Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26]
12 sequences; 372,860,283 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq9 167 2e-36
seq1 140 3e-28
seq8 136 4e-27
seq11 134 1e-26
seq7 127 2e-24
seq5 118 1e-21
seq12 91.5 1e-13
seq6 82.4 7e-11
>seq9
Length=31548187
Score = 167 bits (184), Expect = 2e-36
Identities = 353/515 (69%), Gaps = 20/515 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||||||||||| ||||| || ||||| || ||||||| || || ||| |
Sbjct 1132987 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTC 1132928
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCC---AACTGTACGAG 120467
||| | |||||||||||| |||| ||| || || || | | | | |||
Sbjct 1132927 CATCCAGTCGAACGGGTTGGCGACGTT---GTACATCTTCTTGCACCCGAGCGCCATGAG 1132871
Query 120468 CAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAA 120527
||| ||||| || || ||||| ||||||| || |||| || ||||||| || | |
Sbjct 1132870 CAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGACGAG 1132811
Query 120528 CGCCACCGGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586
||| || || | ||| | || || |||||| |||| |||||||| || || || |
Sbjct 1132810 CGCGACGGGGAGCGC-GTCGCAGACGAACTCCCTCTCGATGTCCACGGCGTCGGCGACGA 1132752
Query 120587 TGGCGAGCATAGTGTGGCCGGGC-ATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645
| | | | | ||| | | | | |||| || | | ||| ||| |||||
Sbjct 1132751 TCTCCTGGAC-GCGTGACTCGTCGAGCTTGCCGCGGAGGAGG--TCG-TAGAGGAGGCAG 1132696
Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705
|| ||||| ||| || ||||||||||| || || ||||||||| || || |||||
Sbjct 1132695 GCGAAGTCGCAGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCC 1132636
Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765
||||||| || | |||||| |||| |||||| || ||||| ||||| |
Sbjct 1132635 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAAGAAGATC 1132576
Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA-CG-TCGCCGTCTTGCTGTCGA 120823
||||| ||| ||| |||||||| | ||||||||| || || ||||| || |||||
Sbjct 1132575 CCCTCGACGCAGGCGAAGGCGACGAGGCGCTCGGCGAAGCGCTCGCC-----GCCGTCGA 1132521
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACG 120858
|||| ||||||||| |||||||| |||||||
Sbjct 1132520 TCCATCGCATGGCCCAGTCGGCCTTGCGGCGCACG 1132486
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || ||| ||| | | | ||||| ||||||||||
Sbjct 28897727 GGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCA-TCCTCCAGCTGCTTGC 28897669
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| || ||||| || |||||||| |||||| ||
Sbjct 28897668 CGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCT 28897609
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | |||||| | || ||| || || | |||| ||| ||||||||||| |
Sbjct 28897608 TCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGG 28897549
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 28897548 TCTTGACGAAGATCTGCAT 28897530
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || |||||||| | | ||| | | | ||||| |||||||| ||
Sbjct 28897954 GTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCA-TCCTCAAGCTGCTTACC 28897896
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| || |||||||| |||||||| |||||| |||
Sbjct 28897895 AGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTT 28897836
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||||| | ||| || || | ||| | ||| ||||| ||||| ||
Sbjct 28897835 CACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGT 28897776
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 28897775 CTTCACGAAGATCTGCAT 28897758
Score = 111 bits (122), Expect = 2e-19
Identities = 148/204 (73%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTG 133520
||||||||| ||||| || |||||||| ||| ||| ||| |||||||||||||||
Sbjct 28421455 GGTGGACTCCTTCTGAATGTTGTAATCAGCCA--GTGTACGTCCATCCTCGAGCTGCTTG 28421512
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| || | ||||| ||||||||||| || || || || |||||||| ||||| |
Sbjct 28421513 CCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTCGCC 28421572
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | || | | |||| | || ||| || || | |||| ||| || || ||||
Sbjct 28421573 TTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTCAAG 28421632
Query 133641 GTTTTTACGAAAATCTGCATGGCT 133664
|| || || || ||||||||| ||
Sbjct 28421633 GTCTTCACAAAGATCTGCATGCCT 28421656
>seq1
Length=46529941
Score = 140 bits (154), Expect = 3e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| ||| |||| | |||||| |||||||||||
Sbjct 27877934 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCCAGCTGCTTGCCG 27877875
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||||||||||||||| || ||||| || |||||||| | ||| ||||
Sbjct 27877874 GCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGCACCTTCGCCTTG 27877815
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| || |||||| || | |||| ||| || || ||||| ||
Sbjct 27877814 ATGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTC 27877755
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 27877754 TTCACGAAGATCTGCAT 27877738
Score = 132 bits (146), Expect = 5e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| ||| | | ||| | |||||| |||||||||||
Sbjct 14154216 GGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCC 14154275
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | |||||||||||||||||||| ||||| || |||||||| |||||| |||
Sbjct 14154276 GGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTT 14154335
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | || |||||| || | |||| || || || ||||| ||
Sbjct 14154336 CACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGT 14154395
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 14154396 CTTCACGAAGATCTGCAT 14154413
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| ||| |||| |||||| |||||||||||
Sbjct 27882365 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCG 27882306
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | |||||||||||||||| || |||| ||| ||| ||||| |||| | ||||
Sbjct 27882305 GCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTG 27882246
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||| |||| |||| | || || ||| |||| ||| | ||| |||| ||
Sbjct 27882245 ACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTC 27882186
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 27882185 TTCACGAATATCTGCAT 27882169
>seq8
Length=30429317
Score = 136 bits (150), Expect = 4e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | | ||| ||||||||||||||||||
Sbjct 3435894 GGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 3435835
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || ||||| ||||||||||| |||||| |||
Sbjct 3435834 GGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTT 3435775
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | || |||||| || | |||| ||| || || ||||| ||
Sbjct 3435774 CACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGT 3435715
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 3435714 CTTCACGAAGATCTGCAT 3435697
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||||||||| || |||||||| | | ||| | |||||| || ||||||||
Sbjct 9003392 GGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCGTCCTCAAGTTGCTTGCC 9003451
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || || || || |||||||| ||||| |||
Sbjct 9003452 CGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTT 9003511
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| |||||| | || ||| || || | ||| | ||| ||||| || || ||
Sbjct 9003512 GACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTTGCCAGTGAGTGT 9003571
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 9003572 CTTCACAAAGATCTGCAT 9003589
Score = 122 bits (134), Expect = 8e-23
Identities = 148/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| |||||||| || ||| ||| ||||||||||||||||||
Sbjct 9003164 GGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCGAGCTGCTTGCC 9003223
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || |||||||| |||||||| ||||| |||
Sbjct 9003224 GGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTT 9003283
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | | ||| || || | || | ||| || |||||||| ||
Sbjct 9003284 CACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTTTCCGGTCAGGGT 9003343
Query 133643 TTTTACGAAAATCTGCATGGCT 133664
|| || |||||||||||| ||
Sbjct 9003344 CTTGACAAAAATCTGCATGCCT 9003365
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||| || ||||| || ||||| || | | |||| | || ||||||||||||||
Sbjct 25234838 GGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCC 25234779
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || ||||| || |||||||| |||||| |||
Sbjct 25234778 AGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT 25234719
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| || || | || ||| || || | ||| | ||| ||||| || |||||
Sbjct 25234718 TACATTGTCAATGGTATCTGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGT 25234659
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 25234658 CTTCACAAAGATCTGCAT 25234641
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| |||| ||| ||||| ||||| || ||||| ||| | | ||| | | | ||||| ||
Sbjct 25235302 AAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCA-TCCTCCAG 25235244
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | ||||| | ||||||||| || |||||||| ||||| || |||
Sbjct 25235243 CTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGAT 25235184
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | || | ||||| | | ||| || || | ||| | || |||||
Sbjct 25235183 CTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATTGTCTTGCC 25235124
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || ||||||||||||||
Sbjct 25235123 AGTGAGAGTCTTGACGAAAATCTGCAT 25235097
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | | ||| | | | ||||||||||||||||
Sbjct 9002936 GGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCCA-TCCTCGAGCTGCTTGC 9002994
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || |||||||| || || || |||| |||||||| |||||| |
Sbjct 9002995 CAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCCTGAATCTTTGCTT 9003054
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||| | | ||| || || | ||| | |||||||||||||| |
Sbjct 9003055 TTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTTTGCCGGTCAATG 9003114
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || || |||||
Sbjct 9003115 TCTTGACAAAGATTTGCAT 9003133
Score = 100 bits (110), Expect = 3e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| ||| | | || | | | || || ||||||||||
Sbjct 25235522 GGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCA-TCTTCCAGCTGCTTGC 25235464
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || || || ||||||||||| |||||| ||
Sbjct 25235463 CGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCT 25235404
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | || |||| | ||| || || | || | ||| ||||| || ||||
Sbjct 25235403 TCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAG 25235344
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 25235343 TCTTGACGAAGATCTGCAT 25235325
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/203 (70%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || | | ||||||||||||||||
Sbjct 25235066 GGTGGACTCCTTCTGGATGTTGTAGTCAGCNNNNNNNNNNCCA-TCCTCGAGCTGCTTGC 25235008
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || ||||||||||| || || || || |||||||| ||||||| ||
Sbjct 25235007 CAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCT 25234948
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| || || | | ||| || || | ||||| || ||||| |||| |
Sbjct 25234947 TAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGG 25234888
Query 133642 TTTTTACGAAAATCTGCATGGCT 133664
| || || || || |||||| ||
Sbjct 25234887 TCTTGACAAAGATTTGCATGCCT 25234865
>seq11
Length=27185770
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||| ||||| || ||||| || | | ||| |||||||||||
Sbjct 4344618 ATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTG 4344677
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| ||| | ||||| ||||||||||| |||||||| || |||||||| ||||||
Sbjct 4344678 CTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTT 4344737
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | || | ||||| | || |||||| || | ||||| || ||||||||
Sbjct 4344738 CGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGT 4344797
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || || ||||||||
Sbjct 4344798 CAGGGTCTTCACAAAGATCTGCAT 4344821
Score = 89.7 bits (98), Expect = 5e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 133537 GCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCG 133596
|||||||||| | |||||||||||||||| |||||| ||| | | || | ||
Sbjct 4350690 GCTGCTGGTCAGAGCGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTCGTCGATCG 4350749
Query 133597 TGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCT 133656
|||||| || | ||| |||| ||||| ||| ||||||||||||| || |||| ||||
Sbjct 4350750 TGTCGGATGGTTTCACCTCGAGGGTGATGGTGATGCCGGTCAGAGTCTTCACGATGATCT 4350809
Query 133657 GCAT 133660
||||
Sbjct 4350810 GCAT 4350813
>seq7
Length=32884216
Score = 127 bits (140), Expect = 2e-24
Identities = 149/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || || || ||| | | ||| | | | ||||||||||||||||
Sbjct 29194168 GGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 29194110
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| ||||||||||| ||||| || |||||| ||
Sbjct 29194109 CGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCT 29194050
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||||| | || ||| || || | |||| ||| ||||| || || |
Sbjct 29194049 TCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGG 29193990
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 29193989 TCTTCACGAATATCTGCAT 29193971
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || || ||||| | | || | ||||| |||||||||||
Sbjct 29193439 GGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCC 29193380
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct 29193379 AGCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTT 29193320
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| | | |||| || ||| || || | ||||| ||| ||||| || || ||
Sbjct 29193319 CACATTGTCAATCATATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGT 29193260
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 29193259 CTTAACGAATATCTGCAT 29193242
Score = 116 bits (128), Expect = 4e-21
Identities = 149/203 (73%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || || || || ||||| || | | ||| | | | |||||||||||||| |
Sbjct 29193667 GGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCA-TCCTCGAGCTGCTTCC 29193609
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| ||||||||||| || ||||| || |||||||| |||||| ||
Sbjct 29193608 CAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCT 29193549
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | |||||||| || ||| || || | ||| | ||| |||||||| || |
Sbjct 29193548 TCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGG 29193489
Query 133642 TTTTTACGAAAATCTGCATGGCT 133664
| || ||||| || |||||| ||
Sbjct 29193488 TCTTCACGAATATTTGCATGCCT 29193466
Score = 93.3 bits (102), Expect = 4e-14
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | | ||| ||| | ||||| ||||||||||
Sbjct 29193940 GGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCA-TCCTCAAGCTGCTTGC 29193882
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
| ||| | ||||| ||||||||||| || || || || |||||||| ||||||
Sbjct 29193881 CAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 29193827
>seq5
Length=38039368
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | ||||| ||||||||||| || |||||||| |||||
Sbjct 3286926 TCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTA 3286985
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || |||||| |||| |||||
Sbjct 3286986 TCTTGGATCTTAGCCTTGACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATA 3287045
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||||| || || || || ||||||||
Sbjct 3287046 GTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 3287080
>seq12
Length=23490084
Score = 91.5 bits (100), Expect = 1e-13
Identities = 80/97 (82%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| ||| ||| | | | ||||| |||||||||||
Sbjct 23214114 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCA-TCCTCCAGCTGCTTGCC 23214056
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559
||| | ||||| ||||||||||| ||||||||||||
Sbjct 23214055 GGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCT 23214019
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| ||| ||| | | | |||||||||||||| ||
Sbjct 16934303 GTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCA-TCCTCGAGCTGCTTCCC 16934245
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559
|||| | ||||| ||||||||||| || ||||| |||
Sbjct 16934244 CGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCT 16934208
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| ||| ||| | | | ||||| |||||||| ||
Sbjct 18639343 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCA-TCCTCCAGCTGCTTCCC 18639285
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559
|||| | ||||| ||||||||||| |||||||| |||
Sbjct 18639284 CGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCT 18639248
>seq6
Length=37594838
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| ||| |||| | | | ||||| |||||||| ||
Sbjct 8552834 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCA-TCCTCCAGCTGCTTCCC 8552776
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559
||| | ||||| ||||||||||| || ||||| |||
Sbjct 8552775 GGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 8552739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420727486880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |