Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq13224 363 2e-94
seq12822 363 2e-94
seq2925 163 4e-34
seq1954 154 2e-31
seq6022 152 7e-31
seq2930 149 9e-30
seq2929 149 9e-30
seq16003 145 1e-28
seq607 140 5e-27
seq2940 136 6e-26
seq10205 109 8e-18
seq18227 89.7 7e-12
>seq13224
Length=26385
Score = 363 bits (402), Expect = 2e-94
Identities = 422/562 (75%), Gaps = 14/562 (2%)
Strand=Plus/Plus
Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812
||||||| ||| | |||| || ||| ||||| | ||| || ||||| | ||| || ||
Sbjct 15586 TGTTCCCGATCAGGTACCCGCAGATCTGGGAGTTCTAC-AAGAAGGCGGTGGCGTCGTTC 15644
Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGC 1455869
||||| || |||||||| |||||| ||||||| || |||||||| | ||||
Sbjct 15645 TGGACGGCGGAGGAGGTGGACCTCTCCGCCGACGCGCGCCACTGGGACGCCGCGCTGTCG 15704
Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929
|||||||||||| ||| || ||||| |||||||| || ||| ||| |||||||||
Sbjct 15705 CCCGACGAGCGCCACTTCGTCTCCCACGTGCTCGCCTTCTT-CGCGGCCTCCGATGGCAT 15763
Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989
|||| ||||||||| ||| | | || ||| || || || | | ||||| ||
Sbjct 15764 CGTGCTCGAGAACCTCGCCTCCAGGTTCATGTCCGACGTTCAGGTCGCCGAGGCTCGCGC 15823
Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049
|| ||||| ||||||||||||||||| ||||||||||| || | |||||||| ||| |
Sbjct 15824 CTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCAGAGATGTACTCGCTTCTGCT 15883
Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109
||| || ||| || ||| ||||||||||||| |||||| |||||||||||||| ||
Sbjct 15884 CGAGACGTACATCCGCGACGACGTCGAGAAGGACCGCCTCTTCCGCGCCATCGACACAGT 15943
Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169
|| | ||| | |||||||||||||| ||| |||||| || ||| |||
Sbjct 15944 CCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATC------GACGGCGGCGA 15997
Query 1456170 -CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227
| ||| |||||||||||||||| ||| ||| |||||||||| ||||| ||||||||
Sbjct 15998 GCGCTTCGCCGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTC 16057
Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287
|||||||||||||| ||||||||||||||||| |||||| |||| | || ||| ||
Sbjct 16058 ATTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGACTCATG-CCGGGCCTCACCTTCTCCA 16116
Query 1456288 ACGAATTTATCAGTCGCGACGA 1456309
|||| | ||| ||||||||
Sbjct 16117 ACGAGCTCATCTCCCGCGACGA 16138
Score = 196 bits (216), Expect = 7e-44
Identities = 243/323 (75%), Gaps = 10/323 (3%)
Strand=Plus/Plus
Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGAC 1456506
||| | ||||| ||||| ||||| || |||||| | ||| | ||||| || |||
Sbjct 16140 GGTCTCCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAG 16199
Query 1456507 CGACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGA 1456566
||| | ||| | ||||| ||| ||| ||||| || ||||||| ||||| ||| ||||
Sbjct 16200 TCACGCGTCCAGG-AGATCGTCGCCGACGCCGTGGACATCGAGAGGGAGTTCGTCTGCGA 16258
Query 1456567 GTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAAT 1456626
|||| || || |||||| |||| ||||||| | ||||||| |||||||||| || |
Sbjct 16259 CGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGA-GCTCATGAGCCAGTACATCGAGT 16317
Query 1456627 TTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCC 1456684
| ||||||||||| |||||| ||||||||| ||| ||||| ||| ||| |||
Sbjct 16318 TC-GTCGCCGACCGGCTGCTCATGGCGCTCGGGTGCA-AGAAGATGTACA--ACGTCGCC 16373
Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744
||||||||| ||||||||| | ||||| || |||||||||||||||| ||||||
Sbjct 16374 AACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAG 16433
Query 1456745 CGCGT-GGCGAGTACGCCAAGGC 1456766
||||| ||||| ||| |||||
Sbjct 16434 CGCGTCGGCGACTACCAGAAGGC 16456
>seq12822
Length=10151
Score = 363 bits (402), Expect = 2e-94
Identities = 422/562 (75%), Gaps = 14/562 (2%)
Strand=Plus/Minus
Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812
||||||| ||| | |||| || ||| ||||| | ||| || ||||| | ||| || ||
Sbjct 2979 TGTTCCCGATCAGGTACCCGCAGATCTGGGAGTTCTAC-AAGAAGGCGGTGGCGTCGTTC 2921
Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGC 1455869
||||| || |||||||| |||||| ||||||| || |||||||| | |||| |
Sbjct 2920 TGGACGGCGGAGGAGGTGGACCTCTCCGCCGACGCGCGCCACTGGGACGCCGCGCTGTCC 2861
Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929
|||||||||||| |||||| ||||| |||||||| || ||||||| ||| |||||
Sbjct 2860 CCCGACGAGCGCCACTTCATCTCCCACGTGCTCGCCTTCTT-CGCCGCCTCCGACGGCAT 2802
Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989
|||| ||||||||| ||| | | || ||| || || || | | ||||| ||
Sbjct 2801 CGTGCTCGAGAACCTCGCCTCCAGGTTCATGTCCGACGTGCAGGTCGCCGAGGCGCGCGC 2742
Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049
|| ||||| ||||||||||||||||| ||||||||||| || | |||||||| ||| |
Sbjct 2741 CTTCTACGGATTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTGCTGCT 2682
Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109
||| |||||| || ||| | ||||||||||| || || |||||||||||||| ||
Sbjct 2681 CGAGACCTACATCCGCGACGGCGCCGAGAAGGACCGGCTGTTCCGCGCCATCGACACCGT 2622
Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169
||| | ||| | |||||||||||||| ||| |||||| || ||| |||
Sbjct 2621 CCCGGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATC------GACGGCGGCGA 2568
Query 1456170 -CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227
| ||| |||||||| ||||||| ||| ||| |||||||||| ||||| |||||||||
Sbjct 2567 GCGCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTC 2508
Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287
|||||||||||||| |||||||||||||| || |||||| |||| | || ||| ||
Sbjct 2507 CTTCTGCGCCATCTTCTGGCTCAAGAAGCGGGGGCTCATG-CCGGGCCTCACCTTCTCCA 2449
Query 1456288 ACGAATTTATCAGTCGCGACGA 1456309
|||| | ||| ||||||||
Sbjct 2448 ACGAGCTCATCTCCCGCGACGA 2427
Score = 197 bits (218), Expect = 2e-44
Identities = 246/327 (75%), Gaps = 10/327 (3%)
Strand=Plus/Minus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACCGAC 1456510
||||||| ||||| ||||| || |||||| | ||| | ||||| || ||| |
Sbjct 2421 TGCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAGGCGC 2362
Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570
| | || | ||||| ||| ||| |||||||| ||||||| ||||| ||| |||| ||
Sbjct 2361 GCGTCCGCG-AGATCGTCGCCGACGCCGTCGACATCGAGAGGGAGTTCGTCTGCGACGCG 2303
Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630
|| || || |||||| |||||||||||| | | |||||| |||||||||| ||| || |
Sbjct 2302 CTCCCCGTCGCGCTCGTCGGCATGAACGGCGAC-CTCATGAGCCAGTACATCGAA-TTCG 2245
Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGC--GGAGAAGCACTACCGGACGGCCAACC 1456688
||||||||||||| ||| ||| ||||||||| | ||| | || || | | |||||||
Sbjct 2244 TCGCCGACCGCCTCCTCATGGCACTCGGCTGCAAGAAGATGTACAAC--GTC-GCCAACC 2188
Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748
| ||| ||||||||| | ||||| || |||||||||||||||| |||||| ||||
Sbjct 2187 CCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCG 2128
Query 1456749 T-GGCGAGTACGCCAAGGCCGGCGTCA 1456774
| ||||| ||| ||||| |||||
Sbjct 2127 TCGGCGACTACCAGAAGGCGTCCGTCA 2101
>seq2925
Length=43826
Score = 163 bits (180), Expect = 4e-34
Identities = 178/232 (77%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||| ||| |||| ||
Sbjct 1873 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 1926
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||||||||| |||| ||| | |||||||||
Sbjct 1927 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCCGAGGCCGCC 1986
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || |||| ||||||| ||| ||| | | ||||||||||||||| ||||
Sbjct 1987 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTC 2046
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 2047 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 2098
>seq1954
Length=18788
Score = 154 bits (170), Expect = 2e-31
Identities = 181/236 (77%), Gaps = 14/236 (6%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||| || |||||||||||||| || | | || |||| ||| |||| ||
Sbjct 11083 ATCTTCAAGGTCCTGAAGCAGGTGCACCCG-GA--CATCGG--CATC-TCCTCCAAGGCC 11030
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACC-GCATCGGCACCGAGGCCGG 725029
||||||||||||||||| || |||||||||| |||| || | ||| |||||||
Sbjct 11029 ATGTCGATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTTGCGCAG-GAGGCCGC 10971
Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGC 725086
||||| || |||| ||||||| || | |||| ||| ||||||||| ||||| |
Sbjct 10970 CCGCCTCGCCCGCTACAACAAG---AAGCCCATCGCCACCTCCCGCGAGATCTAGACCTC 10914
