Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq9 232 8e-55 seq1 141 1e-27 seq6 127 2e-23 seq11 120 4e-21 seq3 109 7e-18 seq12 105 8e-17 seq8 105 8e-17 seq10 102 1e-15 >seq9 Length=31548187 Score = 232 bits (256), Expect = 8e-55 Identities = 250/323 (77%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| || Sbjct 8707297 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 8707356 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 ||||| | ||||||||| ||| ||||| |||| | ||||| ||| | ||| |||| Sbjct 8707357 GGAGATGAGCTCCATCCAGTCGAAGGGGTT-GGCGACGTTGTACATCTTCTTGCAGCCGA 8707415 Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862 ||| | ||| |||||||||||||| |||||||||||||||| ||||||| || |||||| Sbjct 8707416 GCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCA 8707475 Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922 |||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| | Sbjct 8707476 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 8707535 Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980 || ||| ||||| | || | || || | || | ||||| | ||| | |||||| Sbjct 8707536 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 8707593 Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003 |||||||| ||||||||||||| Sbjct 8707594 GAGGCAGGCGAAGTCGCAGTGCA 8707616 Score = 230 bits (254), Expect = 3e-54 Identities = 248/322 (77%), Gaps = 5/322 (2%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| ||||| |||||| |||||| |||||||||||||||| || ||||| Sbjct 1132993 CGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGAT 1132934 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||||||||||| || | ||||| ||| | ||| ||||||| | Sbjct 1132933 GAGCTCCATCCAGTCGAACGGGTTGG-CGACGTTGTACATCTTCTTGCACCCGAGCGCCA 1132875 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||||| ||||||||||| |||||||||||||||| |||||| || ||||||| |||| Sbjct 1132874 TGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGA 1132815 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| ||||||| || ||||| ||| ||| Sbjct 1132814 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACGGCGTCGGCGA 1132755 Query 868929 TGATCTGCCTGGGCACGTCGGCCG-AGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||| ||||| | ||| || | ||||| | ||| | |||||| |||||| Sbjct 1132754 CGATCT-CCTGGACGCGTGACTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAGGAGGCAG 1132696 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || ||||||||||| | ||||| Sbjct 1132695 GCGAAGTCGCAGTGGAGACCCT 1132674 Score = 228 bits (252), Expect = 1e-53 Identities = 219/277 (79%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||||| | | |||| || || | Sbjct 1132400 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTCGGCGACCT 1132341 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||||| | ||| ||||||||| ||||||||||||| |||||||| Sbjct 1132340 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGA 1132281 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCG-CTGAGCGACA-CCCAGT 869807 | || || || ||||| || |||||||||||||| | || | | ||| || |||||| Sbjct 1132280 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGACGACAGCGCGGCATCCCAGT 1132221 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| | Sbjct 1132220 GGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCT 1132161 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||| | |||||| | ||| |||| | ||| ||||| Sbjct 1132160 TGTAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 1132124 Score = 192 bits (212), Expect = 7e-43 Identities = 214/286 (75%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| |||||| |||||||| |||||||| Sbjct 1132678 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTT 1132619 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| |||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 1132618 CTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAAGAAGATCCCCTCGACGCAGGCGAA 1132559 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | ||| ||| |||||||| ||| ||| ||| || |||||| ||| ||||| Sbjct 1132558 GGCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCA 1132505 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||||||||| | ||| | || || |||||||||||||| |||||| ||||||| || Sbjct 1132504 GTCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTC 1132445 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||| || || || |||| ||| ||||| || ||||| Sbjct 1132444 GACGTCGTCGCGGATGTACGTCTCGAGCAGAAGCGAGTACATCTCC 1132399 >seq1 Length=46529941 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2747275 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2747216 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2747215 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2747156 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2747155 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2747096 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2747095 GGACCTGCTTGAGCACCTTGAAGATG 2747070 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2950445 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2950386 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2950385 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2950326 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2950325 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2950266 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2950265 GGACCTGCTTGAGCACCTTGAAGATG 2950240 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| ||||| |||||||||||||| | | || Sbjct 2908369 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCAGTCTGGATCTCGCGGGAGGTGA 2908428 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 2908429 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2908488 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| || || ||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2908489 TGTCATTGATGAAGGAATTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2908548 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2908549 GGACCTGCTTGAGCACCTTGAAGATG 2908574 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2920997 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2921056 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2921057 TGGTGGGCTTCTTGTTGTAGCGGGCGAGTTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2921116 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2921117 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCTATGTCGGGGT 2921176 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2921177 GGACCTGCTTGAGCACCTTGAAGATG 2921202 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 38554517 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 38554576 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || |||||| ||||||| | ||| |||| | Sbjct 38554577 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 38554636 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| | Sbjct 38554637 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 38554696 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| | ||| Sbjct 38554697 GCACCTGCTTGAGGACCTTGAAAATG 38554722 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2913326 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGA 2913385 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 2913386 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2913445 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2913446 TATCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2913505 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2913506 GGACCTGCTTGAGCACCTTGAAGATG 2913531 Score = 116 bits (128), Expect = 5e-20 Identities = 154/210 (73%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG---TGC 1254399 || |||| || |||||| | | || ||||| || | ||||| ||||||||| | || Sbjct 19609597 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACAGAGGTCTAGATCTCGCGGGAGGTGG 19609656 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCG 1254458 || | | || |||||| || | || || ||| ||||||| ||| ||| ||| Sbjct 19609657 CGGTGGGCTT---CTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCG 19609712 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | ||||| |||| || |||||||||| |||||| | |||| ||||||||| | ||| Sbjct 19609713 AAGATGTCATTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCC 19609772 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||| || |||||| ||||| Sbjct 19609773 GGGTGCACCTGCTTCAGGACCTTGAAGATG 19609802 Score = 89.7 bits (98), Expect = 6e-12 Identities = 95/123 (77%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| || ||||||||||||||||| Sbjct 30901554 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCACCCATCGTGCACCGCGA 30901498 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| ||||||||||| Sbjct 30901497 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 30901438 Query 1349547 CCT 1349549 ||| Sbjct 30901437 CCT 30901435 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 25063187 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 25063128 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 25063127 CGCGTGGCAGCGGCGGAGCGCGCCGAGGCCGACAAG 25063092 >seq6 Length=37594838 Score = 127 bits (140), Expect = 2e-23 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 9605719 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 9605660 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 9605659 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 9605601 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| |||||| | |||| |||||| || | ||| ||| Sbjct 9605600 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGG 9605541 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||| || |||||| | ||| Sbjct 9605540 TGCACCTGCTTCAGGACCTTGAATATG 9605514 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 2478491 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 2478432 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 2478431 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 2478373 Query 1347726 CACCG 1347730 | ||| Sbjct 2478372 CGCCG 2478368 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488 ||||||||| | |||| ||||||||| | | ||||||||||| ||||||||| Sbjct 6851433 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 6851492 Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548 ||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || | Sbjct 6851493 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 6851552 Query 1349549 TGGCGCGCAT 1349558 || |||| || Sbjct 6851553 TGTCGCGGAT 6851562 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520 ||||||| || ||| ||||| || | || || || || ||||| ||||| |||| Sbjct 27698130 TCGATGATCATCTGCGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCGGTGTCGGAGTGG 27698189 Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580 |||||||| | ||| || ||| ||| || |||||||| ||||| || || ||||| ||| Sbjct 27698190 TTGAAGAGGATGACCCCTACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCACG 27698249 Query 1572581 TCGAT 1572585 ||||| Sbjct 27698250 TCGAT 27698254 >seq11 Length=27185770 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| | | | || Sbjct 22606638 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 22606579 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | |||||||| | ||| |||| | Sbjct 22606578 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 22606519 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| |||||| || | ||| |||| Sbjct 22606518 TGTCGTTGATGAACGAGTTCATGATTGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 22606459 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 22606458 GCACCTGCTTGAGCACCTTGAAGATG 22606433 >seq3 Length=27098305 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| |||| || ||| ||| || |||| || || Sbjct 14843759 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 14843818 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 14843819 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 14843873 >seq12 Length=23490084 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || | ||||| || Sbjct 21422644 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 21422585 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| Sbjct 21422584 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 21422534 >seq8 Length=30429317 Score = 105 bits (116), Expect = 8e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || || || | ||||||||||||||| | | || Sbjct 22846899 GCTTGGCAAGCTCGCCGGGGAGGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGA 22846840 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| | || || | | ||||||| ||| ||| |||| Sbjct 22846839 TTGTGGGCTTCTTGTTGTACCTGGCAAGCCTGGCGGCCTCC-TGCGCGAGCTTCTCGAAA 22846781 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || || ||||||| ||||| | |||| |||||| || | ||| || Sbjct 22846780 ATGTCGTTGATGAAGGAATTCATGATGGACATGGCCTTGGAGGAGATTCCTATGTCTGGA 22846721 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||||| ||||| Sbjct 22846720 TGCACCTGCTTGAGCACCTTGAAGATG 22846694 Score = 105 bits (116), Expect = 8e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1254436 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCG 1254495 ||||||||| | ||| |||| |||||||||| || |||||||||| ||||| | Sbjct 29204697 CGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGG 29204638 Query 1254496 ACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| ||||||||| | ||||||||| |||||||||||||||||| ||||| Sbjct 29204637 CCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTGAAGATG 29204585 >seq10 Length=28350858 Score = 102 bits (112), Expect = 1e-15 Identities = 125/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 ||||||| | || || ||||| | || ||| | ||||||| || | ||| || Sbjct 24786475 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGGACGCCCTCTTCGATGTCATCGCGGC 24786534 Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||||| | ||||| ||||| || |||||| || ||| || Sbjct 24786535 CGCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 24786592 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 24786593 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 24786640 Score = 87.8 bits (96), Expect = 2e-11 Identities = 168/241 (70%), Gaps = 19/241 (8%) Strand=Plus/Minus Query 1349440 GGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCAAGAGCGGC 1349499 ||| |||||||||| |||| | | ||||||||| | ||||||||||||||| ||| | Sbjct 4394309 GGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCACCGCGACCTCAAGTGCGAC 4394250 Query 1349500 AACCTGCTGGTCGACCAAAACTA---CAACGTCAAGGTGGCCGACTTTGGCCTGGCGCGC 1349556 ||| | | ||| || ||| | | | |||||| | | |||| | ||||| || ||| Sbjct 4394249 AACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGC-CGC 4394191 Query 1349557 ATTAAGGAG-GACAAC----GCCACGATGACCCGCTG---CGGCACGCCCTGCTGGACGG 1349608 || | | | | | |||||| | ||||| ||||||||| | | || Sbjct 4394190 GTTCCGCCGCGGCGCCGGCGGCCACG----CACGCTGCGTCGGCACGCCGGAGTTCATGG 4394135 Query 1349609 CGCCCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCA 1349668 | |||||||| || || |||| ||||||||||| |||||||||||||| || |||| Sbjct 4394134 CTCCCGAGGT-GTA--CGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCA 4394078 Query 1349669 T 1349669 | Sbjct 4394077 T 4394077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138215223804