Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq8 141 1e-28 seq11 127 2e-24 seq9 116 4e-21 seq7 116 4e-21 seq5 95.1 1e-14 seq12 89.7 6e-13 seq6 82.4 9e-11 >seq1 Length=46529941 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 27877947 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 27877888 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||| | ||| | | |||||||||| Sbjct 27877887 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 27877828 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 | |||| ||||| || | ||||||||| ||||| |||| ||||||||| || Sbjct 27877827 CACCTTCGCCTTGATGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 27877768 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || || ||||| ||||| Sbjct 27877767 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 27877738 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 14154204 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 14154263 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||||| ||| | | |||||||||| Sbjct 14154264 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 14154323 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | ||||| || ||||| |||| |||||| || | Sbjct 14154324 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 14154382 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||||||| || || || ||||| ||||| ||| Sbjct 14154383 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 14154417 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 27882378 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 27882319 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | |||||||||| | ||| |||| |||| |||| Sbjct 27882318 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTG 27882259 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||| || ||||| || | |||| ||||| || || | | ||||||||| | Sbjct 27882258 GATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCT 27882199 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || |||| || || || || || ||||| || Sbjct 27882198 CCCGTTCAGGGTCTTCACGAATATCTGCATCTT 27882166 >seq8 Length=30429317 Score = 141 bits (156), Expect = 1e-28 Identities = 151/197 (77%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 3435888 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3435829 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | ||||||||| |||||| ||| | ||| Sbjct 3435828 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3435770 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| ||||||||| || |||||||| || || | Sbjct 3435769 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3435710 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||| ||||| ||| Sbjct 3435709 CGAAGATCTGCATCTTG 3435693 Score = 138 bits (152), Expect = 1e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| ||||| || |||||| ||||| ||||| || | || ||||| | Sbjct 9002918 ACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCC 9002977 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| || || |||| ||||||||| || | || | ||||||||| Sbjct 9002978 ATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTT 9003037 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| | ||| ||| | | | ||||| ||| || || |||| || | Sbjct 9003038 GTCCTGAATCTT-TGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAA 9003096 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||||||||| |||| || || ||||||||||||||| Sbjct 9003097 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 9003134 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||| |||||| |||||||||||||| | || ||||| |||| || Sbjct 9003152 CACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTC 9003211 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | || | || |||||||||| Sbjct 9003212 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 9003271 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | || || || || || || | ||| ||||| || Sbjct 9003272 AATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTT 9003331 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || ||||| || ||||| Sbjct 9003332 TCCGGTCAGGGTCTTGACAAAAATCTGCAT 9003361 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | || |||||| | || |||||||||||||| ||||| Sbjct 25234831 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 25234772 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 25234771 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 25234712 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || || || || | || ||||| ||||| || || || || ||| Sbjct 25234711 TCAATGGTATCTGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 25234652 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 25234651 AAGATCTGCAT 25234641 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| || || |||||||||| || || || | || || Sbjct 25235534 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 25235475 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||||||| | || | | ||||||||| Sbjct 25235474 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 25235415 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | || || |||| || || |||| || ||||| Sbjct 25235414 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGT 25235358 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 25235357 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || ||||| || | || |||||| |||| || || |||||||| || || Sbjct 9003398 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCGTCCTCAAGTTGCTTGCCCGCAAA 9003457 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| ||||| ||||| | Sbjct 9003458 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATT 9003517 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | || ||||| ||||| || || || || || Sbjct 9003518 GTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTTGCCAGTGAGTGTCTTCAC 9003577 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 9003578 AAAGATCTGCAT 9003589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/193 (69%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | || |||||||||||||| || || Sbjct 25235060 CTCCTTCTGGATGTTGTAGTCAGCNNNNNNNNNNCCATCCTCGAGCTGCTTGCCAGCAAA 25235001 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||||||| |||||| | | | | ||| Sbjct 25235000 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTT-TGCCTTAACGT 25234942 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || || | ||||| || ||||| |||| || || | Sbjct 25234941 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 25234882 Query 46581 CAAAGATTTGCAT 46593 ||||||||||||| Sbjct 25234881 CAAAGATTTGCAT 25234869 >seq11 Length=27185770 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | || |||||| || || |||||||| | || ||||| | Sbjct 4344606 ACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCC 4344665 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||||||||| || | |||||||||||| | || | | |||||| Sbjct 4344666 TTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTT 4344725 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||||| ||| | ||| | | | ||||| || ||||| || | |||| Sbjct 4344726 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGA 4344784 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| ||||| || || |||||||| ||||| Sbjct 4344785 TGGACTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4344821 >seq9 Length=31548187 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | ||||| | || || ||||||||||||||||| Sbjct 28897721 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 28897662 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 28897661 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 28897603 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||||||| ||||| ||||| || || | Sbjct 28897602 TGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGA 28897543 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 28897542 CGAAGATCTGCAT 28897530 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| ||||| ||||| || | || ||||| | || || Sbjct 28897967 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 28897908 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| || || || |||| ||||||||||| | || | || |||||||||| Sbjct 28897907 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 28897848 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | |||||| ||| || || || | || ||||| | Sbjct 28897847 GATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCT 28897789 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || ||||| ||||| Sbjct 28897788 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 28897758 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| ||||| || |||||| || || ||||| || | || || || | || || Sbjct 28421443 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTC 28421502 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | |||||||||||| | || | | |||||||||| Sbjct 28421503 GAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 28421562 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | | |||| || || || || | |||||||| || Sbjct 28421563 AATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTT 28421622 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || |||||||| ||||| Sbjct 28421623 TCCTGTCAAGGTCTTCACAAAGATCTGCAT 28421652 >seq7 Length=32884216 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| || ||||||| || ||||| | Sbjct 29194185 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCA 29194126 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | |||||||||||| | || | || |||||| Sbjct 29194125 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTA 29194066 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||| | ||| | | | ||||| || || || |||| ||||| Sbjct 29194065 TCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGAT 29194007 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || || || ||||| Sbjct 29194006 GGTCTTGCCAGTGAGGGTCTTCACGAATATCTGCAT 29193971 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| | || ||||| | || ||||||||||| || || || Sbjct 29193660 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 29193601 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 29193600 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 29193541 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| || || || |||| || ||||| ||||| || || || || || Sbjct 29193540 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 29193481 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 29193480 AATATTTGCAT 29193470 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||| ||||| || || || | ||||| ||| | || || Sbjct 29193450 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCA 29193391 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| || | ||| |||||||| | || | || |||||||||| Sbjct 29193390 AGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 29193331 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | | | ||| || || || |||| |||||||| ||| Sbjct 29193330 ATCTTAGCCTTCACATTGTCAATCATATCGGAGGACTCAACCTCCAAGGTGATGGTCTTG 29193271 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || || ||||| Sbjct 29193270 CCAGTGAGGGTCTTAACGAATATCTGCAT 29193242 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||| || | || ||||| | Sbjct 29193957 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCA 29193898 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| ||||| || | |||||||||||| | || | | ||||||| Sbjct 29193897 TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTG 29193838 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 29193837 TCCTGGATCTT 29193827 >seq5 Length=38039368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || ||||||||||| ||||| Sbjct 3286889 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3286948 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||| || |||||| ||||| | Sbjct 3286949 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3287008 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | ||||| || ||||| |||| || || || Sbjct 3287009 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 3287068 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 3287069 AAAGATCTGCAT 3287080 >seq12 Length=23490084 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 18657033 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCATC 18656974 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| |||||||| || | |||||||||||| | ||| Sbjct 18656973 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 18656932 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| || |||||| | || || ||||||||||||||||| Sbjct 15023968 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 15023909 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 |||||| ||||| || || | || | | ||||||||| Sbjct 15023908 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 15023869 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || ||||||||||||||||| Sbjct 23214109 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 23214050 Query 46462 TATCAAGCGCTGCTGGTC 46479 || | |||||||||||| Sbjct 23214049 GATGAGGCGCTGCTGGTC 23214032 >seq6 Length=37594838 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || | || || | |||||| || | || |||||| ||||| |||||||||| Sbjct 8552865 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 8552806 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || |||||||| |||||||| || | |||||||||||| | ||| Sbjct 8552805 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8552746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240