Query 725087 CGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| ||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 10913 CGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 10858
>seq6022
Length=17457517
Score = 152 bits (168), Expect = 7e-31
Identities = 177/233 (76%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||| || |||||||||||||| || | | || |||||||| | ||
Sbjct 8772945 ATCTTCAAGGTCCTGAAGCAGGTGCACCCG-GA--CATCGGAATCTCCTCCAA---GGCC 8772998
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029
||||||||||||||||| || |||||||||| |||| ||| ||| |||||||
Sbjct 8772999 ATGTCGATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCGCAG-GAGGCCGC 8773057
Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089
||||| || |||| ||||||| ||| ||| | | ||||||||||||||| ||||
Sbjct 8773058 CCGCCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGT 8773117
Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| ||||||||| |||||||||||||
Sbjct 8773118 CCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTTTCCGAGGGCACCA 8773170
>seq2930
Length=34301
Score = 149 bits (164), Expect = 9e-30
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||| ||| |||| ||
Sbjct 30550 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 30497
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||||||||| |||| ||| |||| |||
Sbjct 30496 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCTGGCGAGTCCGCC 30437
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||||| ||||||| ||| ||| | | || |||||||||||| ||||
Sbjct 30436 AAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCACGGGAGATCCAGACCTCCGTC 30377
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 30376 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 30325
>seq2929
Length=26792
Score = 149 bits (164), Expect = 9e-30
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||| ||| |||| ||
Sbjct 13630 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 13577
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||||||||| |||| ||| | ||| |||
Sbjct 13576 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGTCCGCC 13517
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || |||| ||||||| ||||||| | | || |||||||||||| ||||
Sbjct 13516 AAGCTCGCCCGCTACAACAAGAAGCCCACGATCACCTCCCGGGAGATCCAGACCTCCGTC 13457
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 13456 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 13405
Score = 149 bits (164), Expect = 9e-30
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||| ||| |||| ||
Sbjct 25739 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 25686
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||||||||| |||| ||| | ||| |||
Sbjct 25685 ATGTCTATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGAGAGTCCGCC 25626
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || |||| ||||||| ||| ||| | | || |||||||||||||||||
Sbjct 25625 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCGCCGTC 25566
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 25565 CGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 25514
Score = 145 bits (160), Expect = 1e-28
Identities = 174/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||||||| || ||
Sbjct 7026 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGGCATCTCCTCCAA--AG-CC 6973
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||||||||| |||| ||| | ||| |||
Sbjct 6972 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGTCCGCC 6913
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || |||| ||||||| ||||||| | | || |||||||||||||||||
Sbjct 6912 AAGCTCGCCCGCTACAACAAGAAGCCCACGATCACCTCCCGGGAGATCCAGACCGCCGTC 6853
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | ||||| || |||| |||||||||||||||||||||||
Sbjct 6852 CGCCTCGTCCTCCCAGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 6801
>seq16003
Length=111107
Score = 145 bits (160), Expect = 1e-28
Identities = 173/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||||||||| || | | ||| |||||||| | ||
Sbjct 22181 ATCTTCAAGGTGCTCAAGCAGGTGCACCCG-GA--CATCGGGATCTCCTCCAA---GGCC 22234
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| |||||||||| |||| ||| | ||||||||
Sbjct 22235 ATGTCAATCATGAACTCGTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCC 22294
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || | | ||||||| ||| ||| | | | |||||||||||| ||||
Sbjct 22295 AAGCTCGCCAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTC 22354
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 22355 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 22406
>seq607
Length=27496
Score = 140 bits (154), Expect = 5e-27
Identities = 168/227 (74%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
|||||| |||||||||||||| ||| | || || || ||||| | |||||||
Sbjct 14568 CAAGGTCCTCAAGCAGGTGCATCCCGATATCG---GGATCTCGTCCAA---GGCCATGTC 14515
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
||||||||||||||| ||||||| || |||| ||| | ||||||| || ||
Sbjct 14514 GATCATGAACTCGTTCATCAACGATATCTTCGAGAAGCTCGCCCAGGAGGCCGCCCGTCT 14455
Query 725036 GGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCT 725095
|| |||| ||||||| || ||| | | ||||||||||||||| | ||||||||
Sbjct 14454 CGCCCGCTACAACAAGAAGCCGACCATCACCTCCCGCGAGATCCAGACCTCGGTGCGCCT 14395
Query 725096 GATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | | |||||| || |||| |||||||||||| ||||||||||
Sbjct 14394 CGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 14348
>seq2940
Length=12227
Score = 136 bits (150), Expect = 6e-26
Identities = 172/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| || | | || |||| ||| |||| ||
Sbjct 151 ATCTTCAAGGTGCTCAAGCAGGTTCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 204
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || |||| ||||| |||| ||| | ||| |||
Sbjct 205 ATGTCCATCATGAACTCCTTCATCAATGACATCTTCGAGAAGCTCGCCGGAGAGTCCGCC 264
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || |||| ||||||| ||| ||| | | || |||||||||||| ||||
Sbjct 265 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTC 324
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| || | | |||||| || |||| |||||||||||| ||||||||||
Sbjct 325 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 376
>seq10205
Length=97020
Score = 109 bits (120), Expect = 8e-18
Identities = 164/231 (71%), Gaps = 18/231 (8%)
Strand=Plus/Plus
Query 724913 CTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCAT 724972
|| ||||||||||||||||||||| | || | |||||||| | ||||
Sbjct 76462 CTTCAAGGTGCTCAAGCAGGTGCATC----AATC---------TCCTCCAA---GGCCAT 76505
Query 724973 GTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGGTC 725031
||| |||||||| || || |||||||||| |||| ||| ||| |||||||
Sbjct 76506 GTCCATCATGAATTCCTTCATCAACGACATTTTCGAGAAGCTCGAGCAG-GAGGCCGCCA 76564
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
| || || | | ||||||| ||| ||| | | || |||||||||||| | || |
Sbjct 76565 GGCTTGCCAGGTACAACAAGAAGCCCACAATCACCTCCCGTGAGATCCAGACCTCTGTTC 76624
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || || | | |||||| || |||| |||||||||||||||||||||||
Sbjct 76625 GTCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 76675
>seq18227
Length=45862
Score = 89.7 bits (98), Expect = 7e-12
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 799188 GCCGCCGCGCAGCCTGAGCACCAGGTGCATCGTCGCATCGGCGCGGATGGCATAGTCGAC 799247
||||||||| || | |||||||||||||| ||||| || ||||| |||||| |
Sbjct 21869 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 21810
Query 799248 CAGGCGGCGACTGTCTTCCAACTGTTGGCCCGCATAAATGAGGCGCTGCTGGTCGGGTGG 799307
|||| ||| | ||| |||| ||| | || || | ||||||||||||||||| || ||
Sbjct 21809 CAGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 21750
Query 799308 TATTCCTGT 799316
|| |||||
Sbjct 21749 GATACCTGT 21741
Score = 86.0 bits (94), Expect = 9e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 799188 GCCGCCGCGCAGCCTGAGCACCAGGTGCATCGTCGCATCGGCGCGGATGGCATAGTCGAC 799247
||||||||| || | |||||||||||||| ||||| || ||||| |||||| |
Sbjct 17161 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 17102
Query 799248 CAGGCGGCGACTGTCTTCCAACTGTTGGCCCGCATAAATGAGGCGCTGCTGGTCGGGTGG 799307
|||| ||| | || |||| ||| | ||||| | ||||||||||||||||| || ||
Sbjct 17101 CAGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGG 17042
Query 799308 TATTCCT 799314
|| |||
Sbjct 17041 GATACCT 17035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7175342129399038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |