Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26]
12 sequences; 372,860,283 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 5e-13
>seq8
Length=30429317
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 143046
|| || || || || ||||||||||| ||| | |||| || ||||| || || ||
Sbjct 9002937 GTGGACTCCTTCTGGATGTTGTAATCTGCTAAG-GTGCGGCCATCCTCGAGCTGCTTGCC 9002995
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106
|||| ||||||| || |||||||| || || |||| || ||||| ||| ||| |||
Sbjct 9002996 AGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCCTGAATCTTTGCTTT 9003055
Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
|| | || | ||||| | | || || || | || | || ||||||||||||||
Sbjct 9003056 TACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTTTGCCGGTCAATGT 9003115
Query 143167 TTTTACGAATATTTGCAT 143184
|| || || ||||||||
Sbjct 9003116 CTTGACAAAGATTTGCAT 9003133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014323947840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |