Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq7 206 3e-48 seq9 190 2e-43 seq8 188 8e-43 seq11 170 2e-37 seq5 152 6e-32 seq1 140 4e-28 seq12 95.1 1e-14 seq6 82.4 9e-11 >seq7 Length=32884216 Score = 206 bits (228), Expect = 3e-48 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || ||||||||||| ||||| || ||||| ||||| Sbjct 29193470 ATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCC 29193529 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || ||||||||||||||||| || ||||||||| Sbjct 29193530 GACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 29193589 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| |||||||||| || ||||| |||||||| || Sbjct 29193590 CAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAAC 29193649 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||||||||| || || || ||| |||| || || || || Sbjct 29193650 ATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGG 29193696 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || |||||||| || ||||| ||||||||||| | Sbjct 29193971 ATGCAGATATTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCT 29194030 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || ||||| |||||||| || |||||||||||| Sbjct 29194031 GACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 29194090 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| || ||||| || |||||||| Sbjct 29194091 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAAC 29194150 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || ||| |||| || || ||||| Sbjct 29194151 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGG 29194197 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || |||||||| || || | ||||||||||| Sbjct 29193242 ATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCC 29193301 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| |||||||||| ||||||||||||||||| || ||||| |||||| Sbjct 29193302 GATATGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 29193361 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || ||||| ||||| || ||||||| ||||| || || || ||||| Sbjct 29193362 CAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAAC 29193421 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| | || || ||| | || ||||| || || Sbjct 29193422 ATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGG 29193468 Score = 145 bits (160), Expect = 9e-30 Identities = 125/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||||| || || |||||||||||||| ||||| |||||||||||||| || || Sbjct 29193815 AATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATC 29193874 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| || ||||||| ||| ||||| ||||| || || |||| ||||| Sbjct 29193875 TTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAG 29193934 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || || ||| |||| ||||| || || Sbjct 29193935 TCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGG 29193969 >seq9 Length=31548187 Score = 190 bits (210), Expect = 2e-43 Identities = 173/218 (79%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || || ||||||||||| | Sbjct 28421880 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCT 28421821 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| ||||||| || ||||||||||||||||| ||||| || |||||| Sbjct 28421820 GATACAATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCACCTGACCAG 28421761 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || |||||||| |||||||| ||||||| || ||||| || || || || Sbjct 28421760 CAACGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGCACCCTCGCGGATTACAAC 28421701 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| ||||| || || || ||| | || || Sbjct 28421700 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGCCT 28421663 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| ||||| |||||||||||||| Sbjct 28897758 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCGTCC 28897817 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || || |||||||||||||| || || || |||||| Sbjct 28897818 GACACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 28897877 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| || ||||||| || ||||| || || || || Sbjct 28897878 CAGCGTCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAAC 28897937 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || || || | || || || ||||| || Sbjct 28897938 ATCCAGAAGGAGTCCACACTCCACCTGGTGCTCCGCCTCCGTGGTGGCCA 28897987 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| || ||||||||||| ||||| Sbjct 28421652 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTTGAGGTCGAGTCCTCG 28421593 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || ||||||||||||||||||||||| || |||||| Sbjct 28421592 GACAAGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 28421533 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||||| ||||| || || || || || Sbjct 28421532 CAGCGCCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGACGTACACTGGCTGATTACAAC 28421473 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| | || || || | || || || ||||| Sbjct 28421472 ATTCAGAAGGAGTCCACCTTGCACCTGGTGCTCCGCCTCCGTGGTGG 28421426 Score = 161 bits (178), Expect = 1e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || |||||||| ||||| Sbjct 28897530 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 28897589 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 28897590 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 28897649 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || ||| | || ||||| || Sbjct 28897650 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCTGACTACAAC 28897709 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| ||||| ||||| ||||| || || Sbjct 28897710 ATCCAGAAGGAGTCCACCCTTCACCTGGT 28897738 Score = 122 bits (134), Expect = 1e-22 Identities = 175/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 64612 GTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCT 64671 ||||||||||| | || ||| | || || || || || ||||| || ||||| Sbjct 1132442 GTCGAGAAGGACCGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTGCGCCGCAAGGCC 1132501 Query 64672 GAATGGGCCATCCGGTGGATGAATCGTGGGTCGTCGTTTGGTC-AGCGTCTCGCAGCTTT 64730 || |||||||| || ||||| | || || || || | | |||| |||| || || Sbjct 1132502 GACTGGGCCATGCGATGGATCGA-CGGCGGCGAGCGCTTCGCCGAGCGCCTCGTCGCCTT 1132560 Query 64731 TGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAA 64790 ||||| || || || || ||||| || || |||||||| | || |||||||| || || Sbjct 1132561 CGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCATTCTGCGCCATCTTCTGGCTCAAGAA 1132620 Query 64791 GCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCT 64850 ||| || || ||||| || || | || || |||||||| ||||| || |||||||| || Sbjct 1132621 GCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCT 1132680 Query 64851 CCAC 64854 |||| Sbjct 1132681 CCAC 1132684 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||||| || || || ||||||||||| Sbjct 28919700 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 28919759 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518 || | ||||| ||| | ||||| || || |||||||||||||| || || || Sbjct 28919760 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCC 28919812 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27491 AAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGC 27550 || |||||||||| ||||| ||||| ||||||||||| | || ||||| || || |||| Sbjct 26865577 AACTTCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGC 26865636 Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATC 27610 |||| || |||| ||||| |||| || || || | || || || || || || ||| Sbjct 26865637 AACTGGAAGATGGACGTACATTAGCTGATTACAACATTCAGAAAGAGTCAACGCTCCATT 26865696 Query 27611 TAGTCTTGCGTCTTCGCGGTGGA 27633 | ||| || | || | |||||| Sbjct 26865697 TGGTCCTGAGGCTCAGGGGTGGA 26865719 >seq8 Length=30429317 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || |||||||||||||| Sbjct 25234641 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCA 25234700 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||||| || || ||||||||||||||||| || || |||||| Sbjct 25234701 GATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 25234760 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| ||||| |||| || || || || ||||| || Sbjct 25234761 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGGCGCACGCTTGCTGACTACAAC 25234820 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | || || || || || Sbjct 25234821 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGCCTCCGGGGAGG 25234867 Score = 187 bits (206), Expect = 3e-42 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || ||||||||||| || |||||||||||||| | Sbjct 25234869 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCT 25234928 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| || || |||||||||||||| ||||| || |||||| Sbjct 25234929 GATACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAG 25234988 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| |||||||||| || ||||| || Sbjct 25234989 CAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGNNNNNNNNNNGCTGACTACAAC 25235048 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| ||||| || || |||| || | |||||| Sbjct 25235049 ATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCGCCTAAGGGGTGGA 25235096 Score = 183 bits (202), Expect = 3e-41 Identities = 166/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || ||||| ||||| ||||| |||||||| ||||| | Sbjct 9003361 ATGCAGATTTTTGTCAAGACCCTGACCGGAAAGACCATTACGCTTGAGGTCGAGTCTTCT 9003302 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || ||||||||||||||||| || || || |||||| Sbjct 9003301 GATACAATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 9003242 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| || ||||| ||| Sbjct 9003241 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTGGCTGACTACAAT 9003182 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| ||||| || || ||||| ||||| Sbjct 9003181 ATCCAGAAGGAGTCTACCCTTCACCTAGT 9003153 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| | |||||||| || ||||| || ||||||||||| Sbjct 9003134 AATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCCTGGAGGTTGAGTCGTC 9003075 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | || || || ||||||||||||||| | ||||| || || || Sbjct 9003074 AGACACAATTGACAACGTAAAAGCAAAGATTCAGGACAAGGAGAGCATTCCCCCGGATCA 9003015 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || |||||||| ||||| |||||||||| || ||| ||||||| || || Sbjct 9003014 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGATTACAA 9002955 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| | || || || | ||||| |||||||| Sbjct 9002954 CATCCAGAAGGAGTCCACCTTGCACCTGGTGCTCCGTCTCCGCGGTGG 9002907 Score = 170 bits (188), Expect = 2e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || || ||||||||||| | Sbjct 9003589 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTAGAGGTTGAGTCCTCT 9003530 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || ||||||||||||||||| ||||| || |||||| Sbjct 9003529 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 9003470 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || |||||||| ||||| | || ||||| ||||| || || Sbjct 9003469 CAGCGCCTCATCTTTGCGGGCAAGCAACTTGAGGACGGGCGCACCCTCGCAGATTACAAC 9003410 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || || || ||||| ||||| || || Sbjct 9003409 ATTCAGAAAGAGTCCACCCTTCACCTTGT 9003381 Score = 170 bits (188), Expect = 2e-37 Identities = 178/232 (77%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| |||||||| ||||||||| || | Sbjct 25235325 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAG--AGCT 25235382 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| |||||||||| || ||||||||||| || ||||| ||||||| Sbjct 25235383 CCGATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACC 25235442 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| || || || || || ||||| || || |||| |||||||| || ||||| | Sbjct 25235443 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACA 25235502 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | | || ||||| || || || || || || | || || | ||||| || Sbjct 25235503 ACATTCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTCA 25235554 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || || || ||||| ||||| Sbjct 3435697 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCG 3435756 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || ||||||||||| || || || || |||||| Sbjct 3435757 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 3435816 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| || ||||| || Sbjct 3435817 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 3435876 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | || || ||||| || Sbjct 3435877 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTCCGCGGCGG 3435923 Score = 141 bits (156), Expect = 1e-28 Identities = 156/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| || || |||||||| ||||| || ||||||||| || Sbjct 25235096 AATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACAATTACCCTGGAGGTTGAG--AGC 25235153 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | || ||||||| || || ||||| |||||||| || || || ||| Sbjct 25235154 TCAGACACCATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGAC 25235213 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || || || ||||||||||| || ||||||| || ||||| || ||||| Sbjct 25235214 CAGCAGAGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTAC 25235273 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || | || ||||| || || || || Sbjct 25235274 AACATTCAGAAGGAGTCTACCCTACA 25235299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 146788 ACCACCTACTACCAGATGCAGACGCGCAGCGCCGACGAGCCGATGACGGCGTTCATCACC 146847 || |||||||||||| | ||||| || || |||||||||||||||||| ||||| | ||| Sbjct 5408568 ACTACCTACTACCAGCTCCAGACTCGGAGTGCCGACGAGCCGATGACGACGTTCGTGACC 5408509 Query 146848 TGCCTGAATTGCTCTAACCGCTGGAAGTGCT 146878 ||| |||| ||| || | |||||||| || Sbjct 5408508 TGCGTGAACTGCAACAATCACTGGAAGTTCT 5408478 >seq11 Length=27185770 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||| | || || |||||||| ||||| Sbjct 4344821 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCCTCG 4344762 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| || ||||| |||||| Sbjct 4344761 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCTCCTGACCAG 4344702 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| || ||||| || Sbjct 4344701 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAAC 4344642 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || ||||| || | ||||| || ||||| Sbjct 4344641 ATTCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGTCTCCGTGGTGG 4344595 >seq5 Length=38039368 Score = 152 bits (168), Expect = 6e-32 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | |||||||||||||| || || ||||| ||||| | Sbjct 3287080 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCCTCT 3287021 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | |||||||| || || || |||||||| || || || |||||| Sbjct 3287020 GACACCATCGATAATGTCAAGGCTAAGATCCAAGATAAGGAGGGCATCCCCCCGGACCAG 3286961 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || ||||||| | ||||| || ||||| || Sbjct 3286960 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAAC 3286901 Query 27586 GTCCAAAAGGAATC 27599 |||| ||||| || Sbjct 3286900 ATCCAGAAGGAGTC 3286887 >seq1 Length=46529941 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || || || ||||| ||||| Sbjct 14154413 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTCG 14154354 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 14154353 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAG 14154294 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||| | || ||||| || ||||| || Sbjct 14154293 CAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTACAAC 14154234 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | || || ||||| || Sbjct 14154233 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGG 14154187 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || || || ||||| ||| | Sbjct 27877738 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGAGCAGC 27877797 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || | ||||| || | |||||||||||||| || || || |||||| Sbjct 27877798 GACACGATCCAGAACATCAAGGCGAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCAG 27877857 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||| | || || || || ||||| || Sbjct 27877858 CAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAAC 27877917 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | || || ||||| || Sbjct 27877918 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGG 27877964 >seq12 Length=23490084 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || ||||| ||||||||||| || || || || || ||||| || ||||||| || Sbjct 23214020 GGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGC 23214079 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| ||||| || || || ||| | || || ||| Sbjct 23214080 ACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGCCTCCGC 23214139 Query 27628 GGTGG 27632 ||||| Sbjct 23214140 GGTGG 23214144 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || |||||||||||||| || || || || ||||| |||||||||| || Sbjct 16934209 GGTATCCCGCCGGACCAGCAGCGTCTCATCTTCGCGGGGAAGCAGCTCGAGGATGGCCGC 16934268 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || | || ||||| || || ||||| || || | || || ||| Sbjct 16934269 ACCCTGGCCGACTACAACATTCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGCCTCCGC 16934328 Query 27628 GGTGG 27632 ||||| Sbjct 16934329 GGTGG 16934333 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 ||||||||||| || || |||||||| || |||||| | || || || || ||||| || Sbjct 15023867 CAGGACAAGGAAGGGATCCCTCCAGATCAACAGCGTTTGATATTCGCCGGCAAGCAGCTG 15023926 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || |||| || || || || ||||| || | || ||||| || |||||||| Sbjct 15023927 GAAGATGGGCGCACACTGGCCGACTACAACATTCAGAAGGAGTCAACTCTTCA 15023979 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || ||||| ||||||||||| || || || || || ||||| || ||||||| || Sbjct 18639249 GGTATCCCTCCGGACCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTGGAGGATGGCCGC 18639308 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| || || || || || || | || || ||| Sbjct 18639309 ACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGC 18639368 Query 27628 GGTGG 27632 || || Sbjct 18639369 GGCGG 18639373 >seq6 Length=37594838 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 ||||| || || ||||||||||| || || || || || ||||| || ||||| | || Sbjct 7379131 GGAATCCCGCCGGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGACGC 7379072 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| ||||| || || || ||| | | || || Sbjct 7379071 ACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCAGGCTCCGT 7379012 Query 27628 GGTGG 27632 ||||| Sbjct 7379011 GGTGG 7379007 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || ||||||||||| || || || || || ||||| || ||||||| || Sbjct 8552740 GGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGAGGATGGCCGC 8552799 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || || ||||| || |||| ||||| ||||| ||||| || || | || || ||| Sbjct 8552800 ACGCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTTCACCTGGTGCTTCGCCTACGC 8552859 Query 27628 GGTGGACA 27635 || || || Sbjct 8552860 GGCGGCCA 8552867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310314453440