Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 6e-13 >seq8 Length=23026653 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 151002 CGCGGC--CGCCG-TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCA 151058 |||||| ||||| | |||| || || | | ||||| |||||| | ||| | | | Sbjct 2346446 CGCGGCGTCGCCGGTGTTCACCGGGCCGACGTTCTACCAGCGGCTCCACCACATGGCCGA 2346505 Query 151059 GGACAAGGCCACGGTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGA 151118 |||||||| || | | || | |||| | | | ||||| |||||| | || Sbjct 2346506 GGACAAGGTCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGA 2346565 Query 151119 GGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGC 151178 || |||| || ||| ||| |||||||||||||||||||||||||||||||| |||| Sbjct 2346566 GGACCGCCGCCGGTACGGTGGCGTCAAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGC 2346625 Query 151179 GCACGGCGCGGCC 151191 |||||||| ||| Sbjct 2346626 CCACGGCGCCGCC 2346638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608723074707520