Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 183 3e-41 seq1 183 3e-41 seq11 145 7e-30 seq7 143 2e-29 seq9 132 4e-26 seq6 118 1e-21 seq10 113 4e-20 seq12 109 5e-19 seq5 95.1 1e-14 >seq8 Length=30429317 Score = 183 bits (202), Expect = 3e-41 Identities = 182/233 (78%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | ||| || || || ||| ||||||||| ||||| ||||||| Sbjct 3435925 CGCCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3435866 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| |||||||||||||||||||| || |||||||| ||||||| || Sbjct 3435865 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 3435806 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | ||||||||| ||| || |||| ||| | | | ||||| |||||| Sbjct 3435805 GGATCCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTCC 3435747 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 3435746 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3435694 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||||| |||| ||| ||||||||| ||||| || || | Sbjct 9002906 GCCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGC 9002965 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || |||||||||||||| || || ||||||||||| || |||| ||| Sbjct 9002966 TAAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGG 9003025 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || ||||||||||||| ||| | ||||||| ||| | | | ||||| |||||| | Sbjct 9003026 AATGCTCTCCTTGTCC-TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAA 9003084 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || ||||| || |||| ||||| || || || ||||| Sbjct 9003085 CCTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 9003133 Score = 136 bits (150), Expect = 4e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || ||||||||| || || ||||| | |||||||| |||| || Sbjct 9003152 CACTAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTC 9003211 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||||||||| || |||||||| ||||||| ||| | || |||||||||| | Sbjct 9003212 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-T 9003270 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | || | | | || || ||||| ||||| | ||| || || | Sbjct 9003271 GAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCT 9003330 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||| ||||| || |||||||||||| Sbjct 9003331 TTCCGGTCAGGGTCTTGACAAAAATCTGCATG 9003362 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || || ||||||||||||||| ||||||| |||||| || Sbjct 25235542 AGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGG 25235483 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||||||||| ||||||||||| ||||| | ||||| | ||| Sbjct 25235482 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCC 25235423 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || |||| || | | | || ||| ||| ||||||| || Sbjct 25235422 TTGTCCTGGATCTTAGCCTTC-ACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGT 25235364 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| ||||| |||||||| Sbjct 25235363 AATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25235325 Score = 120 bits (132), Expect = 3e-22 Identities = 162/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||| || || || ||||||||||||||| ||||||| |||||||| Sbjct 25235314 AGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGG 25235255 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || ||||| || || | ||| ||||||| ||| | || |||| Sbjct 25235254 CCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCC 25235195 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 || ||| ||| || |||| ||| | | | ||||| ||| ||| ||||||| Sbjct 25235194 TTATCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCTGAGCT---CTCAACCTCCAG 25235139 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || ||||| |||||||||||||| Sbjct 25235138 GGTAATTGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 25235097 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||| ||||||||||| || || | |||||||||| |||| || Sbjct 9003380 CACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCGTCCTC 9003439 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 || |||||||| || || || |||||||| ||||| | |||| | |||||||||| | Sbjct 9003440 AAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC-T 9003498 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | || | | | ||||| ||||| ||||| | ||||| || | Sbjct 9003499 GAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCT 9003558 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| || || |||||||| Sbjct 9003559 TGCCAGTGAGTGTCTTCACAAAGATCTGCAT 9003589 Score = 104 bits (114), Expect = 2e-17 Identities = 98/124 (79%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | |||||| || ||||| ||||||||| ||||| |||||| Sbjct 22660044 CCGCCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 22660103 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || ||||| |||| || |||||||| || ||||| || || ||||| || ||| || Sbjct 22660104 GCCAGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATCCGGC 22660163 Query 41752 GGGA 41755 |||| Sbjct 22660164 GGGA 22660167 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| |||||||| ||||| ||||| | Sbjct 25234868 GCCTCCCCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 25234809 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || |||||| | || |||||||||||||| ||||| || || ||||| ||||||| || Sbjct 25234808 AAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 25234749 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| || | || || | || | | | || || ||||| | Sbjct 25234748 GATTCCCTCCTTGTCC-TGGATCTTGGCCTTTACATTGTCAATGGTATCTGAGGACTCAA 25234690 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||||| || || || || || ||||| || || |||||||| Sbjct 25234689 CCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 25234641 Score = 100 bits (110), Expect = 3e-16 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 25235095 CCACCCCTTAGGCGCAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCN 25235036 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || |||||||||||||| || || ||||| ||||| ||||||| |||| Sbjct 25235035 NNNNNNNNNCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 25234976 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | ||||| | |||| | | | ||| || ||||| || Sbjct 25234975 ATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAAC 25234917 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || |||| ||||| || || || |||||| Sbjct 25234916 CTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATG 25234868 >seq1 Length=46529941 Score = 183 bits (202), Expect = 3e-41 Identities = 184/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 14154185 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 14154244 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCG 41752 |||||||||| |||| || ||||||||||||||||| || || ||||| ||||| ||| Sbjct 14154245 CGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCG 14154304 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| | | |||||||||| ||| || |||| ||| | | | ||||| ||||| Sbjct 14154305 GGATC-CCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTC 14154362 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| ||||| || |||||||| ||||| ||||| |||||||| || Sbjct 14154363 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 14154416 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| |||||||| ||||||||| ||||| ||||||| Sbjct 27877965 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 27877906 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || |||||| |||| || ||||||||||||||||| || || ||||| |||||| |||| Sbjct 27877905 CAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 27877846 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 || | | |||||||||| | || ||| | | | |||||||| ||||| Sbjct 27877845 GATC-CCCTCCTTGTCCTGCACCTTCGCCTTGATGTTCTGGATCGTGTCGCTGCTCTCCA 27877787 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| ||| || || || |||||||| ||||| ||||| |||||||| Sbjct 27877786 CCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 27877738 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||| ||| || || | ||| || |||||||| ||||||||| ||||| ||||||| Sbjct 27882396 GCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 27882337 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || ||||||||||||||||| || || ||||| |||| || || Sbjct 27882336 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGG 27882277 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 |||| |||| |||| ||| | ||| | | || | ||||| || || Sbjct 27882276 GACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGAC 27882217 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | | | ||| || || | || |||| ||||| ||||| |||||||| || Sbjct 27882216 CACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 27882166 >seq11 Length=27185770 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||| ||||| || ||| ||||||||||||||| ||||| | Sbjct 4344594 GCCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 4344653 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||||||||| || |||||||| ||||| | || Sbjct 4344654 AAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGG 4344713 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || |||| ||| | | | ||||| ||||||| Sbjct 4344714 GATCCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTCCA 4344772 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || | || || ||||| ||||| || || |||||||| Sbjct 4344773 CCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4344821 >seq7 Length=32884216 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||||||||||| Sbjct 29194197 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 29194138 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || |||||||| ||||| | || Sbjct 29194137 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 29194078 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 29194077 ATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCAGAGGACTCAAC 29194019 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 29194018 CTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAATATCTGCAT 29193971 Score = 122 bits (134), Expect = 8e-23 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| ||||||||| |||||||| || | Sbjct 29193469 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGC 29193410 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || ||| | || || ||||||||||| ||||| || ||||| || ||||||| || Sbjct 29193409 GAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGG 29193350 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA--CAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || || | || | || || | ||| ||||| Sbjct 29193349 GATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACATTGTCAATCA-TATCGGAGGACTCA 29193292 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| ||||| |||||||| Sbjct 29193291 ACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 29193242 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | || || ||||| ||| ||||| || ||||| ||||| | Sbjct 29193696 CCGCCCCGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCA 29193637 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || || || || || ||||| ||||| | || Sbjct 29193636 AGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 29193577 