Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 212 1e-49 seq8 197 3e-45 seq9 194 4e-44 seq11 187 6e-42 seq1 176 1e-38 seq5 165 2e-35 seq12 109 1e-18 seq6 102 2e-16 seq10 95.1 3e-14 >seq7 Length=32884216 Score = 212 bits (234), Expect = 1e-49 Identities = 174/212 (82%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || ||||||||||| || |||||||| | ||||| Sbjct 29194182 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCC 29194123 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| ||||| | || ||||| ||| Sbjct 29194122 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 29194063 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||||||| |||||||| |||||||| ||| Sbjct 29194062 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTC 29194003 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 29194002 TTGCCAGTGAGGGTCTTCACGAATATCTGCAT 29193971 Score = 185 bits (204), Expect = 2e-41 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||||||||| | |||||||| || ||||||||||||||||| || Sbjct 29193466 TCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAG 29193407 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| | Sbjct 29193406 AGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGGGAT 29193347 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||| ||||| ||||| || || || | || ||| |||||||| Sbjct 29193346 GCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCATATCGGAGGACTCAACCTC 29193287 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 29193286 CAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 29193242 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || ||||||||||| || || |||||||| | ||||| Sbjct 29193681 AGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCC 29193622 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || || || ||||| || || | ||| ||||||||| Sbjct 29193621 TCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 29193562 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| ||| || ||||| || || || ||| Sbjct 29193561 TGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTC 29193502 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | ||||| Sbjct 29193501 TTGCCGGTGAGGGTCTTCACGAATATTTGCAT 29193470 Score = 163 bits (180), Expect = 7e-35 Identities = 137/168 (82%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||||||||| || |||||||| || |||||||| ||||| ||||| Sbjct 29193967 TCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAG 29193908 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||| || ||||||||||| |||||||| ||||| || ||||| || |||| Sbjct 29193907 GGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAAT 29193848 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA 211057 || ||||||||||||||||| ||||| || ||||| |||||||| Sbjct 29193847 ACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGA 29193800 >seq8 Length=30429317 Score = 197 bits (218), Expect = 3e-45 Identities = 171/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || || ||||| || || || ||||| | |||||| Sbjct 25235536 AGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 25235477 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| ||||| || ||||| || |||| |||||||||||| Sbjct 25235476 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 25235417 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| || ||||| |||||||| ||||| || ||| Sbjct 25235416 TGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTC 25235357 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 25235356 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 181 bits (200), Expect = 2e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || || ||||| | || || Sbjct 3435908 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 3435849 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || || | |||||||||||| Sbjct 3435848 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 3435789 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| ||| || ||||| || ||||| ||| Sbjct 3435788 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 3435729 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| || || | |||||| || Sbjct 3435728 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3435694 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || || |||||||| || || ||||| || | |||||| Sbjct 25234852 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCT 25234793 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | ||| ||||||||| Sbjct 25234792 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 25234733 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||| || ||| |||||||| || || || ||| Sbjct 25234732 TGGATCTTGGCCTTTACATTGTCAATGGTATCTGAGGACTCAACCTCAAGGGTTATGGTC 25234673 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| ||||| | |||||| Sbjct 25234672 TTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 25234641 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || ||||||||||| ||||||||||| || ||||| ||||| || ||||| | Sbjct 9003372 AGCCTAAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGC 9003431 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || || |||||||| || ||||| ||||| || |||||||| |||| || ||| Sbjct 9003432 CCGTCCTCAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCC 9003491 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| ||||| || || || || || ||||||||| |||||||| || || Sbjct 9003492 TTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTT 9003551 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| ||||| | |||||| Sbjct 9003552 ATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 9003589 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| || || |||||||| | ||||| Sbjct 25235308 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCC 25235249 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || | || ||||| || || | || ||||| ||| Sbjct 25235248 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 25235189 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| ||||| |||||||| || || || ||| Sbjct 25235188 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATTGTC 25235129 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||||||||| || || | ||||||| Sbjct 25235128 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 25235096 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || || |||||||| || ||||| || ||||| || || || || ||||| | | Sbjct 9003144 AGCCTGAGCACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGT 9003203 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || ||||||||||| |||||||| ||||| || ||||| || || | || ||| Sbjct 9003204 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCC 9003263 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| ||||| ||||| || ||||| || ||||| || ||||| || || Sbjct 9003264 TTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTA 9003323 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || || ||||| ||||| | |||||| Sbjct 9003324 ATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 9003361 Score = 149 bits (164), Expect = 1e-30 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| |||||||| || |||||||| || || || ||||| Sbjct 25235080 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCNNNNNNNNNNCCATCC 25235021 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| || |||| || ||||||||| Sbjct 25235020 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 25234961 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| || || || ||||| |||||||| || ||||| ||| Sbjct 25234960 TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTC 25234901 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | ||||| Sbjct 25234900 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 25234869 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | |||||||| || |||||||| ||||| || | ||| | ||||| Sbjct 9002922 AGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCCATCC 9002981 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || || || || |||| | ||||||||| Sbjct 9002982 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCC 9003041 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| ||| ||||| || || ||||| || |||||||| || || || || Sbjct 9003042 TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTT 9003101 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | ||||| ||||| | |||||| Sbjct 9003102 TTGCCGGTCAATGTCTTGACAAAGATTTGCATT 9003134 >seq9 Length=31548187 Score = 194 bits (214), Expect = 4e-44 Identities = 170/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| |||||||| ||||| | ||||| Sbjct 28421669 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCC 28421728 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || ||||| || ||||| |||||||| |||| || ||||||||| Sbjct 28421729 TCTAGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCC 28421788 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || || || || |||||| ||||||||||| ||||| ||| Sbjct 28421789 TGAATCTTGGCCTTCACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 28421848 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | |||||| Sbjct 28421849 TTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 28421880 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || || |||||||| |||||||| || |||||||| || || || | ||| | Sbjct 28897747 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGG 28897688 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| |||||||||||||| |||||||| || || || ||||| || || | || ||| Sbjct 28897687 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 28897628 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| |||||||| ||||| ||||| ||| || ||||| || ||| Sbjct 28897627 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 28897568 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || || ||||| || || | |||||| Sbjct 28897567 ATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 28897530 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | |||||||| || || ||||| ||||| || || || | |||||| Sbjct 28421441 AGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCC 28421500 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||||||| ||||| ||||| || ||||| || |||| ||| ||||||||| Sbjct 28421501 TCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 28421560 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||| |||| ||| || ||||| |||||||| ||| Sbjct 28421561 TGAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTC 28421620 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | ||||| ||||| | |||||| Sbjct 28421621 TTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 28421652 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| |||||||||||||| | ||||| Sbjct 28897969 AGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCC 28897910 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || || || ||||| || || | || ||||||||| Sbjct 28897909 TCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 28897850 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || || ||||| || |||||||| || || || ||| Sbjct 28897849 TGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTC 28897790 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 28897789 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 28897758 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || ||||| | || || || |||||||| || ||||| ||||| || | || | | Sbjct 26865709 AGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCTAATGTACGT 26865650 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||||||||| ||||| |||||||| || || | ||| ||||| || |||| || || Sbjct 26865649 CCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTCT 26865590 Query 211017 TTGTCCTG 211024 |||||||| Sbjct 26865589 TTGTCCTG 26865582 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || || || || |||||||| ||| ||||||||| Sbjct 28919803 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 28919744 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| ||||| | |||||| Sbjct 28919743 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 28919700 >seq11 Length=27185770 Score = 187 bits (206), Expect = 6e-42 Identities = 172/218 (79%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || |||||||| || || ||||| || || |||||||| | ||| || Sbjct 4344610 AGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCC 4344669 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||||||||| | || ||||||||| Sbjct 4344670 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCC 4344729 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| ||| || ||||| || ||||| | | Sbjct 4344730 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGAC 4344789 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || || || || ||||| ||||| | |||||| | ||| Sbjct 4344790 TTGCCGGTCAGGGTCTTCACAAAGATCTGCATCTGATG 4344827 Score = 91.5 bits (100), Expect = 3e-13 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||| | || ||||||| | | |||||||||||||||||||| ||||||| ||| Sbjct 4350686 AGGTGCTGCTGGTCAGAGCGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTCGTCG 4350745 Query 211047 ATGGTGTCAGA-GCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || | |||| |||||||| ||||| || | || || |||||||| || | Sbjct 4350746 ATCGTGTCGGATGGTTTC-ACCTCGAGGGTGATGGTGATGCCGGTCAGAGTCTTCACGAT 4350804 Query 211106 CACCTGCATTTTATGGTTA 211124 | ||||||||| || ||| Sbjct 4350805 GATCTGCATTTTCTGATTA 4350823 >seq1 Length=46529941 Score = 176 bits (194), Expect = 1e-38 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || ||||| | || || Sbjct 14154202 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 14154261 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 14154262 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 14154321 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| ||| || ||||| || ||||||||| Sbjct 14154322 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 14154381 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| || || | |||||| || Sbjct 14154382 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 14154416 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || || || | || || Sbjct 27877949 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCC 27877890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 27877889 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 27877830 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || | ||| || | ||| | ||| ||||| ||| || ||||| || ||||| ||| Sbjct 27877829 TGCACCTTCGCCTTGATGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTC 27877770 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 27877769 TTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 27877738 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || || || | || || Sbjct 27882380 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCC 27882321 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || |||| || || || || ||| |||| Sbjct 27882320 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCG 27882261 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||| | || ||||| |||| | ||| |||| || ||| |||| ||||| ||| Sbjct 27882260 TGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTC 27882201 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | || | || ||||| || || | |||||| || Sbjct 27882200 CTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 27882166 >seq5 Length=38039368 Score = 165 bits (182), Expect = 2e-35 Identities = 153/194 (79%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 210921 GACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCG 210980 ||||| || |||||||| || || ||||||||||| ||||| |||||||||||||| ||| Sbjct 3286887 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCG 3286946 Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040 ||||| || || || ||||| || || | || ||||| || |||||||| || || Sbjct 3286947 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACA 3287006 Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100 || ||||||||||||||| || |||||||| ||||| ||||| || || | ||||| Sbjct 3287007 TTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTC 3287066 Query 211101 ACAAACACCTGCAT 211114 ||||| | |||||| Sbjct 3287067 ACAAAGATCTGCAT 3287080 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || ||||||||||| ||||| Sbjct 3285958 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCC 3286017 Query 210963 TCCAGCTGCTTGCC 210976 |||||||||||||| Sbjct 3286018 TCCAGCTGCTTGCC 3286031 >seq12 Length=23490084 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || ||||| | ||||||||| ||||| || || ||||| || || || || || | Sbjct 15023994 AGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGC 15023935 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||||||||| ||||| || | || ||||| || ||||| | |||||| Sbjct 15023934 CCATCTTCCAGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCC 15023875 Query 211017 TTGTCCTG 211024 |||||||| Sbjct 15023874 TTGTCCTG 15023867 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || || ||||| | ||||| Sbjct 23214129 AGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 23214070 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||||||||| |||||||| ||||| || ||||| ||||| Sbjct 23214069 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 23214026 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || ||||| ||||||||||| ||| || ||||| Sbjct 16933300 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 16933241 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| || ||||| ||||| || || | |||||| || Sbjct 16933240 AGCGTGATCGTCTTCCCGGTGAGCGTCTTCACGAAGATCTGCATCTT 16933194 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || ||||| ||||||||||| ||| || ||||| Sbjct 18656312 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 18656253 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| ||||| || ||||| || || | |||||| || Sbjct 18656252 AGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 18656206 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || ||||| ||||||||||| ||| || ||||| Sbjct 18638632 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 18638573 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||| ||| ||||| || ||||| || || | |||||| || Sbjct 18638572 AGCGTGATCGACTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTT 18638526 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || || || ||||||||||| ||| || |||||| Sbjct 23213916 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 23213857 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 23213856 AGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 23213810 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || ||||| | ||||| Sbjct 18639358 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 18639299 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| || |||||||| ||||| || ||||| ||||| Sbjct 18639298 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGG 18639255 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || ||||| | || || Sbjct 18657035 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCA 18656976 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| || |||||||| ||||| || ||||| || || Sbjct 18656975 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 18656932 >seq6 Length=37594838 Score = 102 bits (112), Expect = 2e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || || ||||| ||||| || |||||||| || |||||||| || || || ||||| Sbjct 7379012 ACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 7379071 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| || ||||||||||| || |||||||| || || || ||||| || || | ||| Sbjct 7379072 GCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCC 7379131 Query 211013 TTCC 211016 | || Sbjct 7379132 TGCC 7379135 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || || || || | ||||| Sbjct 8552849 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 8552790 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| || |||||||| ||||| || ||||| || || Sbjct 8552789 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8552746 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || || || ||||||||||| ||| || |||||| Sbjct 7379218 CCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTCCACCTCG 7379277 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 7379278 AGGGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 7379324 >seq10 Length=28350858 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||||||||| || || || ||||||||||| ||| || |||||| Sbjct 16401708 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 16401767 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 16401768 AGGGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 16401814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151821780380