Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9 141 9e-29 seq8 129 6e-25 seq11 127 2e-24 seq1 123 2e-23 seq7 120 3e-22 seq12 107 2e-18 seq5 96.9 3e-15 seq10 89.7 5e-13 seq6 89.7 5e-13 >seq9 Length=31548187 Score = 141 bits (156), Expect = 9e-29 Identities = 355/518 (69%), Gaps = 26/518 (5%) Strand=Plus/Plus Query 46086 GCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGC-ACCGCGA 46144 |||||||| |||||| |||||||||| ||| |||||| || || || | ||| Sbjct 1132484 GCCGTGCGC-CGCAAGG---CCGACTGGGCCATGCGATGGATCGACGGCGGCGAGCGC-- 1132537 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG--CAG 46202 ||||||||||| | || ||||| || || ||||| |||| || || || || Sbjct 1132538 --TTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCA- 1132594 Query 46203 TTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || || ||||||||| | |||| || | || | ||||||| ||||| || || || Sbjct 1132595 TTCTG-CGCCATCTTCTGGCTCAAGAAGCGCGGAC-TCATGCCGGGCCTCACCTTCTCCA 1132652 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321 ||||||| || || ||||||||||| || || ||||| || || ||| ||| || Sbjct 1132653 ACGAGCTCATCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCCTGCCTCCTCTACGAC- 1132711 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACAC-CGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 | | | | || |||||| | | | ||| ||| | | || || || || ||| Sbjct 1132712 --CTCCTCCGCGGCAAGCTCG-ACGAGTCACGCGTCCAGGAGATCGTCGCCGACGCCGTG 1132768 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440 | ||| |||| |||||| | | ||| || |||| || || | || ||||||| Sbjct 1132769 GACATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGC 1132828 Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAG 46500 || ||| || | ||||||||||| || || ||||| |||||| || || || | Sbjct 1132829 GAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGC-TCGGGTG 1132887 Query 46501 C-CGAAGCATTTTC-ACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| || | | ||| ||| ||| || || || | ||| | |||||||||| || Sbjct 1132888 CAAGAAG-ATGTACAACGTCGC-CAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAG 1132945 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || ||||| |||||||||||||| || Sbjct 1132946 GGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 1132983 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | || |||||||| || ||||||||||| Sbjct 28897985 GCCACCACGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGC 28897926 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| |||||||| || || |||| | ||||||||||||||| || Sbjct 28897925 AAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 28897866 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | ||| |||| ||||| | Sbjct 28897865 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAAC 28897806 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| || || || || || || ||||| |||||||| Sbjct 28897805 CTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 28897758 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || |||||||| || || |||||| ||||| ||||||||||| Sbjct 28897727 GGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCC 28897668 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | ||||||||||||||| ||||| || || ||||| ||| || ||| Sbjct 28897667 GGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTT 28897608 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | || || | |||||||| || | || | ||| || ||||| || || Sbjct 28897607 CACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGT 28897548 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 28897547 CTTGACGAAGATCTGCAT 28897530 Score = 114 bits (126), Expect = 1e-20 Identities = 271/393 (69%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 46209 CGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGC 46267 ||||||||| | |||| || | |||| ||||||| ||||| || || |||||||| Sbjct 8707696 CGCCATCTTCTGGCTCAAGAAGCGGGGGC-TCATGCCGGGCCTCACCTTCTCCAACGAGC 8707638 Query 46268 TGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCG 46327 | || || ||||||||||||||||| ||||| || || ||| ||| || | | Sbjct 8707637 TCATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC---CTCC 8707581 Query 46328 TGCACGACAAGCTTGCGCCCGACAC-CGTGCT-GAGCATGTTCAAGGAGGCGGTGGCCAT 46385 | | || |||||| | | | | | ||| | ||| || || || || || | ||| Sbjct 8707580 TCCGCGGCAAGCTCGA-CGAGGCGCGCGTCCGCGAG-ATCGTCGCCGACGCCGTCGACAT 8707523 Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC 46445 |||| |||||| | | ||| || |||| || || | |||||||||| | Sbjct 8707522 CGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCT 8707463 Query 46446 AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC-GA 46504 ||| || | ||||||||||| || || ||||| || ||| || ||| | | || || Sbjct 8707462 CATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCT-CGGCTGCAAGA 8707404 Query 46505 AGCATTTTCA-CG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562 || || | || || ||| ||| || || || | ||| | |||||||||| ||||||| Sbjct 8707403 AG-ATGTACAACGTCGC-CAACCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAA 8707346 Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || ||||| |||||||||||||| || Sbjct 8707345 GACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 8707313 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | ||| |||||||| |||||||||||||| Sbjct 28421425 GCCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGC 28421484 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| |||||||||||||| |||| | |||||||||||||| || Sbjct 28421485 CAGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGG 28421544 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| || ||| ||| | | || | | || | |||||||| Sbjct 28421545 AATTCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGAC 28421604 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || | || || || || ||||||||| || Sbjct 28421605 CTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATGCCT 28421656 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || ||||||||||| | |||||| |||||||| |||||||| Sbjct 28421683 GGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCC 28421742 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||| | ||| |||||||| || || || || || ||||| || || ||| Sbjct 28421743 AGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGAATCTTGGCCTT 28421802 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | ||||| | |||||| | |||| ||| | ||| || || || || || Sbjct 28421803 CACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGT 28421862 Query 131217 TTTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 28421863 CTTCACAAAGATCTGCAT 28421880 >seq8 Length=30429317 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||||| || | ||| |||||||| || || ||||| || || |||||| |||| Sbjct 9003150 AGCACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCC 9003209 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||||||||| ||| |||| | |||||||||||||| ||||| || || ||||| Sbjct 9003210 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 9003269 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 || ||| ||| | | || | ||||| | ||||||| || | |||| ||| Sbjct 9003270 TGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTC 9003329 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || ||||| || || || || |||||||||||| || Sbjct 9003330 TTTCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 9003365 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 3435924 GCCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3435865 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 3435864 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 3435805 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || ||| | | || | || || | |||||| | Sbjct 3435804 GATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 3435745 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 3435744 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 3435697 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| || |||| ||| |||||||| ||||||||||| ||| | |||||| Sbjct 25235311 CGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCA 25235252 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | | |||||||||||| ||||| || || || Sbjct 25235251 TCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTA 25235192 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| ||| | | || | || || | | ||| | || | ||||| Sbjct 25235191 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATT 25235132 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| || |||||||||||||| Sbjct 25235131 GTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 25235097 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| || ||||| || |||||||| || | |||||| || || ||||||||||| Sbjct 25234838 GGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCC 25234779 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | ||||||||||||||| |||||||| || ||||| ||| || ||| Sbjct 25234778 AGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT 25234719 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | ||||| | |||||| | || | ||| | ||| || || || ||||| Sbjct 25234718 TACATTGTCAATGGTATCTGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGT 25234659 Query 131217 TTTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 25234658 CTTCACAAAGATCTGCAT 25234641 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||||| ||||||||||| ||| | ||| || Sbjct 25235539 CGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCA 25235480 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||||||||| ||| |||| | ||||||||||| || || || ||||| ||| Sbjct 25235479 TCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTG 25235420 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | || | ||||||| | ||| | || | |||| | Sbjct 25235419 TCCTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATG 25235360 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| || ||||| |||||||| Sbjct 25235359 GTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GC 131065 ||||||||| | ||| ||||| | || | ||| |||||||| || ||||||||||| || Sbjct 9002906 GCCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGC 9002965 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | | |||||| ||||| ||||||||||| || |||| | |||||||| ||||| | Sbjct 9002966 T-AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGG 9003024 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 | || | || ||||| ||| | | ||| || | | || | || || | ||||| Sbjct 9003025 GAATGCTCTCCTTGTC-CTGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCA 9003083 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | ||||| |||||| ||||| | || || || || || ||||| Sbjct 9003084 ACCTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 9003133 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | || | ||| ||||| || |||||||||||||| | ||||||| |||| Sbjct 9003378 AGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCGTCC 9003437 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || || |||||||| || |||| | ||||||||||| || || || || || ||||| Sbjct 9003438 TCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC 9003497 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 || || ||||| | || | || || | |||||| | || | ||| | ||| Sbjct 9003498 TGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTC 9003557 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || || |||||||| Sbjct 9003558 TTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 9003589 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 22660046 GCCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 22660105 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||| || |||||||| || ||| |||| | |||||||| ||||| || Sbjct 22660106 CAGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATCCGGCGG 22660165 Query 131127 GATTCCT 131133 ||| ||| Sbjct 22660166 GATCCCT 22660172 >seq11 Length=27185770 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| ||||| | ||| | ||| |||||||| ||||||||||| || Sbjct 4344594 GCCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 4344653 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 4344654 AAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGG 4344713 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | || || | |||||| | Sbjct 4344714 GATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 4344773 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| || || || || || |||||||| Sbjct 4344774 CTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4344821 >seq1 Length=46529941 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | |||||||||||| || |||||||| ||| Sbjct 14154186 GCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 14154245 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 14154246 GAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGG 14154305 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | || || | |||||| | Sbjct 14154306 GATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 14154365 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 14154366 CTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 14154413 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 27877965 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 27877906 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 27877905 CAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 27877846 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| | ||| ||||| | || | || ||| || ||| | Sbjct 27877845 GATCCCCTCCTTGTCCTGCACCTTCGCCTTGATGTTCTGGATCGTGTCGCTGCTCTCCAC 27877786 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 27877785 CTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 27877738 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| | ||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 27882396 GCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 27882337 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| |||| | |||||||||| ||| || Sbjct 27882336 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGG 27882277 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | ||| || | ||| | |||| Sbjct 27882276 GACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGAC 27882217 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || | ||| | ||| | || || || ||||| |||||||| Sbjct 27882216 CACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCAT 27882169 >seq7 Length=32884216 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | ||| || |||||||| |||||||| || | |||||| Sbjct 29193684 CGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCA 29193625 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || || |||| | |||||||||||| || |||||||| || ||| Sbjct 29193624 TCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTG 29193565 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | || | || |||| |||||||| || | ||||| | Sbjct 29193564 TCCTGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATG 29193505 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || ||||| || || || ||||| || |||||| || Sbjct 29193504 GTCTTGCCGGTGAGGGTCTTCACGAATATTTGCATGCCT 29193466 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | ||| |||||||| || ||||| || ||| Sbjct 29194197 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 29194138 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| |||||| Sbjct 29194137 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 29194078 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | || || | |||||| | Sbjct 29194077 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACC 29194018 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 29194017 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAATATCTGCAT 29193971 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || ||||| ||||| | || ||| ||||| ||||||||||| Sbjct 29193439 GGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCC 29193380 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | || ||||||||||||||||| || || ||||| || || ||| Sbjct 29193379 AGCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTT 29193320 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | |||||| |||||| | || | ||| | ||| || || || || || Sbjct 29193319 CACATTGTCAATCATATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGT 29193260 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 29193259 CTTAACGAATATCTGCAT 29193242 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | ||| |||||||| || ||||||||||| | |||||| Sbjct 29193957 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCA 29193898 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | ||||||||||| || || || || || ||| Sbjct 29193897 TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTG 29193838 Query 131140 TC 131141 || Sbjct 29193837 TC 29193836 >seq12 Length=23490084 Score = 107 bits (118), Expect = 2e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | || ||||| | || | ||||||||||| ||||||||||| ||| Sbjct 16934334 GCCACCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGC 16934275 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 16934274 CAGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGG 16934215 Query 131127 GATTCCT 131133 ||| ||| Sbjct 16934214 GATACCT 16934208 Score = 100 bits (110), Expect = 3e-16 Identities = 102/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| ||||||||| | || || || | || | || |||||||| || |||||||| Sbjct 23214150 ATGATGCCACCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAG 23214091 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| || |||||| ||||| ||||||||||| ||| |||| | |||||||||||| Sbjct 23214090 TCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCC 23214031 Query 131122 GGAGGGATTCCT 131133 |||||||| ||| Sbjct 23214030 GGAGGGATGCCT 23214019 Score = 98.7 bits (108), Expect = 9e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 18639374 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 18639315 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||| Sbjct 18639314 CAGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGG 18639255 Query 131127 GATTCCT 131133 ||| ||| Sbjct 18639254 GATACCT 18639248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 18657051 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 18656992 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || |||||||| || ||| |||| | |||||||||||||| || Sbjct 18656991 CAGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 18656932 Query 131127 GATTCCT 131133 ||| ||| Sbjct 18656931 GATACCT 18656925 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||||||||| ||| || |||||| || || ||||||||||| Sbjct 15023973 GTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCG 15023914 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| | || |||||||| || || |||||||| ||||| ||||| Sbjct 15023913 GCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 15023870 >seq5 Length=38039368 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131041 GACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGC 131099 |||||||| || |||||||| || | ||| | || | ||||| ||||||||||| || Sbjct 3286887 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCA-TCCTCCAGCTGCTTGCCAGC 3286945 Query 131100 GTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAG 131159 | |||| | ||||||||||||||| ||||| || || || || ||| || ||||| Sbjct 3286946 GAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGAC 3287005 Query 131160 CTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTT 131219 | || | || || | |||||| | |||| ||| | || || ||||| | || || Sbjct 3287006 ATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTT 3287065 Query 131220 TACGAAAATCTGCAT 131234 || || |||||||| Sbjct 3287066 CACAAAGATCTGCAT 3287080 >seq10 Length=28350858 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | ||||||||||| || |||||||| ||| Sbjct 16401389 GCCGCCGCGGAGGCGAAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 16401448 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 16401449 CAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGG 16401508 Query 131127 GATTCCT 131133 ||| ||| Sbjct 16401509 GATCCCT 16401515 >seq6 Length=37594838 Score = 89.7 bits (98), Expect = 5e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || |||||||| || || |||||| |||||| |||||||| || Sbjct 7379036 GGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCCAGCTGCTTCCC 7379095 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCT 131133 ||| |||| | |||||||||||||| ||||||||| Sbjct 7379096 GGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCCT 7379132 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || ||||| | || | || |||||||| || |||||||| ||| Sbjct 8552865 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 8552806 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 8552805 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8552746 Query 131127 GATTCCT 131133 ||| ||| Sbjct 8552745 GATACCT 8552739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012729198080