Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq11 84.2 2e-11
>seq11
Length=21200727
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815
||||||||||||||| | || | ||||||||| |||||||| ||||| || || |
Sbjct 12983309 ACATGAGCAATCATGTATGTCAGAAGAGAATATGATGCAATGTTGAATGGAACACCAAGT 12983368
Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874
||||||||||| || | |||||||| || || || |||| || || || ||||||||
Sbjct 12983369 CCCATATCAGCAGAGCGTTGATACATCTGGCATGATAGCTCCCCGCTCTCA-ACATAAAA 12983427
Query 101875 TTG 101877
||
Sbjct 12983428 CTG 12983430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361208546167688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |