Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq8 140 3e-28 seq11 123 2e-23 seq1 122 8e-23 seq9 120 3e-22 seq5 116 3e-21 seq7 111 1e-19 seq12 87.8 2e-12 >seq8 Length=30429317 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || ||||||||||| ||| | ||||| |||||| Sbjct 25235306 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 25235247 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| ||||||| | |||||| || || || ||||||||||| || Sbjct 25235246 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 25235187 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| | |||||| ||||| | ||| | || || Sbjct 25235186 GATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATTGTCTT 25235127 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || ||||||||||| Sbjct 25235126 GCCAGTGAGAGTCTTGACGAAAATCTGCAT 25235097 Score = 125 bits (138), Expect = 6e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCT 118587 ||||| ||| | || ||||| || || ||||||||||| ||| | ||||| ||||| Sbjct 9002924 CACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT-AAGGTGCGGCCATCCT 9002982 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||||| || ||||| |||| || ||||||||||| || || |||| ||||||||| Sbjct 9002983 CGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCCT 9003042 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| ||| ||| || | || | ||||| | ||| ||||| | ||| | |||| Sbjct 9003043 GAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTT 9003102 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || ||||| || ||||| Sbjct 9003103 TGCCGGTCAATGTCTTGACAAAGATTTGCAT 9003133 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | |||||||| || || || ||||| || || ||||| ||||| Sbjct 9003152 CACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTC 9003211 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || |||||||||||||| Sbjct 9003212 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 9003271 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| || || | ||||||||| | || | || || Sbjct 9003272 AATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTT 9003331 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||||||| || || ||||||||||||||| || Sbjct 9003332 TCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 9003365 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || || |||||||| || | |||||| ||| |||||||| Sbjct 25234844 GTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTG 25234785 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||||||||||||||| || || || || ||||||||||| || || Sbjct 25234784 CTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT 25234725 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||| || | | ||| ||||| | ||| | || ||||| || Sbjct 25234724 GGCCTTTACATTGTCAATGGTATCTGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGT 25234665 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| |||||||| Sbjct 25234664 GAGAGTCTTCACAAAGATCTGCAT 25234641 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| |||||||| || ||||||||||| ||| | || || ||| || Sbjct 25235534 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 25235475 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| || |||||||| || || || || || |||||||| Sbjct 25235474 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 25235415 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||| || | |||||| ||||| | || | || || Sbjct 25235414 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTCTT 25235355 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || ||||| || || || |||||||| Sbjct 25235354 GCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| ||| | ||||| ||||| Sbjct 3435906 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 3435847 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| |||||||| || || || || || |||||||| Sbjct 3435846 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTG 3435787 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||| ||||| | || | || || Sbjct 3435786 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 3435727 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 3435726 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 3435697 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || |||||||| |||||||||||||| | |||||| ||||| Sbjct 9003380 CACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCGTCCTC 9003439 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || || ||||||| |||||||| || || || || ||||||||||| Sbjct 9003440 AAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTG 9003499 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | ||||| | | ||| ||||| | ||| | || || Sbjct 9003500 AATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTT 9003559 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || ||||| |||||||| Sbjct 9003560 GCCAGTGAGTGTCTTCACAAAGATCTGCAT 9003589 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 |||||||||||| || ||||| |||| ||||||||||| || || || || |||||||| Sbjct 25235024 ATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTT 25234965 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| || ||| ||||| | || | || || | ||| ||||| | ||| | Sbjct 25234964 GTCCTGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGAT 25234905 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || ||||| |||| || || ||||| || |||||| || Sbjct 25234904 AGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATGCCT 25234865 >seq11 Length=27185770 Score = 123 bits (136), Expect = 2e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || ||||| || ||||||||||| || | ||||| ||||||| Sbjct 4344614 CAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGA 4344673 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || ||| ||||||| |||||||| || ||||| || ||||||||||| | Sbjct 4344674 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGA 4344733 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||||| | ||| ||||| | ||| | | |||| Sbjct 4344734 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGC 4344793 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || ||||| |||||||| Sbjct 4344794 CGGTCAGGGTCTTCACAAAGATCTGCAT 4344821 >seq1 Length=46529941 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||| | |||||| ||||| Sbjct 14154204 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 14154263 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| ||||||| |||||||| ||||| || || ||||||||||| Sbjct 14154264 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 14154323 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||| ||||| | || | ||| || Sbjct 14154324 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTT 14154383 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 14154384 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 14154413 Score = 105 bits (116), Expect = 6e-18 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| ||| || |||||| ||||| Sbjct 27877947 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 27877888 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 ||||| || || ||| ||||||| |||||||| || || || || |||||||||| ||| Sbjct 27877887 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 27877828 Query 118648 TAATTTTTTGTTTAACCTGTTC--GACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || | ||||| || ||||| ||||||| ||||| | || | || Sbjct 27877827 CACCTTCGCCTTGA---TGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGT 27877771 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || || || |||||||| Sbjct 27877770 CTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 27877738 >seq9 Length=31548187 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| || || ||||| |||||| Sbjct 28897738 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCC 28897679 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||||||||||||||| || || || || ||||||||||| Sbjct 28897678 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 28897619 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||||| | ||||||||| | || | || ||| Sbjct 28897618 ATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTG 28897559 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || |||||||| Sbjct 28897558 CCGGTCAGGGTCTTGACGAAGATCTGCAT 28897530 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || |||||||||||||| || || || |||||| Sbjct 28421443 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTC 28421502 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || || ||||||| |||||||| || || || || ||||||||||| Sbjct 28421503 GAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 28421562 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| |||||| | ||||||||| | || | || || Sbjct 28421563 AATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTT 28421622 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || |||| || || ||||| ||||||||| || Sbjct 28421623 TCCTGTCAAGGTCTTCACAAAGATCTGCATGCCT 28421656 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| ||| ||||| || || ||||||||||| | ||||| |||||| Sbjct 28897967 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 28897908 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || ||||| |||| ||||||||||| || || || |||||||||||||| Sbjct 28897907 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 28897848 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | ||| ||||| | ||| | || || Sbjct 28897847 GATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTT 28897788 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || || || |||||||| Sbjct 28897787 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 28897758 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| | ||||| |||||| || || Sbjct 28421677 GTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTG 28421736 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||||||||| ||||| || || || |||||||||||||| ||| || Sbjct 28421737 CTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGAATCTT 28421796 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | || || | | ||| ||||||| ||| | || ||||| || Sbjct 28421797 GGCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 28421856 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||| Sbjct 28421857 GAGTGTCTTCACAAAGATCTGCAT 28421880 Score = 100 bits (110), Expect = 2e-16 Identities = 333/510 (65%), Gaps = 10/510 (2%) Strand=Plus/Plus Query 44794 CGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACTTTGGC 44853 ||||||| | |||||||| ||||| ||| | || |||| | || || || Sbjct 1132486 CGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCGGCGAGCGC---TTCGC 1132542 Query 44854 CGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTT-TGCGG 44912 ||| || | ||||| |||||| ||||| || | ||||| ||||| || |||| Sbjct 1132543 CGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCATTCTGCGC 1132602 Query 44913 CGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGA 44972 | || || | | || | ||| | ||||| || || || || |||||| | | Sbjct 1132603 C-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 1132661 Query 44973 TTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCG 45032 | || | ||||| ||||| ||| | |||| ||||||||| || || || || Sbjct 1132662 TCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCCTGCCTC--CTCTACGACCTCCTCCG 1132719 Query 45033 ATCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGA 45092 || | | |||| | | |||| | || || || |||| ||||||| |||||||| Sbjct 1132720 CGGCAA-GCTCGACGAGTCACGCGTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGA 1132778 Query 45093 TGGAATTTTT-TGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATG 45151 ||| || | ||| || || || |||| || | || || ||||||| | | ||| Sbjct 1132779 GGGAGTTCGTCTGC-GACGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATG 1132837 Query 45152 AGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATG 45211 || ||||||| ||||| |||||||| || || ||| | | | || |||||| Sbjct 1132838 AGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTCGGGTGCAAGAAGATG 1132897 Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271 ||| | | ||||| ||||| | ||| | || || || ||||||| || || Sbjct 1132898 TACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAAC 1132957 Query 45272 ttttttGAGAAACGCGTCGGCGAATACAAG 45301 || || ||||| ||||||||||| ||| || Sbjct 1132958 TTCTTCGAGAAGCGCGTCGGCGACTACCAG 1132987 >seq5 Length=38039368 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCG 118604 ||||| || || |||||||| || | || | |||||| ||||| || |||||| Sbjct 3286887 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCG 3286946 Query 118605 TAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACC 118664 |||||||||||||||| || || || ||||||||||| ||| || || || || Sbjct 3286947 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACA 3287006 Query 118665 TGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724 | |||| |||||| | | ||| ||||||| ||| | || |||||||||| || || Sbjct 3287007 TTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTC 3287066 Query 118725 ACAAAAATCTGCAT 118738 ||||| |||||||| Sbjct 3287067 ACAAAGATCTGCAT 3287080 >seq7 Length=32884216 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || ||||| |||||||| || | ||||| |||||||||||| || ||| Sbjct 29193666 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 29193607 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||||||||||||||| || || || || ||||||||||| || || || Sbjct 29193606 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 29193547 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | | ||||||||| | ||| | || |||||||| || || Sbjct 29193546 ACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 29193487 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || || || || |||||| || Sbjct 29193486 TTCACGAATATTTGCATGCCT 29193466 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| || ||| | ||||| |||||||||||| || || Sbjct 29194167 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 29194108 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| ||||||| |||||||| || ||||| ||||||||||| || || || || Sbjct 29194107 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 29194048 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | ||| ||||| | || | || ||||| || || || Sbjct 29194047 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTC 29193988 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 29193987 TTCACGAATATCTGCAT 29193971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| ||||| | ||| ||| |||||| ||||| || ||| Sbjct 29193438 GTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCA 29193379 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || || ||||| || ||||| |||||||||||||| ||| || || Sbjct 29193378 GCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 29193319 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | | || | | ||| ||||| | ||| | || ||||| || || || Sbjct 29193318 ACATTGTCAATCATATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 29193259 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 29193258 TTAACGAATATCTGCAT 29193242 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | || || | ||| | || ||||| || || ||||||||||| Sbjct 29193971 TACCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTG 29193912 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||| ||||| || |||||| ||||||| |||||||| || || | Sbjct 29193911 CAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTG 29193852 Query 118630 GTATGCCCTCCTTGTC 118645 | || ||||||||||| Sbjct 29193851 GAATACCCTCCTTGTC 29193836 >seq12 Length=23490084 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || ||||||||||| ||| || |||||| ||| || Sbjct 15023985 ACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCC 15023926 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || || ||| | || | |||||| ||||| ||||| || || |||||||| Sbjct 15023925 AGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 15023870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || ||||||||||| ||| || ||||| |||||| Sbjct 16934316 CACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 16934257 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCC 118636 |||||| || || ||| |||||||||||||||| || || || || || Sbjct 16934256 GAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACC 16934209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830336552304