Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 3e-28
seq4 122 7e-23
seq2 122 7e-23
seq5 116 3e-21
seq8 109 5e-19
seq1 96.9 3e-15
seq9 89.7 4e-13
>seq6
Length=30401905
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| ||||| ||||||||||| |||||||| || || |||
Sbjct 26903083 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 26903024
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||| ||||| ||||| ||| | || || | |||||||||| |||
Sbjct 26903023 AGGGTGCGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 26902964
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | ||| |||||| | |||
Sbjct 26902963 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACC 26902904
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||||||||||||||||| | || |||||||| || |||||
Sbjct 26902903 TCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017
||||||||||| | || | ||||||||||| || ||||| ||||| |||||||| ||
Sbjct 27218352 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 27218293
Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077
| ||||| ||||| ||||| || | || || | |||||||||| ||| | ||| |||
Sbjct 27218292 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 27218233
Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137
||||| |||||| || || | | | | || || || ||| || | |||
Sbjct 27218232 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 27218173
Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||||||||| | || || ||||| || |||||
Sbjct 27218172 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 27218135
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| || ||||| ||||| || | ||||| || || |||||
Sbjct 26902597 GTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCA 26902538
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | |||||||| || | ||| |||||||| ||||| |||
Sbjct 26902537 GCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTC 26902478
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | |||||| || ||| || | ||| ||||||||||| || | ||
Sbjct 26902477 ACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTC 26902418
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 26902417 TTCACAAAGATCTGCAT 26902401
>seq4
Length=32292456
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| ||||||||||| || ||||||||||| ||
Sbjct 28749987 CCTCCACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCA 28749928
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | ||||||||| ||
Sbjct 28749927 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGG 28749868
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | | ||| || ||| || |||
Sbjct 28749867 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACC 28749808
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 28749807 TCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 28749761
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| ||||||||||| || ||||||||||| ||
Sbjct 28750215 CCTCCACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCA 28750156
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | ||||||||| ||
Sbjct 28750155 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGG 28750096
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | | ||| || || || |||
Sbjct 28750095 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACC 28750036
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| | || || || || || |||||
Sbjct 28750035 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| ||||||||||| || ||||||||||| ||
Sbjct 28750443 CCTCCACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCA 28750384
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | ||||||||| ||
Sbjct 28750383 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGG 28750324
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | | ||| || || || |||
Sbjct 28750323 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACC 28750264
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| | || || || || || |||||
Sbjct 28750263 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||||| ||||||||||| || |||||||| |||||
Sbjct 28749531 CCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCG 28749472
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||| ||||| ||||| || | ||||| | |||||||||| ||
Sbjct 28749471 AGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 28749412
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || ||||| ||||| | | | | ||||| || |||
Sbjct 28749411 ATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACC 28749352
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181
|||| ||| ||||||||||| || | || || || ||||| ||||| | |||
Sbjct 28749351 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCATCTGGAA 28749299
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
|||| ||||| |||||||| ||||| ||||| || ||||| || | ||||| |||||
Sbjct 28749735 TGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGC 28749676
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || ||| | || || | ||||||||| || | || |||||||| ||||||
Sbjct 28749675 TTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTG 28749616
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
||||| | ||| || ||| | ||| |||| ||||||||||||||||||
Sbjct 28749615 GCCTTCACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTG 28749556
Query 21153 AACGTTTTGACAAATATTTGCAT 21175
| || || || |||||||||||
Sbjct 28749555 AGGGTCTTCACGAATATTTGCAT 28749533
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || |||||||| || | || | ||||||||||| || ||||| ||||| |||
Sbjct 3242635 CCACCACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 3242694
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062
||||| | ||||||||||||| || || || | || || | ||||||||||
Sbjct 3242695 AGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCC 3242748
>seq2
Length=36083738
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || ||||| | | ||||||||||| |||||
Sbjct 2263005 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2263064
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | |||||||||| ||| | ||| |||||||| |||||| ||
Sbjct 2263065 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2263124
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| || |||| || | ||| || ||||||||||| || ||
Sbjct 2263125 ACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 2263184
Query 21159 TTGACAAATATTTGCAT 21175
|| ||||| || |||||
Sbjct 2263185 TTCACAAAGATCTGCAT 2263201
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||||||||||| || ||||| ||||| ||
Sbjct 2262430 CCACCACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 2262489
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||||||||| ||||| ||| | || || | |||||||||| |||
Sbjct 2262490 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 2262549
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | |||
Sbjct 2262550 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACC 2262609
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| ||||||||||| || | || |||||||| || |||||
Sbjct 2262610 TCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2262656
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || ||||| | | ||||||||||| |||||
Sbjct 2262777 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2262836
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | ||||||||| ||| | ||| |||||||| |||||| ||
Sbjct 2262837 GCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2262896
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| | |||| || | ||| |||||||||||||| | ||
Sbjct 2262897 ACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTC 2262956
Query 21159 TTGACAAATATTTGCAT 21175
||||| || || |||||
Sbjct 2262957 TTGACGAAGATCTGCAT 2262973
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | ||||||||||| || ||||| ||||| |||
Sbjct 2262202 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2262261
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||||||||| ||||| || | || || | ||||||||| |||
Sbjct 2262262 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 2262321
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | | || || | |||
Sbjct 2262322 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 2262381
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || || || || || || || |||||
Sbjct 2262382 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
>seq5
Length=25164199
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
|||||||| || | || |||||||| |||||||| ||||| || ||||| || | ||
Sbjct 21087695 GAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATC 21087754
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
||||||||| ||||| ||| | || |||||||||||||| ||| | ||| ||||| ||
Sbjct 21087755 CTCCAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 21087814
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|||||| ||||| | | | || || | ||| || | |||||| ||
Sbjct 21087815 CTGGATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGT 21087874
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||||| || | || |||||||| || ||||||
Sbjct 21087875 CTTGCCAGTGAGTGTCTTGACAAAAATCTGCATT 21087908
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | ||||||||||| || ||||| ||||| ||
Sbjct 3097263 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3097322
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | |||||||||| |||
Sbjct 3097323 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3097382
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| ||||| | | ||| || || || ||||
Sbjct 3097383 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3097442
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| || |||||||| || || | || || || || || ||||| |||
Sbjct 3097443 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3097493
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
|||||||| || | ||||||||||| |||||||| ||||| || ||||| || | ||
Sbjct 21087467 GAGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATC 21087526
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|||||||| ||||| || | || || | ||||||||| ||| | |||||||| ||
Sbjct 21087527 TTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATC 21087586
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|||||| ||||| | | ||| || || | ||| |||| ||||||||
Sbjct 21087587 CTGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGT 21087646
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||| || | || |||||||| || |||||
Sbjct 21087647 CTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 21087679
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || |||||| | ||||||||||||| |||||
Sbjct 21087939 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCA 21087998
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| ||||||| | ||||||||| ||| | ||| |||||||| |||||| ||
Sbjct 21087999 GCAAAAATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTG 21088058
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || | ||| || | |||||||||||||| || | ||
Sbjct 21088059 ACGTTGTCGATCGTGTCTGATGACTCGACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTC 21088118
Query 21159 TTGACAAATATTTGCATT 21176
|| || || || ||||||
Sbjct 21088119 TTCACGAAGATCTGCATT 21088136
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || ||||| | ||||| ||||| |||||
Sbjct 21088167 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 21088226
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | |||||||||| ||| | || |||||||| ||||||| ||
Sbjct 21088227 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 21088286
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | |||||| | ||| || | ||| || |||||||| || || ||
Sbjct 21088287 ACGTTGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 21088346
Query 21159 TTGACAAATATTTGCAT 21175
|||||||| ||||||||
Sbjct 21088347 TTGACAAAGATTTGCAT 21088363
>seq8
Length=23026653
Score = 109 bits (120), Expect = 5e-19
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 4124550 CCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 4124609
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAG--TCTCTGCTGGTCCACGG 21066
||||| | | ||||| ||||| ||||| || | || || ||||||||||| ||
Sbjct 4124610 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGG 4124669
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| ||| |||||||| ||||||| ||||| | | ||| || || | ||||
Sbjct 4124670 AAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCA 4124729
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||| ||||||||| | || || ||||| || |||||
Sbjct 4124730 CCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 4139814 CCACCACGGAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 4139873
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||| ||||| ||||| || | || || | ||||||||| ||
Sbjct 4139874 AGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 4139933
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | ||| || || || ||||
Sbjct 4139934 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACC 4139993
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||| ||||||||| | || || ||||| || |||||
Sbjct 4139994 TCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 4140040
>seq1
Length=43445878
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | || |||||||| || ||||| ||||| ||
Sbjct 9972253 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9972194
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||||||||| ||||| || | || || | ||||||||| ||
Sbjct 9972193 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9972134
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | ||| || || || ||||
Sbjct 9972133 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9972074
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| || || ||||| || || | || || || || || ||||| |||
Sbjct 9972073 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 9972023
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | || |||||||| || ||||| ||||| ||
Sbjct 9981461 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9981402
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||||||||| ||||| || | || || | ||||||||| ||
Sbjct 9981401 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9981342
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | ||| || || || ||||
Sbjct 9981341 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9981282
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|||| || || ||||| || || | || || || || || ||||| |||
Sbjct 9981281 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 9981231
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| |||| || |||||||| || ||||| ||||| |||
Sbjct 21648076 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21648135
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||||||||| ||||| || | || || | |||||||||| ||
Sbjct 21648136 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21648195
Query 21069 ACGCCTTCCTTGTC 21082
| || ||||||||
Sbjct 21648196 ATCCCCTCCTTGTC 21648209
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014
|| || | |||||| | |||| || |||||||| || ||||| ||||| ||||| ||
Sbjct 21638765 CGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTG 21638824
Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074
|| ||||||||||||| ||||| || | || || | |||||||| | || |||||
Sbjct 21638825 CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCC 21638884
Query 21075 TCCTTGTCGGCGATC 21089
||| ||||| ||||
Sbjct 21638885 TCCCTGTCGTGGATC 21638899
>seq9
Length=22605696
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| |||| || |||||||| || ||||| ||||| |||
Sbjct 15391468 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15391409
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062
||||| || | ||||||||||| || ||||| | || || | ||||||||||
Sbjct 15391408 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCC 15391355
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| |||| || |||||||| || ||||| ||||| |||
Sbjct 15402875 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15402816
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062
||||| || | ||||||||||| || ||||| | || || | ||||||||||
Sbjct 15402815 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCC 15402762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422209342800608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |