Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 seq9 118 9e-22 seq7 109 5e-19 seq11 107 2e-18 seq5 102 7e-17 seq1 96.9 3e-15 seq12 89.7 4e-13 seq6 84.2 2e-11 >seq8 Length=30429317 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||||| ||||||||||| || ||||| || || || Sbjct 9002907 CCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 9002966 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || | ||||| ||||| ||||| ||| | || || | |||||| ||| ||| Sbjct 9002967 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGA 9003026 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | | || || | ||| Sbjct 9003027 ATGCTCTCCTTGTCCTGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACC 9003086 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||||||| |||||||| || || |||||||| ||||||||| Sbjct 9003087 TCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 9003134 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | ||||||||||| | || | || |||||||| || || || ||||| | Sbjct 9003133 TTCCACCCCTGAGCCTGAGCACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAG 9003192 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||||| | ||||||| ||||| ||||| || | || || | |||||||||| || Sbjct 9003193 CCAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 9003252 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| ||||| ||||| | | ||| |||||| | ||| Sbjct 9003253 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGA 9003312 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| ||||| | || |||||||| || ||||| Sbjct 9003313 CCTCAAGCGTAATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 9003361 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | || |||||||| |||||||| ||||| || ||||| || | || Sbjct 25235309 GAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATC 25235250 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||||||| || || || | || ||||||||||||||| ||| | ||| ||||| || Sbjct 25235249 CTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATC 25235190 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | | ||| || || | ||| |||| |||||| || Sbjct 25235189 CTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATTGT 25235130 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||||| || | || ||||| || || |||||| Sbjct 25235129 CTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 25235096 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||||||||||| || ||||| ||||| || Sbjct 3435923 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3435864 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | |||||||||| ||| Sbjct 3435863 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3435804 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | ||| || || || |||| Sbjct 3435803 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3435744 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || |||||||| || || | || || || || || ||||| ||| Sbjct 3435743 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3435693 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | || |||||||| |||||||| ||||| || ||||| || | || Sbjct 25235537 GAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATC 25235478 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| || | || || | ||||||||| ||| | ||||||||||| Sbjct 25235477 TTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTC 25235418 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | | ||| ||||| | ||| |||| |||||||| Sbjct 25235417 CTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGT 25235358 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||| || | || ||||| || || ||||| Sbjct 25235357 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 98.7 bits (108), Expect = 8e-16 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 25235065 GTGGACTCCTTCTGGATGTTGTAGTCAGCNNNNNNNNNNCCATCCTCGAGCTGCTTGCCA 25235006 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | |||||||||| ||| | || |||||||| ||||||| || Sbjct 25235005 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 25234946 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||||| | ||| || | ||| || |||||||| || || || Sbjct 25234945 ACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 25234886 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| |||||||| Sbjct 25234885 TTGACAAAGATTTGCAT 25234869 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| ||||| ||||| | || | |||||||| || |||||||| || || || | Sbjct 9003366 CCCCTC--AGCCTAAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGA 9003423 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | ||||||| || || ||||||||| | || || | ||||||||| || | Sbjct 9003424 GGGTGCGCCCGTCCTCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAA 9003483 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 || |||||||| ||||| || || | | | | || ||| || ||| | Sbjct 9003484 TACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCT 9003543 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| ||||||||||| || | || || ||||| || ||||| Sbjct 9003544 CTAGGGTTATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 9003589 >seq9 Length=31548187 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 |||||||| |||| || | ||||||||||| || ||||| ||||| |||| ||| || Sbjct 28897747 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGG 28897688 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||||||||| ||||| || | || || | |||||||||| ||| | || ||| Sbjct 28897687 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 28897628 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| ||||| | | ||| || || || ||| || | || Sbjct 28897627 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 28897568 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||||||||| | || ||||| || || ||||| Sbjct 28897567 ATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 28897530 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | ||||||||||| || ||||| || ||||| Sbjct 28897984 CCACCACGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCA 28897925 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || || ||| | || || | |||||||||| ||| Sbjct 28897924 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 28897865 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | | | ||| || | ||| Sbjct 28897864 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACC 28897805 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || | || || || || || ||||| Sbjct 28897804 TCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 28897758 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||||| ||||||||||| |||||||| || || ||| Sbjct 28421426 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 28421485 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| ||||| ||| | || || | |||||||||| ||| Sbjct 28421486 AGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 28421545 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| ||||| | | ||| | || || ||| Sbjct 28421546 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACC 28421605 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || || || || ||||| || ||||| Sbjct 28421606 TCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 28421652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || ||||| ||||| || | ||||| || || ||||| Sbjct 28421684 GTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCA 28421743 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | |||||||| || | ||| |||||||| ||||| ||| Sbjct 28421744 GCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTC 28421803 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | |||||| || ||| || | ||| ||||||||||| || | || Sbjct 28421804 ACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTC 28421863 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 28421864 TTCACAAAGATCTGCAT 28421880 >seq7 Length=32884216 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||| |||||||| ||||| ||||| || ||||| || | ||||| ||||| Sbjct 29193672 TGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGC 29193613 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| | || || | ||||||||| || | || |||||||| |||||| Sbjct 29193612 TTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTG 29193553 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | ||| || || || ||| |||| |||||||||||||||||| Sbjct 29193552 GCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTG 29193493 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || ||||||||||| Sbjct 29193492 AGGGTCTTCACGAATATTTGCAT 29193470 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||||| ||||||||||| || |||||||| ||||| Sbjct 29193468 CCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCG 29193409 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| ||||| || | ||||| | ||||||||| || Sbjct 29193408 AGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGGG 29193349 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | | | | |||| || ||| Sbjct 29193348 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCATATCGGAGGACTCAACC 29193289 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| ||| ||||||||||| || | || || || ||||| ||||| | ||| Sbjct 29193288 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCATCTGGAA 29193236 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||||||||| || ||||||||||| || ||||| || | ||||| ||||| Sbjct 29194173 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGC 29194114 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | || || | ||||||||| || | ||| ||||| || |||||| Sbjct 29194113 TTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTG 29194054 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | ||| || ||| || ||| |||| || ||||||||||| || Sbjct 29194053 GCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTG 29193994 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || ||||| ||||| Sbjct 29193993 AGGGTCTTCACGAATATCTGCAT 29193971 >seq11 Length=27185770 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||| | ||||||||||| |||||||| ||||| || Sbjct 4344595 CCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 4344654 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| ||||| || | || || | ||||||||| || Sbjct 4344655 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 4344714 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || || |||| Sbjct 4344715 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 4344774 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||| ||||||||| | || || ||||| || ||||| Sbjct 4344775 TCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4344821 >seq5 Length=38039368 Score = 102 bits (112), Expect = 7e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 20982 GACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCA 21041 |||||||| || ||||| ||||| || ||||| | | ||||||||||| ||||| || Sbjct 3286887 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCG 3286946 Query 21042 TAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACC 21101 | || || | |||||||||| ||| | ||| ||||| || |||||| || || Sbjct 3286947 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACA 3287006 Query 21102 TGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTG 21161 | ||| || ||| || |||| || | ||| || ||||||||||| || || || Sbjct 3287007 TTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTC 3287066 Query 21162 ACAAATATTTGCAT 21175 ||||| || ||||| Sbjct 3287067 ACAAAGATCTGCAT 3287080 >seq1 Length=46529941 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 14154187 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 14154246 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| ||||| || | || || | ||||||||| || Sbjct 14154247 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 14154306 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || || |||| Sbjct 14154307 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 14154366 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || || ||||| || || | || || || || || ||||| ||| Sbjct 14154367 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 14154417 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 || || | |||||| | |||| || |||||||| || ||||| ||||| ||||| || Sbjct 27882389 CGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTG 27882330 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074 || ||||||||||||| ||||| || | || || | |||||||| | || ||||| Sbjct 27882329 CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCC 27882270 Query 21075 TCCTTGTCGGCGATC 21089 ||| ||||| |||| Sbjct 27882269 TCCCTGTCGTGGATC 27882255 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| || |||||||| || ||||| ||||| ||| Sbjct 27877964 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 27877905 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| ||||| || | || || | |||||||||| || Sbjct 27877904 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 27877845 Query 21069 ACGCCTTCCTTGTC 21082 | || |||||||| Sbjct 27877844 ATCCCCTCCTTGTC 27877831 >seq12 Length=23490084 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| || |||||||| || ||||| ||||| ||| Sbjct 18639373 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 18639314 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| || | ||||||||||| || ||||| | || || | |||||||||| Sbjct 18639313 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCC 18639260 >seq6 Length=37594838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | || | ||||||||||| || ||||| ||||| ||| Sbjct 7379007 CCACCACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 7379066 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| | ||||||||||||| || || || | || || | |||||||||| Sbjct 7379067 AGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCC 7379120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259138244592