Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 6e-13
>seq8
Length=23026653
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 151002 CGCGGC--CGCCG-TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCA 151058
|||||| ||||| | |||| || || | | ||||| |||||| | ||| | | |
Sbjct 2346446 CGCGGCGTCGCCGGTGTTCACCGGGCCGACGTTCTACCAGCGGCTCCACCACATGGCCGA 2346505
Query 151059 GGACAAGGCCACGGTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGA 151118
|||||||| || | | || | |||| | | | ||||| |||||| | ||
Sbjct 2346506 GGACAAGGTCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGA 2346565
Query 151119 GGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGC 151178
|| |||| || ||| ||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2346566 GGACCGCCGCCGGTACGGTGGCGTCAAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGC 2346625
Query 151179 GCACGGCGCGGCC 151191
|||||||| |||
Sbjct 2346626 CCACGGCGCCGCC 2346638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608723074707520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |