Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7832 212 1e-49
seq10092 197 3e-45
seq7833 190 5e-43
seq5881 188 2e-42
seq11087 185 2e-41
seq10866 176 1e-38
seq2330 176 1e-38
seq17240 174 4e-38
seq17239 150 4e-31
seq1402 143 6e-29
seq18466 109 1e-18
seq17888 107 4e-18
seq6022 102 2e-16
seq18333 98.7 2e-15
seq18227 98.7 2e-15
seq12013 96.9 8e-15
seq10216 86.0 1e-11
>seq7832
Length=9206
Score = 212 bits (234), Expect = 1e-49
Identities = 174/212 (82%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || ||||||||||| || |||||||| | |||||
Sbjct 241 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCC 182
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||| |||
Sbjct 181 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 122
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||||||| |||||||| |||||||| |||
Sbjct 121 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTC 62
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 61 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 30
>seq10092
Length=22630
Score = 197 bits (218), Expect = 3e-45
Identities = 171/212 (81%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || || ||||| || || || ||||| | ||||||
Sbjct 17934 AGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 17875
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| ||||| || ||||| || |||| ||||||||||||
Sbjct 17874 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 17815
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || |||||||| || ||||| |||||||| ||||| || |||
Sbjct 17814 TGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTC 17755
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | ||||||
Sbjct 17754 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 17723
Score = 190 bits (210), Expect = 5e-43
Identities = 170/213 (80%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| |||||||| || |||||||| || || || |||||||| |||||
Sbjct 17478 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCC 17419
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || || ||||| || || ||||| || |||| || |||||||||
Sbjct 17418 TCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 17359
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||| ||||| || |||||||| || || || |||
Sbjct 17358 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTC 17299
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || ||||| ||||| | |||||||
Sbjct 17298 TTGCCAGTAAGGGTCTTCACAAAGATCTGCATT 17266
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||| || || |||||||| || || ||||| || | ||||||
Sbjct 17023 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCT 16964
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || || || ||||| || || | ||| |||||||||
Sbjct 16963 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 16904
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || ||||| || ||| |||||||| || || || |||
Sbjct 16903 TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTC 16844
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| ||||| | ||||||
Sbjct 16843 TTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 16812
Score = 176 bits (194), Expect = 1e-38
Identities = 167/212 (79%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| |||||||| || |||||||| || || ||||||||||| |||||
Sbjct 17250 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 17191
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || || || ||||| || |||| || |||||||||
Sbjct 17190 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGG-GGAATCCCCTCCTTGTCC 17132
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| || || || ||||| |||||||| || ||||| |||
Sbjct 17131 TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTC 17072
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | |||||
Sbjct 17071 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 17040
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| || || |||||||| | |||||
Sbjct 17706 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCC 17647
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| || | || ||||| || || | || ||||| |||
Sbjct 17646 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 17587
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||| ||||| |||||||| || || || |||
Sbjct 17586 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTC 17527
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || ||||||||||| || || | |||||||
Sbjct 17526 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 17494
>seq7833
Length=8852
Score = 190 bits (210), Expect = 5e-43
Identities = 177/225 (79%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| |||||| | ||||||||||| | |||||||| || ||||||||||||||||| ||
Sbjct 8622 TCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAG 8563
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct 8562 AGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCTGGAGGGAT 8503
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||||||||| ||||| ||||| || || || || || ||| ||||||||
Sbjct 8502 GCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTC 8443
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| ||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 8442 CAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 8398
Score = 163 bits (180), Expect = 7e-35
Identities = 164/212 (77%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || ||||||||||| || || |||||||| | |||||
Sbjct 8836 AGGACAAGGTGCAGGGTGGA-TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCC 8778
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || || || ||||| || || | ||| |||||||||
Sbjct 8777 TCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 8718
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| ||| || ||||| || || || |||
Sbjct 8717 TGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTC 8658
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | |||||
Sbjct 8657 TTGCCGGTGAGGGTCTTCACGAATATTTGCAT 8626
>seq5881
Length=10397
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || |||||||| || |||||||| || || || ||||| | ||||||
Sbjct 10166 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCC 10225
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||| || |||| || |||||||||
Sbjct 10226 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 10285
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || |||||||||||||| |||||||| | |||||| |||
Sbjct 10286 TGGATCTTGGCCTTCACATTATCAATGGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTC 10345
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 10346 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 10377
>seq11087
Length=17449
Score = 185 bits (204), Expect = 2e-41
Identities = 170/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || |||||||| || |||||||| || || || ||||| | |||||
Sbjct 11961 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 11902
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| || || | ||||||||||||
Sbjct 11901 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 11842
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||| ||| || ||||| || ||||| |||
Sbjct 11841 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 11782
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || ||||| || || | |||||| ||
Sbjct 11781 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 11747
>seq10866
Length=43988
Score = 176 bits (194), Expect = 1e-38
Identities = 171/219 (78%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| || || ||||||||||| ||||||||||| || ||||| ||||| || ||||| | |
Sbjct 18845 AGCCTAAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGT 18904
Query 210957 CCATCTTCCAGCTGCTT-GCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015
|| || || || ||||| ||| || ||||| ||||| || |||||||| |||| ||| ||
Sbjct 18905 CCGTCCTCAAGTTGCTTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATTCCCTC 18964
Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075
||||||||| ||||| || || || || || ||| ||||| |||||||| || ||
Sbjct 18965 CTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGCCAGAGGACTCAACCTCTAGGGT 19024
Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| ||||| ||||| | ||||||
Sbjct 19025 TATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 19063
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| || || || |||||||| || ||||| || ||||| || || || || |||| | |
Sbjct 18617 AGCCTGAGCACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCAGGGAGCGT 18676
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || ||||||||||| |||||||| | ||| || ||||| | || | || |||
Sbjct 18677 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCC 18736
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||| ||||| ||||| || ||||| || ||||| || ||||| || ||
Sbjct 18737 TTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTA 18796
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || ||||| ||||| | ||||||
Sbjct 18797 ATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 18834
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| | |||||||| || |||||||| ||||| || | ||| | |||||
Sbjct 18395 AGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCCATCC 18454
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| ||||| || || || || |||| | |||||||||
Sbjct 18455 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCC 18514
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| ||| ||||| || || ||||| || |||||||| || || || ||
Sbjct 18515 TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTT 18574
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || | ||||| ||||| | ||||||
Sbjct 18575 TTGCCGGTCAATGTCTTGACAAAGATTTGCATT 18607
>seq2330
Length=21218
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || || ||||| | || ||
Sbjct 4225 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 4284
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||| || || | || |||||||||
Sbjct 4285 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 4344
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||||||||| ||| || ||||| || |||||||||
Sbjct 4345 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 4404
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || ||||| || || | |||||| ||
Sbjct 4405 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 4439
>seq17240
Length=28509
Score = 174 bits (192), Expect = 4e-38
Identities = 170/220 (77%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||||||||| || || || || || |||||| | | ||| ||
Sbjct 21431 AGGACAAGATGGAGGGTGGACTCTTTCTGAATTTTGTAGTCAGCAAGGTTGCGTCCTTCC 21490
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| || ||||| ||||||| || |||||||||
Sbjct 21491 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 21550
Query 211023 TGGATCTTT--------TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074
||||||||| || ||||| || ||||||||||| || || |||||||| |
Sbjct 21551 TGGATCTTTACCTTCACTGCTTCACATTGTCGATGGTGTCGGATGACTCCACCTCGAGGG 21610
Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| | ||| || || |||||||| ||||| | ||||||
Sbjct 21611 TGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 21650
>seq17239
Length=15006
Score = 150 bits (166), Expect = 4e-31
Identities = 165/218 (76%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || || ||||| || || ||||| || || |||||||| | ||| ||
Sbjct 3567 AGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCC 3626
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || |||||||| || || ||||| || |||| || ||||| |||
Sbjct 3627 TCGAGCTGCTTGCCGGCAAAGATAAG-CGCTGCTGGTCCGGGGGAATGCCCTCCTTATCC 3685
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || ||||| | |
Sbjct 3686 TGGATCTTCGCCTTCACATTGTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGAC 3745
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120
|| || || || || || ||||| | |||||| | |||
Sbjct 3746 TTGCCGGTCAGGGTTTTCACAAAGATCTGCATCTGATG 3783
Score = 105 bits (116), Expect = 2e-17
Identities = 167/233 (72%), Gaps = 16/233 (7%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA---TCT 210962
|| |||||||| |||||||| | ||||||| || || || ||||| || || ||
Sbjct 7199 ACGAGGTGAAGCGTGGACTCGTCGTGGATGTCGTAGTCGGCGAGGGTGCTGCCGCCGTCG 7258
Query 210963 TCCAGCTGCTTGC---CTGCGAAGATA------AGGCGTTGTTGGTCAGGAG-GAACTCC 211012
|| |||||||||| | ||| ||| ||| | || ||||| |||| | | ||
Sbjct 7259 TCGAGCTGCTTGCTGCCGGCGGAGACGTCGACGAGGTGCTGCTGGTC-GGAGCGGATGCC 7317
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA-GCTTTCAACCTCGA 211071
| |||||||||||||||| ||||||| ||||| ||||| || | | || |||||||
Sbjct 7318 TACCTTGTCCTGGATCTTCGCCTTCACGTCGTCGATCGTGTCGGATGGTCTC-ACCTCGA 7376
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTA 211124
| ||||| || | || || |||||||| || | | ||||||||| || |||
Sbjct 7377 GGGTGATGGTGATGCCGGTCAGAGTCTTCACGATGATCTGCATTTTCTGATTA 7429
>seq1402
Length=13741
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || || || || | || ||
Sbjct 4589 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCC 4530
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||| || || | || |||||||||
Sbjct 4529 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 4470
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| | ||| || ||||| | ||| ||||| ||| || ||||| || ||||| |||
Sbjct 4469 TGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTC 4410
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | ||||||
Sbjct 4409 TTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 4378
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || || || || | || ||
Sbjct 9025 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCC 8966
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || |||| || || || || ||| ||||
Sbjct 8965 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCG 8906
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||| | || ||||| |||| | ||| |||| || ||| |||| ||||| |||
Sbjct 8905 TGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTC 8846
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
| || | || ||||| || || | |||||| ||
Sbjct 8845 CTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 8811
>seq18466
Length=31617
Score = 109 bits (120), Expect = 1e-18
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| || ||||| | ||||||||| ||||| || || ||||| || || || || || |
Sbjct 14441 AGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGC 14382
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|||||||||||||||||||| ||||| || | || ||||| || ||||| | ||||||
Sbjct 14381 CCATCTTCCAGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCC 14322
Query 211017 TTGTCCTG 211024
||||||||
Sbjct 14321 TTGTCCTG 14314
>seq17888
Length=15954
Score = 107 bits (118), Expect = 4e-18
Identities = 86/104 (83%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || |||||||| || |||||||| || || || ||||| | |||||
Sbjct 11931 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 11872
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
|||||||||||||| |||||||| ||||| || ||||| |||||
Sbjct 11871 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 11828
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| || || || ||||||||||| ||| || ||||||
Sbjct 11724 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 11665
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| ||||| ||||| || ||||| || || | |||||| ||
Sbjct 11664 AGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 11618
>seq6022
Length=17457517
Score = 102 bits (112), Expect = 2e-16
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || || ||||| ||||| || |||||||| || |||||||| || || || |||||
Sbjct 6547284 ACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 6547343
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||| || ||||||||||| || |||||||| || || || ||||| || || | |||
Sbjct 6547344 GCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCC 6547403
Query 211013 TTCC 211016
| ||
Sbjct 6547404 TGCC 6547407
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| |||||||| || |||||||| || || || || || | |||||
Sbjct 7780145 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 7780086
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
||||||||||| || |||||||| ||||| || ||||| || ||
Sbjct 7780085 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 7780042
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||||||||| || || || ||||||||||| ||| || ||||||
Sbjct 6547493 CCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTCCACCTCG 6547552
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| ||||| || || || ||||| || || | |||||| ||
Sbjct 6547553 AGGGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATCTT 6547599
>seq18333
Length=36510
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| || ||||| ||||||||||| ||| || |||||
Sbjct 1309 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 1250
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||||||| || ||||| ||||| || || | |||||| ||
Sbjct 1249 AGCGTGATCGTCTTCCCGGTGAGCGTCTTCACGAAGATCTGCATCTT 1203
>seq18227
Length=45862
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| || ||||| ||||||||||| ||| || |||||
Sbjct 20916 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 20857
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||||||| ||||| || ||||| || || | |||||| ||
Sbjct 20856 AGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 20810
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| || ||||| ||||||||||| ||| || |||||
Sbjct 16419 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGATGCTCTCCACCTCC 16360
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||| ||| ||||| || ||||| || || | |||||| ||
Sbjct 16359 AGCGTGATCGACTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 16313
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || || ||||| | |||||
Sbjct 17145 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 17086
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
||||||||||| || |||||||| ||||| || ||||| |||||
Sbjct 17085 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGG 17042
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || || ||||| | || ||
Sbjct 21853 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCA 21794
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
||||||||||| || |||||||| ||||| || ||||| || ||
Sbjct 21793 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 21750
>seq12013
Length=80356
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| || ||||| | || || || |||||||| || ||||| ||||| || | || | |
Sbjct 64471 AGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCTAATGTACGT 64412
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||||||||| ||||| |||||||| || || | ||| ||||| || |||| || ||
Sbjct 64411 CCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTCT 64352
Query 211017 TTGTCCTG 211024
||||||||
Sbjct 64351 TTGTCCTG 64344
>seq10216
Length=110639
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
||||||||||| |||||||| || ||||| || |||||||| ||| || |||||
Sbjct 103072 CCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGCTGCTCTCGACCTCC 103131
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||||| ||| ||||| || ||||| || || | |||||| ||
Sbjct 103132 AGGGTGATCGACTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 103178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158771812995635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |