Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=27098305 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||| | || | ||||||||| |||||||| ||||| || || | Sbjct 16356823 ACATGAGCAATCATGTATGTCAGAAGAGAATATGATGCAATGTTGAATGGAACACCAAGT 16356764 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||||||||| || | |||||||| || || || |||| || || || |||||||| Sbjct 16356763 CCCATATCAGCAGAGCGTTGATACATCTGGCACGATAGCTCCCCGCTCTCA-ACATAAAA 16356705 Query 101875 TTG 101877 || Sbjct 16356704 CTG 16356702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251147167012