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||||| | | || | |||||| ||||| | Sbjct 29193576 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCG--ATCGTGTCGGAGGACTCGA 29193519 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || || || || || || || ||||| ||||| || |||||| Sbjct 29193518 CCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCATG 29193469 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||| || || | Sbjct 29193969 CCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 29193910 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 29193909 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 29193850 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 | | |||||||||| ||| || ||||| Sbjct 29193849 ATACCCTCCTTGTCCTGGATCTTGGCCTTCA 29193819 >seq9 Length=31548187 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| ||||| ||||| | | |||||| | || || Sbjct 28897738 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCC 28897679 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || ||||| ||||||| ||| | | |||||||||| | Sbjct 28897678 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 28897619 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || |||| ||| | | | ||||| ||||| ||||| | ||| || || || Sbjct 28897618 ATCTTGGCCTTC-ACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTT 28897560 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| ||||| |||||||| Sbjct 28897559 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 28897530 Score = 120 bits (132), Expect = 3e-22 Identities = 179/250 (72%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 41616 CAAATCATC-GTACATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCC 41674 |||| |||| | || | | ||| || || || || | |||||| |||| ||| |||| Sbjct 28421405 CAAAACATCTGAACCTACCGGCCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCC 28421464 Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||||||||| || || | || || || | || |||||||||||||| || || || Sbjct 28421465 TTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTCGAGCTGCTTGCCTGCAAAGATG 28421524 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 |||||||| ||||||| ||||| | |||||||||| ||| | || || | || | | Sbjct 28421525 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTGTC 28421583 Query 41795 -ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 | |||| ||||| ||||| | || || || || || |||| ||||| || || Sbjct 28421584 GATCTTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAA 28421643 Query 41854 AATCTGCATG 41863 ||||||||| Sbjct 28421644 GATCTGCATG 28421653 >seq6 Length=37594838 Score = 118 bits (130), Expect = 1e-21 Identities = 100/122 (82%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||||||||| || | |||||| || |||||| ||||||||| ||||| ||||||| Sbjct 8552865 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 8552806 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || ||||| | || || |||||||| |||||||| || |||||||| |||||| |||| Sbjct 8552805 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8552746 Query 41754 GA 41755 || Sbjct 8552745 GA 8552744 >seq10 Length=28350858 Score = 113 bits (124), Expect = 4e-20 Identities = 100/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | ||| || |||||||| ||||||||| ||||| |||||| Sbjct 16401387 CCGCCGCCGCGGAGGCGAAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 16401446 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || || || |||| || |||||||| |||||||| ||||| ||||| |||||| || Sbjct 16401447 GCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGC 16401506 Query 41752 GGGA 41755 |||| Sbjct 16401507 GGGA 16401510 >seq12 Length=23490084 Score = 109 bits (120), Expect = 5e-19 Identities = 98/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| || ||||| ||||||||||||||| ||||||| Sbjct 16934334 GCCACCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGC 16934275 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 |||||||| | || ||||||||||| || ||||| || || ||||| |||||| |||| Sbjct 16934274 CAGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGG 16934215 Query 41754 GA 41755 || Sbjct 16934214 GA 16934213 Score = 105 bits (116), Expect = 6e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || |||||| ||||||||| ||||| ||||||| Sbjct 23214145 GCCACCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 23214086 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 |||||||| | || || ||||||||||||||||| || |||||||| ||||||| Sbjct 23214085 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCG 23214030 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||||| || |||||| | || || ||||||||||||||||| Sbjct 15023968 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 15023909 Query 41731 TATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCC 41770 ||||| |||||||| || | |||| | || ||||||||| Sbjct 15023908 TATCAAACGCTGTTGATCTGGAGGGATCCCT-TCCTTGTCC 15023869 >seq5 Length=38039368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||| | ||||| | | || || ||||||||||| ||||| Sbjct 3286889 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3286948 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT----TTG-CTTC 41785 || || ||||| ||||||| ||| | || |||||| || ||| || ||| | | Sbjct 3286949 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3287008 Query 41786 AACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTC 41845 | ||| | ||||| ||||||||||| | || || || || || |||| ||| Sbjct 3287009 ATCGATG-----GTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 3287063 Query 41846 TTTACGAAAATCTGCAT 41862 || || || |||||||| Sbjct 3287064 TTCACAAAGATCTGCAT 3287080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303930654400