGGACGGACGCACCCTCGCAGATTACA 18885 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || || || | || || || | ||||| | |||| || ||| Sbjct 18884 ACATTCAGAAAGAGTCCACCCTTCACCTTGTGCTTAGGCTGAGGGGAGGC 18835 >seq6022 Length=17457517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/123 (76%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||||| |||| ||||| ||||| | ||| || || |||||||| || | ||||| | Sbjct 7780040 TCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGAGGATGGCCGCACGC 7780099 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469 | ||||||||||||||| ||||| | ||||| || ||||||| || | | |||| Sbjct 7780100 TGGCCGACTACAACATCCAGAAGGAGTCCACGCTTCACCTGGTGCTTCGCCTACGCGGCG 7780159 Query 38470 GCC 38472 ||| Sbjct 7780160 GCC 7780162 >seq18333 Length=36510 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||||| | |||| ||||| ||||| | |||||| || ||||| || || | ||||||| Sbjct 2290 TCCCGCTGGACCAGCAGCGTCTCATCTTCGCGGGGAAGCAGCTCGAGGATGGCCGCACCC 2349 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 | |||||||||||| || ||||| ||||||| || ||||||| || Sbjct 2350 TGGCCGACTACAACATTCAGAAGGAGTCGACGCTTCACCTGGTGCTCCG 2398 >seq17888 Length=15954 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/97 (79%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 38351 TCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||| ||| |||| ||||| ||||| | ||| ||||| |||||||| || | ||||||| Sbjct 11826 TCCCTCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCC 11885 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 | ||||||||||||||| ||||| | ||||| || Sbjct 11886 TGGCCGACTACAACATCCAGAAGGAGTCCACGCTCCA 11922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500012750956160